RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
PRDM2-213ENST00000503842 STRCQ7RTU9 1775 aa18.76■□□□□ 0.59
PRDM2-213ENST00000503842 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
PRDM2-213ENST00000503842 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
PRDM2-213ENST00000503842 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
PRDM2-213ENST00000503842 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
PRDM2-213ENST00000503842 TECPR2O15040 1411 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 ST20-MTHFSA0A0A6YYL1 179 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
PRDM2-213ENST00000503842 HIRIP3Q9BW71 556 aaPredicted RBP18.74■□□□□ 0.59
PRDM2-213ENST00000503842 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
PRDM2-213ENST00000503842 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
PRDM2-213ENST00000503842 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
PRDM2-213ENST00000503842 STK26Q9P289 416 aa18.72■□□□□ 0.59
PRDM2-213ENST00000503842 CPS1P31327 1500 aa18.7■□□□□ 0.58
PRDM2-213ENST00000503842 XRN1Q8IZH2 1706 aaKnown RBP18.7■□□□□ 0.58
PRDM2-213ENST00000503842 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
PRDM2-213ENST00000503842 TESK2Q96S53 571 aa18.7■□□□□ 0.58
PRDM2-213ENST00000503842 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
PRDM2-213ENST00000503842 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
PRDM2-213ENST00000503842 FAM135BQ49AJ0 1406 aa18.68■□□□□ 0.58
PRDM2-213ENST00000503842 CHD2O14647 1828 aaKnown RBP18.68■□□□□ 0.58
PRDM2-213ENST00000503842 PTCH1Q13635 1447 aa18.67■□□□□ 0.58
PRDM2-213ENST00000503842 AMOTL2Q9Y2J4 779 aa18.67■□□□□ 0.58
PRDM2-213ENST00000503842 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
PRDM2-213ENST00000503842 NWD1Q149M9 1564 aa18.66■□□□□ 0.58
PRDM2-213ENST00000503842 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
PRDM2-213ENST00000503842 PRAM1Q96QH2 718 aa18.65■□□□□ 0.58
PRDM2-213ENST00000503842 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
PRDM2-213ENST00000503842 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
PRDM2-213ENST00000503842 KCNA6P17658 529 aa18.64■□□□□ 0.57
PRDM2-213ENST00000503842 POGKQ9P215 609 aa18.63■□□□□ 0.57
PRDM2-213ENST00000503842 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
PRDM2-213ENST00000503842 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
PRDM2-213ENST00000503842 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
PRDM2-213ENST00000503842 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
PRDM2-213ENST00000503842 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
PRDM2-213ENST00000503842 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
PRDM2-213ENST00000503842 TMF1P82094 1093 aa18.6■□□□□ 0.57
PRDM2-213ENST00000503842 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
PRDM2-213ENST00000503842 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
PRDM2-213ENST00000503842 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
PRDM2-213ENST00000503842 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.56
PRDM2-213ENST00000503842 MINK1Q8N4C8 1332 aaPredicted RBP18.56■□□□□ 0.56
PRDM2-213ENST00000503842 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
PRDM2-213ENST00000503842 ADGRB2O60241 1585 aa18.55■□□□□ 0.56
PRDM2-213ENST00000503842 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
PRDM2-213ENST00000503842 CDCA8Q53HL2 280 aa18.54■□□□□ 0.56
PRDM2-213ENST00000503842 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
PRDM2-213ENST00000503842 SSUH2Q9Y2M2 353 aa18.53■□□□□ 0.56
PRDM2-213ENST00000503842 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
PRDM2-213ENST00000503842 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
PRDM2-213ENST00000503842 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
PRDM2-213ENST00000503842 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
PRDM2-213ENST00000503842 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
PRDM2-213ENST00000503842 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
PRDM2-213ENST00000503842 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
PRDM2-213ENST00000503842 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
PRDM2-213ENST00000503842 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
PRDM2-213ENST00000503842 TMEM94Q12767 1356 aa18.47■□□□□ 0.55
PRDM2-213ENST00000503842 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
PRDM2-213ENST00000503842 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
PRDM2-213ENST00000503842 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
PRDM2-213ENST00000503842 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
PRDM2-213ENST00000503842 LRRC7Q96NW7 1537 aa18.46■□□□□ 0.55
PRDM2-213ENST00000503842 RBM33Q96EV2 1170 aaKnown RBP18.46■□□□□ 0.55
PRDM2-213ENST00000503842 MYOM1P52179 1685 aa18.46■□□□□ 0.55
PRDM2-213ENST00000503842 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
PRDM2-213ENST00000503842 XIRP1Q702N8 1843 aaKnown RBP18.43■□□□□ 0.54
PRDM2-213ENST00000503842 ATP7BP35670 1465 aa18.43■□□□□ 0.54
PRDM2-213ENST00000503842 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
PRDM2-213ENST00000503842 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
PRDM2-213ENST00000503842 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
PRDM2-213ENST00000503842 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
PRDM2-213ENST00000503842 DCCP43146 1447 aa18.4■□□□□ 0.54
PRDM2-213ENST00000503842 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
PRDM2-213ENST00000503842 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
PRDM2-213ENST00000503842 NUDT16Q96DE0 195 aaKnown RBP18.4■□□□□ 0.54
PRDM2-213ENST00000503842 C19orf44Q9H6X5 657 aa18.4■□□□□ 0.54
PRDM2-213ENST00000503842 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
PRDM2-213ENST00000503842 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
PRDM2-213ENST00000503842 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
PRDM2-213ENST00000503842 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
PRDM2-213ENST00000503842 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
PRDM2-213ENST00000503842 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
PRDM2-213ENST00000503842 PANK3Q9H999 370 aa18.37■□□□□ 0.53
PRDM2-213ENST00000503842 MSH6P52701 1360 aa18.36■□□□□ 0.53
PRDM2-213ENST00000503842 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
PRDM2-213ENST00000503842 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
PRDM2-213ENST00000503842 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
PRDM2-213ENST00000503842 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
PRDM2-213ENST00000503842 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
PRDM2-213ENST00000503842 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
PRDM2-213ENST00000503842 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
PRDM2-213ENST00000503842 RGPD8O14715 1765 aaPredicted RBP18.33■□□□□ 0.53
PRDM2-213ENST00000503842 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
PRDM2-213ENST00000503842 CADPS2Q86UW7 1296 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms