RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 JPH4Q96JJ6 628 aa8.46□□□□□ -1.06
GYPA-203ENST00000503627 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
GYPA-203ENST00000503627 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
GYPA-203ENST00000503627 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
GYPA-203ENST00000503627 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
GYPA-203ENST00000503627 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
GYPA-203ENST00000503627 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
GYPA-203ENST00000503627 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
GYPA-203ENST00000503627 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
GYPA-203ENST00000503627 TXNDC2Q86VQ3 553 aa8.44□□□□□ -1.06
GYPA-203ENST00000503627 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
GYPA-203ENST00000503627 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
GYPA-203ENST00000503627 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
GYPA-203ENST00000503627 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
GYPA-203ENST00000503627 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
GYPA-203ENST00000503627 KIAA1522Q9P206 1035 aaPredicted RBP8.43□□□□□ -1.06
GYPA-203ENST00000503627 CDK11AQ9UQ88 783 aaPredicted RBP8.43□□□□□ -1.06
GYPA-203ENST00000503627 PRSS12P56730 875 aa8.42□□□□□ -1.06
GYPA-203ENST00000503627 VARS2Q5ST30 1063 aaKnown RBP8.42□□□□□ -1.06
GYPA-203ENST00000503627 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
GYPA-203ENST00000503627 KDM4FA0A1W2PPD8 638 aa8.41□□□□□ -1.06
GYPA-203ENST00000503627 FOSBP53539 338 aa8.41□□□□□ -1.06
GYPA-203ENST00000503627 DNAJC14Q6Y2X3 702 aaPredicted RBP8.41□□□□□ -1.06
GYPA-203ENST00000503627 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
GYPA-203ENST00000503627 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 SOX11P35716 441 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 CDCA7LQ96GN5 454 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 EYA1Q99502 592 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 FAM198AQ9UFP1 575 aa8.4□□□□□ -1.06
GYPA-203ENST00000503627 TBC1D9Q6ZT07 1266 aa8.39□□□□□ -1.07
GYPA-203ENST00000503627 ZSWIM6Q9HCJ5 1215 aa8.39□□□□□ -1.07
GYPA-203ENST00000503627 PHLDB3Q6NSJ2 640 aa8.38□□□□□ -1.07
GYPA-203ENST00000503627 MRRFQ96E11 262 aaKnown RBP8.38□□□□□ -1.07
GYPA-203ENST00000503627 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
GYPA-203ENST00000503627 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
GYPA-203ENST00000503627 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
GYPA-203ENST00000503627 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
GYPA-203ENST00000503627 ZNF687Q8N1G0 1237 aa8.37□□□□□ -1.07
GYPA-203ENST00000503627 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
GYPA-203ENST00000503627 LRRN4Q8WUT4 740 aa8.37□□□□□ -1.07
GYPA-203ENST00000503627 ATP9BO43861 1147 aa8.36□□□□□ -1.07
GYPA-203ENST00000503627 ERCC3P19447 782 aa8.36□□□□□ -1.07
GYPA-203ENST00000503627 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
GYPA-203ENST00000503627 TMEM164Q5U3C3 297 aa8.36□□□□□ -1.07
GYPA-203ENST00000503627 FAM177A1Q8N128 213 aaPredicted RBP8.36□□□□□ -1.07
GYPA-203ENST00000503627 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
GYPA-203ENST00000503627 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
GYPA-203ENST00000503627 HOXA2O43364 376 aa8.35□□□□□ -1.07
GYPA-203ENST00000503627 KDM4AO75164 1064 aa8.35□□□□□ -1.07
GYPA-203ENST00000503627 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
GYPA-203ENST00000503627 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
GYPA-203ENST00000503627 PCDHGC3Q9UN70 934 aa8.35□□□□□ -1.07
GYPA-203ENST00000503627 FDX1P10109 184 aa8.34□□□□□ -1.07
GYPA-203ENST00000503627 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
GYPA-203ENST00000503627 DNAJB2P25686 324 aa8.34□□□□□ -1.07
GYPA-203ENST00000503627 GPR153Q6NV75 609 aa8.34□□□□□ -1.07
GYPA-203ENST00000503627 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
GYPA-203ENST00000503627 C3orf80F5H4A9 247 aa8.33□□□□□ -1.08
GYPA-203ENST00000503627 USP46P62068 366 aa8.33□□□□□ -1.08
GYPA-203ENST00000503627 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
GYPA-203ENST00000503627 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
GYPA-203ENST00000503627 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
GYPA-203ENST00000503627 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
GYPA-203ENST00000503627 GUCA2AQ02747 115 aa8.31□□□□□ -1.08
GYPA-203ENST00000503627 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
GYPA-203ENST00000503627 CFAP99D6REC4 459 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 SSFA2P28290 1259 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
GYPA-203ENST00000503627 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 HLA-CQ95604 372 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 BCL2L13Q9BXK5 485 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 TSKSQ9UJT2 592 aa8.3□□□□□ -1.08
GYPA-203ENST00000503627 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
GYPA-203ENST00000503627 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
GYPA-203ENST00000503627 TCF3P15923 654 aa8.29□□□□□ -1.08
GYPA-203ENST00000503627 MTMR2Q13614 643 aa8.29□□□□□ -1.08
GYPA-203ENST00000503627 NUDT18Q6ZVK8 323 aa8.29□□□□□ -1.08
GYPA-203ENST00000503627 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
GYPA-203ENST00000503627 GCGRP47871 477 aa8.28□□□□□ -1.08
GYPA-203ENST00000503627 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
GYPA-203ENST00000503627 TSC1Q92574 1164 aa8.28□□□□□ -1.08
GYPA-203ENST00000503627 PIK3CDO00329 1044 aa8.27□□□□□ -1.09
GYPA-203ENST00000503627 COL9A1P20849 921 aa8.27□□□□□ -1.09
GYPA-203ENST00000503627 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
GYPA-203ENST00000503627 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
GYPA-203ENST00000503627 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 NR6A1Q15406 480 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
GYPA-203ENST00000503627 NBPF26B4DH59 902 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 SERPINB4P48594 390 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 NPAS4Q8IUM7 802 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 NFATC2IPQ8NCF5 419 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 TATDN2Q93075 761 aa8.25□□□□□ -1.09
GYPA-203ENST00000503627 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms