RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
PCDH1-204ENST00000503492 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
PCDH1-204ENST00000503492 CABP2Q9NPB3 220 aa29.84■■■□□ 2.37
PCDH1-204ENST00000503492 MORC1Q86VD1 984 aa29.82■■■□□ 2.36
PCDH1-204ENST00000503492 ANKRD36BQ8N2N9 1353 aa29.81■■■□□ 2.36
PCDH1-204ENST00000503492 POLR3AO14802 1390 aaPredicted RBP29.8■■■□□ 2.36
PCDH1-204ENST00000503492 ZNF521Q96K83 1311 aa29.8■■■□□ 2.36
PCDH1-204ENST00000503492 PRAM1Q96QH2 718 aa29.79■■■□□ 2.36
PCDH1-204ENST00000503492 CCDC146Q8IYE0 955 aa29.78■■■□□ 2.36
PCDH1-204ENST00000503492 RBM19Q9Y4C8 960 aaKnown RBP29.78■■■□□ 2.36
PCDH1-204ENST00000503492 CGNL1Q0VF96 1302 aa29.78■■■□□ 2.36
PCDH1-204ENST00000503492 RIMS2Q9UQ26 1411 aa29.77■■■□□ 2.36
PCDH1-204ENST00000503492 ZMYM3Q14202 1370 aa29.75■■■□□ 2.35
PCDH1-204ENST00000503492 MINK1Q8N4C8 1332 aaPredicted RBP29.75■■■□□ 2.35
PCDH1-204ENST00000503492 TNNT2P45379 298 aaPredicted RBP29.75■■■□□ 2.35
PCDH1-204ENST00000503492 POGKQ9P215 609 aa29.75■■■□□ 2.35
PCDH1-204ENST00000503492 SRPK2P78362 688 aaKnown RBP29.74■■■□□ 2.35
PCDH1-204ENST00000503492 CCDC136Q96JN2 1154 aa29.73■■■□□ 2.35
PCDH1-204ENST00000503492 ESF1Q9H501 851 aaKnown RBP29.72■■■□□ 2.35
PCDH1-204ENST00000503492 NINLQ9Y2I6 1382 aa29.72■■■□□ 2.35
PCDH1-204ENST00000503492 APAF1O14727 1248 aa29.71■■■□□ 2.35
PCDH1-204ENST00000503492 SHPRHQ149N8 1683 aa29.7■■■□□ 2.35
PCDH1-204ENST00000503492 GOLGA2Q08379 1002 aa29.7■■■□□ 2.35
PCDH1-204ENST00000503492 DUSP27Q5VZP5 1158 aa29.7■■■□□ 2.35
PCDH1-204ENST00000503492 SETD1AO15047 1707 aaKnown RBP29.7■■■□□ 2.35
PCDH1-204ENST00000503492 A0A1W2PP64 1363 aa29.69■■■□□ 2.34
PCDH1-204ENST00000503492 NSD2O96028 1365 aa29.69■■■□□ 2.34
PCDH1-204ENST00000503492 ATAD2Q6PL18 1390 aa29.68■■■□□ 2.34
PCDH1-204ENST00000503492 EXOC6Q8TAG9 804 aa29.68■■■□□ 2.34
PCDH1-204ENST00000503492 DLC1Q96QB1 1528 aa29.65■■■□□ 2.34
PCDH1-204ENST00000503492 ABCC11Q96J66 1382 aa29.65■■■□□ 2.34
PCDH1-204ENST00000503492 MTHFSP49914 203 aa29.64■■■□□ 2.34
PCDH1-204ENST00000503492 SLFN5Q08AF3 891 aa29.64■■■□□ 2.34
PCDH1-204ENST00000503492 NRXN3Q9Y4C0 1643 aa29.63■■■□□ 2.33
PCDH1-204ENST00000503492 CD163L1Q9NR16 1453 aa29.63■■■□□ 2.33
PCDH1-204ENST00000503492 PLIN1O60240 522 aa29.63■■■□□ 2.33
PCDH1-204ENST00000503492 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
PCDH1-204ENST00000503492 TRMT2AQ8IZ69 625 aaKnown RBP29.61■■■□□ 2.33
PCDH1-204ENST00000503492 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.6■■■□□ 2.33
PCDH1-204ENST00000503492 TNRQ92752 1358 aa29.6■■■□□ 2.33
PCDH1-204ENST00000503492 WAPLQ7Z5K2 1190 aa29.6■■■□□ 2.33
PCDH1-204ENST00000503492 NGEFQ8N5V2 710 aa29.6■■■□□ 2.33
PCDH1-204ENST00000503492 SPINK5Q9NQ38 1064 aaPredicted RBP29.59■■■□□ 2.33
PCDH1-204ENST00000503492 TERF2IPQ9NYB0 399 aa29.59■■■□□ 2.33
PCDH1-204ENST00000503492 CFAP53Q96M91 514 aa29.57■■■□□ 2.32
PCDH1-204ENST00000503492 METP08581 1390 aa29.55■■■□□ 2.32
PCDH1-204ENST00000503492 GGNBP2Q9H3C7 697 aa29.55■■■□□ 2.32
PCDH1-204ENST00000503492 DMRT2Q9Y5R5 561 aa29.54■■■□□ 2.32
PCDH1-204ENST00000503492 RUNDC1Q96C34 613 aa29.53■■■□□ 2.32
PCDH1-204ENST00000503492 CABP1Q9NZU7 370 aa29.53■■■□□ 2.32
PCDH1-204ENST00000503492 NLRP1Q9C000 1473 aa29.53■■■□□ 2.32
PCDH1-204ENST00000503492 FYB1O15117 783 aa29.53■■■□□ 2.32
PCDH1-204ENST00000503492 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
PCDH1-204ENST00000503492 E9PSI1 815 aa29.52■■■□□ 2.32
PCDH1-204ENST00000503492 HDGFL2Q7Z4V5 671 aaPredicted RBP29.52■■■□□ 2.32
PCDH1-204ENST00000503492 UBR1Q8IWV7 1749 aa29.51■■■□□ 2.31
PCDH1-204ENST00000503492 MED14O60244 1454 aa29.51■■■□□ 2.31
PCDH1-204ENST00000503492 IQSEC2Q5JU85 1478 aa29.51■■■□□ 2.31
PCDH1-204ENST00000503492 CRBNQ96SW2 442 aa29.5■■■□□ 2.31
PCDH1-204ENST00000503492 WWC1Q8IX03 1113 aa29.5■■■□□ 2.31
PCDH1-204ENST00000503492 NKTRP30414 1462 aaKnown RBP29.5■■■□□ 2.31
PCDH1-204ENST00000503492 HDGFP51858 240 aaKnown RBP29.49■■■□□ 2.31
PCDH1-204ENST00000503492 C20orf194Q5TEA3 1177 aa29.48■■■□□ 2.31
PCDH1-204ENST00000503492 TMEM2Q9UHN6 1383 aa29.48■■■□□ 2.31
PCDH1-204ENST00000503492 TCP11L2Q8N4U5 519 aa29.47■■■□□ 2.31
PCDH1-204ENST00000503492 TXNDC2Q86VQ3 553 aa29.45■■■□□ 2.31
PCDH1-204ENST00000503492 RRP7AQ9Y3A4 280 aaKnown RBP29.45■■■□□ 2.3
PCDH1-204ENST00000503492 KNDC1Q76NI1 1749 aa29.44■■■□□ 2.3
PCDH1-204ENST00000503492 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
PCDH1-204ENST00000503492 ATP7BP35670 1465 aa29.43■■■□□ 2.3
PCDH1-204ENST00000503492 NEUROD2Q15784 382 aa29.43■■■□□ 2.3
PCDH1-204ENST00000503492 PHF23Q9BUL5 403 aaPredicted RBP29.42■■■□□ 2.3
PCDH1-204ENST00000503492 COL3A1P02461 1466 aaPredicted RBP29.42■■■□□ 2.3
PCDH1-204ENST00000503492 TECPR2O15040 1411 aa29.42■■■□□ 2.3
PCDH1-204ENST00000503492 WASLO00401 505 aaPredicted RBP29.42■■■□□ 2.3
PCDH1-204ENST00000503492 U2AF1L5P0DN76 240 aaPredicted RBP29.42■■■□□ 2.3
PCDH1-204ENST00000503492 U2AF1Q01081 240 aaKnown RBP eCLIP29.42■■■□□ 2.3
PCDH1-204ENST00000503492 FAM135BQ49AJ0 1406 aa29.41■■■□□ 2.3
PCDH1-204ENST00000503492 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
PCDH1-204ENST00000503492 CEBPAP49715 358 aaPredicted RBP29.4■■■□□ 2.3
PCDH1-204ENST00000503492 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.39■■■□□ 2.29
PCDH1-204ENST00000503492 CPS1P31327 1500 aa29.39■■■□□ 2.29
PCDH1-204ENST00000503492 ADAMTS13Q76LX8 1427 aa29.37■■■□□ 2.29
PCDH1-204ENST00000503492 FANCIQ9NVI1 1328 aa29.36■■■□□ 2.29
PCDH1-204ENST00000503492 CCDC27Q2M243 656 aa29.36■■■□□ 2.29
PCDH1-204ENST00000503492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.35■■■□□ 2.29
PCDH1-204ENST00000503492 ADGRB2O60241 1585 aa29.35■■■□□ 2.29
PCDH1-204ENST00000503492 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
PCDH1-204ENST00000503492 BCAR3O75815 825 aa29.34■■■□□ 2.29
PCDH1-204ENST00000503492 LTKP29376 864 aa29.34■■■□□ 2.29
PCDH1-204ENST00000503492 WDR63Q8IWG1 891 aa29.34■■■□□ 2.29
PCDH1-204ENST00000503492 CPSF1Q10570 1443 aaKnown RBP29.34■■■□□ 2.29
PCDH1-204ENST00000503492 NCBP3Q53F19 620 aaKnown RBP29.33■■■□□ 2.29
PCDH1-204ENST00000503492 U2SURPO15042 1029 aaKnown RBP29.32■■■□□ 2.28
PCDH1-204ENST00000503492 NUDT16Q96DE0 195 aaKnown RBP29.32■■■□□ 2.28
PCDH1-204ENST00000503492 C3P01024 1663 aa29.32■■■□□ 2.28
PCDH1-204ENST00000503492 PNPLA6Q8IY17 1366 aa29.32■■■□□ 2.28
PCDH1-204ENST00000503492 PLEKHG1Q9ULL1 1385 aa29.32■■■□□ 2.28
PCDH1-204ENST00000503492 PLEKHF1Q96S99 279 aa29.31■■■□□ 2.28
PCDH1-204ENST00000503492 ROBO2Q9HCK4 1378 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 1339.2 ms