RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
RACK1-210ENST00000504325 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
RACK1-210ENST00000504325 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
RACK1-210ENST00000504325 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
RACK1-210ENST00000504325 DCCP43146 1447 aa13.26□□□□□ -0.29
RACK1-210ENST00000504325 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
RACK1-210ENST00000504325 MINK1Q8N4C8 1332 aaPredicted RBP13.24□□□□□ -0.29
RACK1-210ENST00000504325 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
RACK1-210ENST00000504325 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
RACK1-210ENST00000504325 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
RACK1-210ENST00000504325 WASLO00401 505 aaPredicted RBP13.22□□□□□ -0.29
RACK1-210ENST00000504325 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
RACK1-210ENST00000504325 FBXO41Q8TF61 875 aa13.22□□□□□ -0.29
RACK1-210ENST00000504325 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
RACK1-210ENST00000504325 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
RACK1-210ENST00000504325 USP47Q96K76 1375 aa13.21□□□□□ -0.29
RACK1-210ENST00000504325 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
RACK1-210ENST00000504325 NALCNQ8IZF0 1738 aa13.2□□□□□ -0.3
RACK1-210ENST00000504325 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
RACK1-210ENST00000504325 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
RACK1-210ENST00000504325 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
RACK1-210ENST00000504325 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
RACK1-210ENST00000504325 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
RACK1-210ENST00000504325 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
RACK1-210ENST00000504325 MST1RQ04912 1400 aa13.19□□□□□ -0.3
RACK1-210ENST00000504325 EVC2Q86UK5 1308 aa13.18□□□□□ -0.3
RACK1-210ENST00000504325 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
RACK1-210ENST00000504325 TESK2Q96S53 571 aa13.18□□□□□ -0.3
RACK1-210ENST00000504325 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
RACK1-210ENST00000504325 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
RACK1-210ENST00000504325 SRPK2P78362 688 aaKnown RBP13.17□□□□□ -0.3
RACK1-210ENST00000504325 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
RACK1-210ENST00000504325 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
RACK1-210ENST00000504325 ANKARQ7Z5J8 1434 aa13.15□□□□□ -0.3
RACK1-210ENST00000504325 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
RACK1-210ENST00000504325 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
RACK1-210ENST00000504325 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
RACK1-210ENST00000504325 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
RACK1-210ENST00000504325 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
RACK1-210ENST00000504325 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.31
RACK1-210ENST00000504325 TMF1P82094 1093 aa13.14□□□□□ -0.31
RACK1-210ENST00000504325 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
RACK1-210ENST00000504325 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
RACK1-210ENST00000504325 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
RACK1-210ENST00000504325 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
RACK1-210ENST00000504325 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
RACK1-210ENST00000504325 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
RACK1-210ENST00000504325 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 PLEKHG3A1L390 1219 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 FOXO3O43524 673 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 ATP7BP35670 1465 aa13.1□□□□□ -0.31
RACK1-210ENST00000504325 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
RACK1-210ENST00000504325 HSPA1LP34931 641 aa13.09□□□□□ -0.31
RACK1-210ENST00000504325 NGDNQ8NEJ9 315 aaKnown RBP13.09□□□□□ -0.31
RACK1-210ENST00000504325 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
RACK1-210ENST00000504325 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
RACK1-210ENST00000504325 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
RACK1-210ENST00000504325 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
RACK1-210ENST00000504325 PSME1Q06323 249 aa13.07□□□□□ -0.32
RACK1-210ENST00000504325 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
RACK1-210ENST00000504325 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
RACK1-210ENST00000504325 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
RACK1-210ENST00000504325 ACEP12821 1306 aa13.06□□□□□ -0.32
RACK1-210ENST00000504325 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
RACK1-210ENST00000504325 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
RACK1-210ENST00000504325 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
RACK1-210ENST00000504325 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
RACK1-210ENST00000504325 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
RACK1-210ENST00000504325 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
RACK1-210ENST00000504325 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
RACK1-210ENST00000504325 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
RACK1-210ENST00000504325 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
RACK1-210ENST00000504325 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
RACK1-210ENST00000504325 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
RACK1-210ENST00000504325 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
RACK1-210ENST00000504325 ITSN1Q15811 1721 aa13.02□□□□□ -0.32
RACK1-210ENST00000504325 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
RACK1-210ENST00000504325 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
RACK1-210ENST00000504325 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.33
RACK1-210ENST00000504325 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
RACK1-210ENST00000504325 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
RACK1-210ENST00000504325 PXDNQ92626 1479 aa13.01□□□□□ -0.33
RACK1-210ENST00000504325 PHLPP1O60346 1717 aa13□□□□□ -0.33
RACK1-210ENST00000504325 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
RACK1-210ENST00000504325 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
RACK1-210ENST00000504325 JCADQ9P266 1359 aa13□□□□□ -0.33
RACK1-210ENST00000504325 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
RACK1-210ENST00000504325 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
RACK1-210ENST00000504325 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
RACK1-210ENST00000504325 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
RACK1-210ENST00000504325 USP6P35125 1406 aa12.98□□□□□ -0.33
RACK1-210ENST00000504325 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
RACK1-210ENST00000504325 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
RACK1-210ENST00000504325 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
RACK1-210ENST00000504325 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
RACK1-210ENST00000504325 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.33
RACK1-210ENST00000504325 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
RACK1-210ENST00000504325 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms