RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
TOPBP1-202ENST00000503338 PANK3Q9H999 370 aa11.12□□□□□ -0.63
TOPBP1-202ENST00000503338 AMOTL2Q9Y2J4 779 aa11.12□□□□□ -0.63
TOPBP1-202ENST00000503338 RALBP1Q15311 655 aa11.11□□□□□ -0.63
TOPBP1-202ENST00000503338 PRKRIP1Q9H875 184 aaPredicted RBP11.11□□□□□ -0.63
TOPBP1-202ENST00000503338 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
TOPBP1-202ENST00000503338 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 PER1O15534 1290 aaPredicted RBP11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 SAFB2Q14151 953 aaKnown RBP eCLIP11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 NPC1L1Q9UHC9 1359 aa11.1□□□□□ -0.63
TOPBP1-202ENST00000503338 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
TOPBP1-202ENST00000503338 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
TOPBP1-202ENST00000503338 PTPRUQ92729 1446 aa11.09□□□□□ -0.63
TOPBP1-202ENST00000503338 WASLO00401 505 aaPredicted RBP11.08□□□□□ -0.64
TOPBP1-202ENST00000503338 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
TOPBP1-202ENST00000503338 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 KCNA6P17658 529 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 TMC1Q8TDI8 760 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 TERF2IPQ9NYB0 399 aa11.07□□□□□ -0.64
TOPBP1-202ENST00000503338 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
TOPBP1-202ENST00000503338 MYOM1P52179 1685 aa11.06□□□□□ -0.64
TOPBP1-202ENST00000503338 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
TOPBP1-202ENST00000503338 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
TOPBP1-202ENST00000503338 HDGFL2Q7Z4V5 671 aaPredicted RBP11.05□□□□□ -0.64
TOPBP1-202ENST00000503338 SLC12A5Q9H2X9 1139 aa11.05□□□□□ -0.64
TOPBP1-202ENST00000503338 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
TOPBP1-202ENST00000503338 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
TOPBP1-202ENST00000503338 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
TOPBP1-202ENST00000503338 LMTK3Q96Q04 1460 aa11.04□□□□□ -0.64
TOPBP1-202ENST00000503338 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
TOPBP1-202ENST00000503338 NSD2O96028 1365 aa11.03□□□□□ -0.64
TOPBP1-202ENST00000503338 CHD2O14647 1828 aaKnown RBP11.03□□□□□ -0.64
TOPBP1-202ENST00000503338 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
TOPBP1-202ENST00000503338 ATP7BP35670 1465 aa11.03□□□□□ -0.64
TOPBP1-202ENST00000503338 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
TOPBP1-202ENST00000503338 NKTRP30414 1462 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 NLRP13Q86W25 1043 aa11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 POTEDQ86YR6 584 aa11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 NUDT16Q96DE0 195 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 BRD4O60885 1362 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-202ENST00000503338 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
TOPBP1-202ENST00000503338 CC2D1BQ5T0F9 858 aaKnown RBP11□□□□□ -0.65
TOPBP1-202ENST00000503338 MRS2Q9HD23 443 aa11□□□□□ -0.65
TOPBP1-202ENST00000503338 CABP1Q9NZU7 370 aa11□□□□□ -0.65
TOPBP1-202ENST00000503338 SIPA1L2Q9P2F8 1722 aaPredicted RBP11□□□□□ -0.65
TOPBP1-202ENST00000503338 A0A1W2PP64 1363 aa11□□□□□ -0.65
TOPBP1-202ENST00000503338 PPIP5K1Q6PFW1 1433 aa11□□□□□ -0.65
TOPBP1-202ENST00000503338 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
TOPBP1-202ENST00000503338 HSPA2P54652 639 aa10.99□□□□□ -0.65
TOPBP1-202ENST00000503338 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
TOPBP1-202ENST00000503338 CENPBP07199 599 aaPredicted RBP10.98□□□□□ -0.65
TOPBP1-202ENST00000503338 CPSF1Q10570 1443 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-202ENST00000503338 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
TOPBP1-202ENST00000503338 PROSER2Q86WR7 435 aaPredicted RBP10.97□□□□□ -0.65
TOPBP1-202ENST00000503338 EDC4Q6P2E9 1401 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-202ENST00000503338 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
TOPBP1-202ENST00000503338 C14orf37Q86TY3 774 aa10.96□□□□□ -0.65
TOPBP1-202ENST00000503338 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
TOPBP1-202ENST00000503338 DCCP43146 1447 aa10.95□□□□□ -0.66
TOPBP1-202ENST00000503338 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
TOPBP1-202ENST00000503338 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
TOPBP1-202ENST00000503338 C19orf44Q9H6X5 657 aa10.95□□□□□ -0.66
TOPBP1-202ENST00000503338 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
TOPBP1-202ENST00000503338 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
TOPBP1-202ENST00000503338 TOPAZ1Q8N9V7 1692 aa10.94□□□□□ -0.66
TOPBP1-202ENST00000503338 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
TOPBP1-202ENST00000503338 POLR3AO14802 1390 aaPredicted RBP10.93□□□□□ -0.66
TOPBP1-202ENST00000503338 INSRP06213 1382 aa10.93□□□□□ -0.66
TOPBP1-202ENST00000503338 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 ACEP12821 1306 aa10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 TTC21AQ8NDW8 1320 aa10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 FYB1O15117 783 aa10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 NGDNQ8NEJ9 315 aaKnown RBP10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
TOPBP1-202ENST00000503338 TMEM94Q12767 1356 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 ATF3P18847 181 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 CCDC184Q52MB2 194 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 USP6P35125 1406 aa10.91□□□□□ -0.66
TOPBP1-202ENST00000503338 MSH6P52701 1360 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 AKAP12Q02952 1782 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 COG3Q96JB2 828 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
TOPBP1-202ENST00000503338 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms