RNA–Protein interactions for RNA: ENST00000504579.5

CANX-208, Transcript of calnexin, human

TSL 4

Gene CANX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CANX-208	ENST00000504579	LRRC59	Q96AG4	307 aa	Known RBP	33.89	■■■■□ 3.02
CANX-208	ENST00000504579	CFAP70	Q5T0N1	1121 aa		33.88	■■■■□ 3.01
CANX-208	ENST00000504579	CDC42BPG	Q6DT37	1551 aa		33.88	■■■■□ 3.01
CANX-208	ENST00000504579	KNDC1	Q76NI1	1749 aa		33.87	■■■■□ 3.01
CANX-208	ENST00000504579	PLEKHH1	Q9ULM0	1364 aa		33.87	■■■■□ 3.01
CANX-208	ENST00000504579	LAMC1	P11047	1609 aa		33.84	■■■■□ 3.01
CANX-208	ENST00000504579	MEX3C	Q5U5Q3	659 aa	Known RBP	33.83	■■■■□ 3.01
CANX-208	ENST00000504579	SIRT1	Q96EB6	747 aa		33.83	■■■■□ 3.01
CANX-208	ENST00000504579	DHX57	Q6P158	1386 aa	Known RBP	33.81	■■■■□ 3
CANX-208	ENST00000504579	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.8	■■■■□ 3
CANX-208	ENST00000504579	NUTM2E	B1AL46	878 aa	Predicted RBP	33.8	■■■■□ 3
CANX-208	ENST00000504579	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.8	■■■■□ 3
CANX-208	ENST00000504579	PNPLA6	Q8IY17	1366 aa		33.8	■■■■□ 3
CANX-208	ENST00000504579	SOS2	Q07890	1332 aa	Predicted RBP	33.79	■■■■□ 3
CANX-208	ENST00000504579	ESCO1	Q5FWF5	840 aa		33.77	■■■■□ 3
CANX-208	ENST00000504579	DCAF11	Q8TEB1	546 aa		33.76	■■■□□ 2.99
CANX-208	ENST00000504579	KDM2A	Q9Y2K7	1162 aa		33.75	■■■□□ 2.99
CANX-208	ENST00000504579	NUTM2F	A1L443	756 aa		33.72	■■■□□ 2.99
CANX-208	ENST00000504579	STAC3	Q96MF2	364 aa		33.72	■■■□□ 2.99
CANX-208	ENST00000504579	ADGRB1	O14514	1584 aa		33.72	■■■□□ 2.99
CANX-208	ENST00000504579	ZNF772	Q68DY9	489 aa	Predicted RBP	33.71	■■■□□ 2.99
CANX-208	ENST00000504579	PRAM1	Q96QH2	718 aa		33.7	■■■□□ 2.99
CANX-208	ENST00000504579	NPHP3	Q7Z494	1330 aa		33.7	■■■□□ 2.99
CANX-208	ENST00000504579	DLC1	Q96QB1	1528 aa		33.68	■■■□□ 2.98
CANX-208	ENST00000504579	FMN2	Q9NZ56	1722 aa		33.67	■■■□□ 2.98
CANX-208	ENST00000504579	FOXO3	O43524	673 aa		33.67	■■■□□ 2.98
CANX-208	ENST00000504579	PXDN	Q92626	1479 aa		33.65	■■■□□ 2.98
CANX-208	ENST00000504579	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.64	■■■□□ 2.98
CANX-208	ENST00000504579	AFF2	P51816	1311 aa		33.62	■■■□□ 2.97
CANX-208	ENST00000504579	POGK	Q9P215	609 aa		33.62	■■■□□ 2.97
CANX-208	ENST00000504579	XPC	Q01831	940 aa	Predicted RBP	33.61	■■■□□ 2.97
CANX-208	ENST00000504579	C8orf37	Q96NL8	207 aa		33.61	■■■□□ 2.97
CANX-208	ENST00000504579	TRAK1	Q9UPV9	953 aa		33.61	■■■□□ 2.97
CANX-208	ENST00000504579	ADAMTS2	O95450	1211 aa		33.58	■■■□□ 2.97
CANX-208	ENST00000504579	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.57	■■■□□ 2.96
CANX-208	ENST00000504579	KIF1A	Q12756	1690 aa		33.55	■■■□□ 2.96
CANX-208	ENST00000504579	ADGRB2	O60241	1585 aa		33.53	■■■□□ 2.96
CANX-208	ENST00000504579	PHF8	Q9UPP1	1060 aa		33.53	■■■□□ 2.96
CANX-208	ENST00000504579	RXRB	P28702	533 aa		33.52	■■■□□ 2.96
CANX-208	ENST00000504579	NGLY1	Q96IV0	654 aa		33.51	■■■□□ 2.95
CANX-208	ENST00000504579	KRT28	Q7Z3Y7	464 aa		33.49	■■■□□ 2.95
CANX-208	ENST00000504579	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.49	■■■□□ 2.95
CANX-208	ENST00000504579	ANKAR	Q7Z5J8	1434 aa		33.48	■■■□□ 2.95
CANX-208	ENST00000504579	RGPD8	O14715	1765 aa	Predicted RBP	33.48	■■■□□ 2.95
CANX-208	ENST00000504579	SPATA31A3	Q5VYP0	1347 aa		33.48	■■■□□ 2.95
CANX-208	ENST00000504579	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.48	■■■□□ 2.95
CANX-208	ENST00000504579	QTRT2	Q9H974	415 aa	Known RBP	33.46	■■■□□ 2.95
CANX-208	ENST00000504579	USP32	Q8NFA0	1604 aa		33.46	■■■□□ 2.95
CANX-208	ENST00000504579	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.44	■■■□□ 2.94
CANX-208	ENST00000504579	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.43	■■■□□ 2.94
CANX-208	ENST00000504579	WASL	O00401	505 aa	Predicted RBP	33.41	■■■□□ 2.94
CANX-208	ENST00000504579	PSME1	Q06323	249 aa		33.41	■■■□□ 2.94
CANX-208	ENST00000504579	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.4	■■■□□ 2.94
CANX-208	ENST00000504579	EIF3A	Q14152	1382 aa	Known RBP	33.4	■■■□□ 2.94
CANX-208	ENST00000504579	PRR36	Q9H6K5	1346 aa		33.4	■■■□□ 2.94
CANX-208	ENST00000504579	RBM6	P78332	1123 aa	Known RBP	33.4	■■■□□ 2.94
CANX-208	ENST00000504579	PMFBP1	Q8TBY8	1022 aa		33.4	■■■□□ 2.94
CANX-208	ENST00000504579	USP21	Q9UK80	565 aa		33.4	■■■□□ 2.94
CANX-208	ENST00000504579	KIAA1210	Q9ULL0	1709 aa		33.39	■■■□□ 2.94
CANX-208	ENST00000504579	TNS3	Q68CZ2	1445 aa		33.38	■■■□□ 2.93
CANX-208	ENST00000504579	TULP4	Q9NRJ4	1543 aa		33.38	■■■□□ 2.93
CANX-208	ENST00000504579	SBNO1	A3KN83	1393 aa		33.37	■■■□□ 2.93
CANX-208	ENST00000504579	NBPF1	Q3BBV0	1214 aa		33.37	■■■□□ 2.93
CANX-208	ENST00000504579	SIN3A	Q96ST3	1273 aa		33.34	■■■□□ 2.93
CANX-208	ENST00000504579	L3MBTL2	Q969R5	705 aa		33.33	■■■□□ 2.93
CANX-208	ENST00000504579	TRPC5	Q9UL62	973 aa	Predicted RBP	33.33	■■■□□ 2.93
CANX-208	ENST00000504579	RGS12	O14924	1447 aa		33.32	■■■□□ 2.92
CANX-208	ENST00000504579	BCL9L	Q86UU0	1499 aa		33.31	■■■□□ 2.92
CANX-208	ENST00000504579	MARF1	Q9Y4F3	1742 aa	Known RBP	33.31	■■■□□ 2.92
CANX-208	ENST00000504579	ATRN	O75882	1429 aa		33.29	■■■□□ 2.92
CANX-208	ENST00000504579	ARHGEF10	O15013	1369 aa		33.29	■■■□□ 2.92
CANX-208	ENST00000504579	LMOD2	Q6P5Q4	547 aa		33.27	■■■□□ 2.92
CANX-208	ENST00000504579	CABLES1	Q8TDN4	633 aa		33.27	■■■□□ 2.92
CANX-208	ENST00000504579	ATP7B	P35670	1465 aa		33.26	■■■□□ 2.92
CANX-208	ENST00000504579	GPRASP1	Q5JY77	1395 aa		33.26	■■■□□ 2.92
CANX-208	ENST00000504579	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
CANX-208	ENST00000504579	NUDT16	Q96DE0	195 aa	Known RBP	33.26	■■■□□ 2.91
CANX-208	ENST00000504579	CDK19	Q9BWU1	502 aa		33.25	■■■□□ 2.91
CANX-208	ENST00000504579	NEUROD1	Q13562	356 aa		33.24	■■■□□ 2.91
CANX-208	ENST00000504579	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.24	■■■□□ 2.91
CANX-208	ENST00000504579	HAP1	P54257	671 aa	Predicted RBP	33.23	■■■□□ 2.91
CANX-208	ENST00000504579	NGDN	Q8NEJ9	315 aa	Known RBP	33.23	■■■□□ 2.91
CANX-208	ENST00000504579	SLIT2	O94813	1529 aa		33.23	■■■□□ 2.91
CANX-208	ENST00000504579	PLEKHG5	O94827	1062 aa		33.22	■■■□□ 2.91
CANX-208	ENST00000504579	UNC5CL	Q8IV45	518 aa		33.19	■■■□□ 2.9
CANX-208	ENST00000504579	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.17	■■■□□ 2.9
CANX-208	ENST00000504579	ITSN1	Q15811	1721 aa		33.16	■■■□□ 2.9
CANX-208	ENST00000504579	ABCA3	Q99758	1704 aa		33.16	■■■□□ 2.9
CANX-208	ENST00000504579	GJD4	Q96KN9	370 aa	Predicted RBP	33.16	■■■□□ 2.9
CANX-208	ENST00000504579	ALS2	Q96Q42	1657 aa		33.16	■■■□□ 2.9
CANX-208	ENST00000504579	CCDC61	Q9Y6R9	512 aa		33.15	■■■□□ 2.9
CANX-208	ENST00000504579	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.14	■■■□□ 2.9
CANX-208	ENST00000504579	PAK3	O75914	559 aa	Predicted RBP	33.12	■■■□□ 2.89
CANX-208	ENST00000504579	POLR3A	O14802	1390 aa	Predicted RBP	33.11	■■■□□ 2.89
CANX-208	ENST00000504579	TOPAZ1	Q8N9V7	1692 aa		33.11	■■■□□ 2.89
CANX-208	ENST00000504579	TRPM1	Q7Z4N2	1603 aa		33.11	■■■□□ 2.89
CANX-208	ENST00000504579	PLEKHG3	A1L390	1219 aa		33.1	■■■□□ 2.89
CANX-208	ENST00000504579	FAM83G	A6ND36	823 aa		33.1	■■■□□ 2.89
CANX-208	ENST00000504579	ACE	P12821	1306 aa		33.09	■■■□□ 2.89
CANX-208	ENST00000504579	TRIM26	Q12899	539 aa	Predicted RBP	33.09	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms