RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 ESCO1Q5FWF5 840 aa31.98■■■□□ 2.71
RNF4-205ENST00000504224 QTRT2Q9H974 415 aaKnown RBP31.98■■■□□ 2.71
RNF4-205ENST00000504224 LAMC1P11047 1609 aa31.96■■■□□ 2.71
RNF4-205ENST00000504224 TMEM132EQ6IEE7 984 aa31.95■■■□□ 2.71
RNF4-205ENST00000504224 WAPLQ7Z5K2 1190 aa31.95■■■□□ 2.71
RNF4-205ENST00000504224 CDK12Q9NYV4 1490 aaPredicted RBP31.95■■■□□ 2.7
RNF4-205ENST00000504224 NUTM2FA1L443 756 aa31.93■■■□□ 2.7
RNF4-205ENST00000504224 LRPPRCP42704 1394 aaKnown RBP31.93■■■□□ 2.7
RNF4-205ENST00000504224 RBM6P78332 1123 aaKnown RBP31.92■■■□□ 2.7
RNF4-205ENST00000504224 CDC42BPGQ6DT37 1551 aa31.92■■■□□ 2.7
RNF4-205ENST00000504224 NPHP3Q7Z494 1330 aa31.91■■■□□ 2.7
RNF4-205ENST00000504224 FOXO3O43524 673 aa31.88■■■□□ 2.69
RNF4-205ENST00000504224 XPCQ01831 940 aaPredicted RBP31.88■■■□□ 2.69
RNF4-205ENST00000504224 TECPR2O15040 1411 aa31.88■■■□□ 2.69
RNF4-205ENST00000504224 IFT172Q9UG01 1749 aa31.88■■■□□ 2.69
RNF4-205ENST00000504224 PIK3C2GO75747 1445 aa31.87■■■□□ 2.69
RNF4-205ENST00000504224 ABCC11Q96J66 1382 aa31.87■■■□□ 2.69
RNF4-205ENST00000504224 RGS12O14924 1447 aa31.86■■■□□ 2.69
RNF4-205ENST00000504224 PLEKHH1Q9ULM0 1364 aa31.86■■■□□ 2.69
RNF4-205ENST00000504224 ACIN1Q9UKV3 1341 aaKnown RBP31.86■■■□□ 2.69
RNF4-205ENST00000504224 USP21Q9UK80 565 aa31.86■■■□□ 2.69
RNF4-205ENST00000504224 YTHDC2Q9H6S0 1430 aaKnown RBP31.83■■■□□ 2.69
RNF4-205ENST00000504224 PXDNQ92626 1479 aa31.8■■■□□ 2.68
RNF4-205ENST00000504224 TRPC5Q9UL62 973 aaPredicted RBP31.8■■■□□ 2.68
RNF4-205ENST00000504224 KNDC1Q76NI1 1749 aa31.79■■■□□ 2.68
RNF4-205ENST00000504224 C14orf93Q9H972 538 aaKnown RBP31.78■■■□□ 2.68
RNF4-205ENST00000504224 COL22A1Q8NFW1 1626 aaPredicted RBP31.78■■■□□ 2.68
RNF4-205ENST00000504224 CFAP70Q5T0N1 1121 aa31.77■■■□□ 2.68
RNF4-205ENST00000504224 FNBP4Q8N3X1 1017 aaPredicted RBP31.77■■■□□ 2.68
RNF4-205ENST00000504224 MYOM2P54296 1465 aa31.77■■■□□ 2.68
RNF4-205ENST00000504224 DHX57Q6P158 1386 aaKnown RBP31.74■■■□□ 2.67
RNF4-205ENST00000504224 RAB3GAP2Q9H2M9 1393 aa31.74■■■□□ 2.67
RNF4-205ENST00000504224 SIRT1Q96EB6 747 aa31.73■■■□□ 2.67
RNF4-205ENST00000504224 SAFB2Q14151 953 aaKnown RBP eCLIP31.72■■■□□ 2.67
RNF4-205ENST00000504224 FMN2Q9NZ56 1722 aa31.71■■■□□ 2.67
RNF4-205ENST00000504224 NRXN1Q9ULB1 1477 aa31.7■■■□□ 2.66
RNF4-205ENST00000504224 ATRNO75882 1429 aa31.69■■■□□ 2.66
RNF4-205ENST00000504224 KRT28Q7Z3Y7 464 aa31.69■■■□□ 2.66
RNF4-205ENST00000504224 PRAM1Q96QH2 718 aa31.68■■■□□ 2.66
RNF4-205ENST00000504224 SPATA31A3Q5VYP0 1347 aa31.67■■■□□ 2.66
RNF4-205ENST00000504224 PHF8Q9UPP1 1060 aa31.66■■■□□ 2.66
RNF4-205ENST00000504224 KIF1AQ12756 1690 aa31.66■■■□□ 2.66
RNF4-205ENST00000504224 ATAD2Q6PL18 1390 aa31.66■■■□□ 2.66
RNF4-205ENST00000504224 POGKQ9P215 609 aa31.65■■■□□ 2.66
RNF4-205ENST00000504224 BCL9LQ86UU0 1499 aa31.64■■■□□ 2.66
RNF4-205ENST00000504224 PLEKHG5O94827 1062 aa31.62■■■□□ 2.65
RNF4-205ENST00000504224 HAP1P54257 671 aaPredicted RBP31.62■■■□□ 2.65
RNF4-205ENST00000504224 PSME1Q06323 249 aa31.61■■■□□ 2.65
RNF4-205ENST00000504224 KDM2AQ9Y2K7 1162 aa31.6■■■□□ 2.65
RNF4-205ENST00000504224 MARF1Q9Y4F3 1742 aaKnown RBP31.6■■■□□ 2.65
RNF4-205ENST00000504224 GJD4Q96KN9 370 aaPredicted RBP31.59■■■□□ 2.65
RNF4-205ENST00000504224 LMOD2Q6P5Q4 547 aa31.58■■■□□ 2.65
RNF4-205ENST00000504224 TRAK1Q9UPV9 953 aa31.57■■■□□ 2.64
RNF4-205ENST00000504224 TNS3Q68CZ2 1445 aa31.57■■■□□ 2.64
RNF4-205ENST00000504224 RGPD8O14715 1765 aaPredicted RBP31.56■■■□□ 2.64
RNF4-205ENST00000504224 UNC5CLQ8IV45 518 aa31.55■■■□□ 2.64
RNF4-205ENST00000504224 DCAF11Q8TEB1 546 aa31.55■■■□□ 2.64
RNF4-205ENST00000504224 DLC1Q96QB1 1528 aa31.54■■■□□ 2.64
RNF4-205ENST00000504224 PMFBP1Q8TBY8 1022 aa31.54■■■□□ 2.64
RNF4-205ENST00000504224 CABLES1Q8TDN4 633 aa31.54■■■□□ 2.64
RNF4-205ENST00000504224 HIRIP3Q9BW71 556 aaPredicted RBP31.53■■■□□ 2.64
RNF4-205ENST00000504224 SBNO1A3KN83 1393 aa31.51■■■□□ 2.63
RNF4-205ENST00000504224 MINK1Q8N4C8 1332 aaPredicted RBP31.5■■■□□ 2.63
RNF4-205ENST00000504224 SLIT2O94813 1529 aa31.5■■■□□ 2.63
RNF4-205ENST00000504224 USP32Q8NFA0 1604 aa31.5■■■□□ 2.63
RNF4-205ENST00000504224 ADGRB1O14514 1584 aa31.5■■■□□ 2.63
RNF4-205ENST00000504224 ANKARQ7Z5J8 1434 aa31.49■■■□□ 2.63
RNF4-205ENST00000504224 RALGAPBQ86X10 1494 aa31.47■■■□□ 2.63
RNF4-205ENST00000504224 ARHGEF10O15013 1369 aa31.47■■■□□ 2.63
RNF4-205ENST00000504224 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.46■■■□□ 2.63
RNF4-205ENST00000504224 ADGRB2O60241 1585 aa31.44■■■□□ 2.62
RNF4-205ENST00000504224 CCDC9Q9Y3X0 531 aaKnown RBP31.44■■■□□ 2.62
RNF4-205ENST00000504224 GLI3P10071 1580 aa31.42■■■□□ 2.62
RNF4-205ENST00000504224 EIF3AQ14152 1382 aaKnown RBP31.42■■■□□ 2.62
RNF4-205ENST00000504224 STAC3Q96MF2 364 aa31.41■■■□□ 2.62
RNF4-205ENST00000504224 GPRASP1Q5JY77 1395 aa31.41■■■□□ 2.62
RNF4-205ENST00000504224 HRCP23327 699 aa31.4■■■□□ 2.62
RNF4-205ENST00000504224 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
RNF4-205ENST00000504224 WASLO00401 505 aaPredicted RBP31.39■■■□□ 2.62
RNF4-205ENST00000504224 VPS72Q15906 364 aa31.39■■■□□ 2.62
RNF4-205ENST00000504224 PRR36Q9H6K5 1346 aa31.39■■■□□ 2.62
RNF4-205ENST00000504224 TULP4Q9NRJ4 1543 aa31.36■■■□□ 2.61
RNF4-205ENST00000504224 FAM83GA6ND36 823 aa31.36■■■□□ 2.61
RNF4-205ENST00000504224 SEPT12Q8IYM1 358 aa31.36■■■□□ 2.61
RNF4-205ENST00000504224 NGDNQ8NEJ9 315 aaKnown RBP31.36■■■□□ 2.61
RNF4-205ENST00000504224 ZRANB1Q9UGI0 708 aa31.35■■■□□ 2.61
RNF4-205ENST00000504224 ABCA3Q99758 1704 aa31.35■■■□□ 2.61
RNF4-205ENST00000504224 PLCH1Q4KWH8 1693 aa31.34■■■□□ 2.61
RNF4-205ENST00000504224 PAK3O75914 559 aaPredicted RBP31.33■■■□□ 2.61
RNF4-205ENST00000504224 A0A0G2JS52 829 aa31.31■■■□□ 2.6
RNF4-205ENST00000504224 MYT1Q01538 1121 aa31.31■■■□□ 2.6
RNF4-205ENST00000504224 NWD2Q9ULI1 1742 aa31.31■■■□□ 2.6
RNF4-205ENST00000504224 EP400Q96L91 3159 aa31.31■■■□□ 2.6
RNF4-205ENST00000504224 TRPM3Q9HCF6 1732 aaPredicted RBP31.3■■■□□ 2.6
RNF4-205ENST00000504224 BTG4Q9NY30 223 aa31.28■■■□□ 2.6
RNF4-205ENST00000504224 BLMP54132 1417 aaPredicted RBP31.27■■■□□ 2.6
RNF4-205ENST00000504224 SF3B2Q13435 895 aaKnown RBP31.26■■■□□ 2.59
RNF4-205ENST00000504224 NUDT16Q96DE0 195 aaKnown RBP31.26■■■□□ 2.59
RNF4-205ENST00000504224 KRT27Q7Z3Y8 459 aa31.25■■■□□ 2.59
RNF4-205ENST00000504224 BRWD3Q6RI45 1802 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms