RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 TRIM32Q13049 653 aa11.51□□□□□ -0.57
AC109349.1-201ENST00000503299 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
AC109349.1-201ENST00000503299 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
AC109349.1-201ENST00000503299 MSS51Q4VC12 460 aa11.5□□□□□ -0.57
AC109349.1-201ENST00000503299 FCHSD2O94868 740 aa11.49□□□□□ -0.57
AC109349.1-201ENST00000503299 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
AC109349.1-201ENST00000503299 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
AC109349.1-201ENST00000503299 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
AC109349.1-201ENST00000503299 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
AC109349.1-201ENST00000503299 FECHP22830 423 aa11.46□□□□□ -0.57
AC109349.1-201ENST00000503299 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
AC109349.1-201ENST00000503299 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
AC109349.1-201ENST00000503299 H3BM21 787 aa11.42□□□□□ -0.58
AC109349.1-201ENST00000503299 GCGRP47871 477 aa11.42□□□□□ -0.58
AC109349.1-201ENST00000503299 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
AC109349.1-201ENST00000503299 MMP16P51512 607 aa11.41□□□□□ -0.58
AC109349.1-201ENST00000503299 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
AC109349.1-201ENST00000503299 VEGFBP49765 207 aa11.4□□□□□ -0.58
AC109349.1-201ENST00000503299 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
AC109349.1-201ENST00000503299 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
AC109349.1-201ENST00000503299 TRIM46Q7Z4K8 759 aa11.37□□□□□ -0.59
AC109349.1-201ENST00000503299 WNT7BP56706 349 aa11.36□□□□□ -0.59
AC109349.1-201ENST00000503299 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
AC109349.1-201ENST00000503299 SKOR1P84550 965 aa11.35□□□□□ -0.59
AC109349.1-201ENST00000503299 HIC1Q14526 733 aa11.35□□□□□ -0.59
AC109349.1-201ENST00000503299 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
AC109349.1-201ENST00000503299 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
AC109349.1-201ENST00000503299 BMP1P13497 986 aa11.34□□□□□ -0.59
AC109349.1-201ENST00000503299 Q3C1V9 767 aa11.34□□□□□ -0.59
AC109349.1-201ENST00000503299 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
AC109349.1-201ENST00000503299 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
AC109349.1-201ENST00000503299 KCNMA1Q12791 1236 aa11.33□□□□□ -0.6
AC109349.1-201ENST00000503299 CAPN5O15484 640 aaPredicted RBP11.32□□□□□ -0.6
AC109349.1-201ENST00000503299 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
AC109349.1-201ENST00000503299 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
AC109349.1-201ENST00000503299 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
AC109349.1-201ENST00000503299 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
AC109349.1-201ENST00000503299 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
AC109349.1-201ENST00000503299 SIAH2O43255 324 aa11.27□□□□□ -0.61
AC109349.1-201ENST00000503299 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
AC109349.1-201ENST00000503299 GSK3AP49840 483 aa11.26□□□□□ -0.61
AC109349.1-201ENST00000503299 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
AC109349.1-201ENST00000503299 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
AC109349.1-201ENST00000503299 GNPATO15228 680 aa11.23□□□□□ -0.61
AC109349.1-201ENST00000503299 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
AC109349.1-201ENST00000503299 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
AC109349.1-201ENST00000503299 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.61
AC109349.1-201ENST00000503299 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
AC109349.1-201ENST00000503299 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
AC109349.1-201ENST00000503299 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
AC109349.1-201ENST00000503299 SEMA3EO15041 775 aa11.17□□□□□ -0.62
AC109349.1-201ENST00000503299 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
AC109349.1-201ENST00000503299 GDF11O95390 407 aa11.15□□□□□ -0.62
AC109349.1-201ENST00000503299 RASSF7Q02833 373 aa11.15□□□□□ -0.62
AC109349.1-201ENST00000503299 KDM4AO75164 1064 aa11.13□□□□□ -0.63
AC109349.1-201ENST00000503299 MRPL14Q6P1L8 145 aaKnown RBP11.13□□□□□ -0.63
AC109349.1-201ENST00000503299 CD46P15529 392 aa11.12□□□□□ -0.63
AC109349.1-201ENST00000503299 JUNDP17535 347 aa11.12□□□□□ -0.63
AC109349.1-201ENST00000503299 SCARF1Q14162 830 aa11.12□□□□□ -0.63
AC109349.1-201ENST00000503299 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
AC109349.1-201ENST00000503299 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
AC109349.1-201ENST00000503299 GPR37O15354 613 aa11.11□□□□□ -0.63
AC109349.1-201ENST00000503299 USP46P62068 366 aa11.1□□□□□ -0.63
AC109349.1-201ENST00000503299 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
AC109349.1-201ENST00000503299 SH3BP2P78314 561 aa11.09□□□□□ -0.63
AC109349.1-201ENST00000503299 HLA-CQ95604 372 aa11.09□□□□□ -0.63
AC109349.1-201ENST00000503299 PURBQ96QR8 312 aaKnown RBP11.09□□□□□ -0.63
AC109349.1-201ENST00000503299 NUDT12Q9BQG2 462 aa11.08□□□□□ -0.64
AC109349.1-201ENST00000503299 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
AC109349.1-201ENST00000503299 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
AC109349.1-201ENST00000503299 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
AC109349.1-201ENST00000503299 NNTQ13423 1086 aa11.04□□□□□ -0.64
AC109349.1-201ENST00000503299 MPNDQ8N594 471 aa11.04□□□□□ -0.64
AC109349.1-201ENST00000503299 ADAMTS8Q9UP79 889 aa11.04□□□□□ -0.64
AC109349.1-201ENST00000503299 HOXA2O43364 376 aa11.03□□□□□ -0.64
AC109349.1-201ENST00000503299 TIMP2P16035 220 aa11.03□□□□□ -0.64
AC109349.1-201ENST00000503299 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
AC109349.1-201ENST00000503299 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
AC109349.1-201ENST00000503299 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
AC109349.1-201ENST00000503299 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
AC109349.1-201ENST00000503299 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
AC109349.1-201ENST00000503299 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
AC109349.1-201ENST00000503299 MAN1A2O60476 641 aa11□□□□□ -0.65
AC109349.1-201ENST00000503299 ADH1CP00326 375 aa11□□□□□ -0.65
AC109349.1-201ENST00000503299 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
AC109349.1-201ENST00000503299 IGHA1P01876 353 aa10.99□□□□□ -0.65
AC109349.1-201ENST00000503299 VARSP26640 1264 aaKnown RBP10.99□□□□□ -0.65
AC109349.1-201ENST00000503299 GUCA2AQ02747 115 aa10.99□□□□□ -0.65
AC109349.1-201ENST00000503299 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
AC109349.1-201ENST00000503299 KLF16Q9BXK1 252 aaPredicted RBP10.99□□□□□ -0.65
AC109349.1-201ENST00000503299 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
AC109349.1-201ENST00000503299 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
AC109349.1-201ENST00000503299 KRT76Q01546 638 aa10.96□□□□□ -0.65
AC109349.1-201ENST00000503299 BAP1Q92560 729 aa10.96□□□□□ -0.65
AC109349.1-201ENST00000503299 DNMT3AQ9Y6K1 912 aaPredicted RBP10.96□□□□□ -0.65
AC109349.1-201ENST00000503299 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
AC109349.1-201ENST00000503299 UNC93B1Q9H1C4 597 aa10.95□□□□□ -0.66
AC109349.1-201ENST00000503299 MS4A1P11836 297 aa10.94□□□□□ -0.66
AC109349.1-201ENST00000503299 XP32Q5T750 250 aa10.93□□□□□ -0.66
AC109349.1-201ENST00000503299 CNTNAP3BQ96NU0 1288 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms