RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 NKTRP30414 1462 aaKnown RBP28.52■■■□□ 2.16
CDC42SE2-206ENST00000503291 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
CDC42SE2-206ENST00000503291 SLC24A1O60721 1099 aa28.52■■■□□ 2.16
CDC42SE2-206ENST00000503291 TMF1P82094 1093 aa28.5■■■□□ 2.15
CDC42SE2-206ENST00000503291 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.48■■■□□ 2.15
CDC42SE2-206ENST00000503291 DISP3Q9P2K9 1392 aa28.47■■■□□ 2.15
CDC42SE2-206ENST00000503291 EVC2Q86UK5 1308 aa28.45■■■□□ 2.14
CDC42SE2-206ENST00000503291 TMEM94Q12767 1356 aa28.43■■■□□ 2.14
CDC42SE2-206ENST00000503291 WASHC2AQ641Q2 1341 aa28.43■■■□□ 2.14
CDC42SE2-206ENST00000503291 C14orf37Q86TY3 774 aa28.42■■■□□ 2.14
CDC42SE2-206ENST00000503291 KIF7Q2M1P5 1343 aa28.42■■■□□ 2.14
CDC42SE2-206ENST00000503291 TULP4Q9NRJ4 1543 aa28.41■■■□□ 2.14
CDC42SE2-206ENST00000503291 WASLO00401 505 aaPredicted RBP28.41■■■□□ 2.14
CDC42SE2-206ENST00000503291 CDK19Q9BWU1 502 aa28.41■■■□□ 2.14
CDC42SE2-206ENST00000503291 CDCA8Q53HL2 280 aa28.4■■■□□ 2.14
CDC42SE2-206ENST00000503291 POLR3GLQ9BT43 218 aa28.4■■■□□ 2.14
CDC42SE2-206ENST00000503291 LRRC7Q96NW7 1537 aa28.4■■■□□ 2.14
CDC42SE2-206ENST00000503291 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
CDC42SE2-206ENST00000503291 NCOA3Q9Y6Q9 1424 aa28.39■■■□□ 2.13
CDC42SE2-206ENST00000503291 ADGRL3Q9HAR2 1447 aa28.38■■■□□ 2.13
CDC42SE2-206ENST00000503291 ADGRB2O60241 1585 aa28.38■■■□□ 2.13
CDC42SE2-206ENST00000503291 SRPK2P78362 688 aaKnown RBP28.38■■■□□ 2.13
CDC42SE2-206ENST00000503291 CABP2Q9NPB3 220 aa28.38■■■□□ 2.13
CDC42SE2-206ENST00000503291 NALCNQ8IZF0 1738 aa28.37■■■□□ 2.13
CDC42SE2-206ENST00000503291 C19orf44Q9H6X5 657 aa28.36■■■□□ 2.13
CDC42SE2-206ENST00000503291 LTBP4Q8N2S1 1624 aa28.35■■■□□ 2.13
CDC42SE2-206ENST00000503291 PUS7Q96PZ0 661 aaKnown RBP28.35■■■□□ 2.13
CDC42SE2-206ENST00000503291 XIRP1Q702N8 1843 aaKnown RBP28.33■■■□□ 2.13
CDC42SE2-206ENST00000503291 NUTM2FA1L443 756 aa28.3■■■□□ 2.12
CDC42SE2-206ENST00000503291 CDC42BPGQ6DT37 1551 aa28.29■■■□□ 2.12
CDC42SE2-206ENST00000503291 MSH6P52701 1360 aa28.29■■■□□ 2.12
CDC42SE2-206ENST00000503291 NUDT16Q96DE0 195 aaKnown RBP28.28■■■□□ 2.12
CDC42SE2-206ENST00000503291 PRR36Q9H6K5 1346 aa28.26■■■□□ 2.12
CDC42SE2-206ENST00000503291 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.12
CDC42SE2-206ENST00000503291 ATF3P18847 181 aa28.26■■■□□ 2.11
CDC42SE2-206ENST00000503291 DDX10Q13206 875 aaKnown RBP28.25■■■□□ 2.11
CDC42SE2-206ENST00000503291 TMC1Q8TDI8 760 aa28.25■■■□□ 2.11
CDC42SE2-206ENST00000503291 FMN2Q9NZ56 1722 aa28.24■■■□□ 2.11
CDC42SE2-206ENST00000503291 CCDC61Q9Y6R9 512 aa28.24■■■□□ 2.11
CDC42SE2-206ENST00000503291 DCCP43146 1447 aa28.24■■■□□ 2.11
CDC42SE2-206ENST00000503291 CADPS2Q86UW7 1296 aa28.23■■■□□ 2.11
CDC42SE2-206ENST00000503291 SLC12A5Q9H2X9 1139 aa28.23■■■□□ 2.11
CDC42SE2-206ENST00000503291 ATP7BP35670 1465 aa28.23■■■□□ 2.11
CDC42SE2-206ENST00000503291 CABP1Q9NZU7 370 aa28.21■■■□□ 2.11
CDC42SE2-206ENST00000503291 ANKARQ7Z5J8 1434 aa28.2■■■□□ 2.11
CDC42SE2-206ENST00000503291 USP32Q8NFA0 1604 aa28.2■■■□□ 2.1
CDC42SE2-206ENST00000503291 RGPD8O14715 1765 aaPredicted RBP28.18■■■□□ 2.1
CDC42SE2-206ENST00000503291 MYOM1P52179 1685 aa28.18■■■□□ 2.1
CDC42SE2-206ENST00000503291 PPIP5K1Q6PFW1 1433 aa28.17■■■□□ 2.1
CDC42SE2-206ENST00000503291 NINLQ9Y2I6 1382 aa28.16■■■□□ 2.1
CDC42SE2-206ENST00000503291 PANK3Q9H999 370 aa28.15■■■□□ 2.1
CDC42SE2-206ENST00000503291 MST1RQ04912 1400 aa28.15■■■□□ 2.1
CDC42SE2-206ENST00000503291 ESCO1Q5FWF5 840 aa28.14■■■□□ 2.09
CDC42SE2-206ENST00000503291 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.09
CDC42SE2-206ENST00000503291 PLEKHG3A1L390 1219 aa28.13■■■□□ 2.09
CDC42SE2-206ENST00000503291 TOPAZ1Q8N9V7 1692 aa28.12■■■□□ 2.09
CDC42SE2-206ENST00000503291 PMFBP1Q8TBY8 1022 aa28.12■■■□□ 2.09
CDC42SE2-206ENST00000503291 ORAI2Q96SN7 254 aa28.12■■■□□ 2.09
CDC42SE2-206ENST00000503291 SLAIN2Q9P270 581 aa28.11■■■□□ 2.09
CDC42SE2-206ENST00000503291 ITSN1Q15811 1721 aa28.1■■■□□ 2.09
CDC42SE2-206ENST00000503291 TERF2IPQ9NYB0 399 aa28.1■■■□□ 2.09
CDC42SE2-206ENST00000503291 PHF8Q9UPP1 1060 aa28.09■■■□□ 2.09
CDC42SE2-206ENST00000503291 ANKRD36BQ8N2N9 1353 aa28.08■■■□□ 2.09
CDC42SE2-206ENST00000503291 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
CDC42SE2-206ENST00000503291 ACEP12821 1306 aa28.08■■■□□ 2.09
CDC42SE2-206ENST00000503291 CERKQ8TCT0 537 aa28.08■■■□□ 2.08
CDC42SE2-206ENST00000503291 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
CDC42SE2-206ENST00000503291 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
CDC42SE2-206ENST00000503291 A0A1W2PP64 1363 aa28.06■■■□□ 2.08
CDC42SE2-206ENST00000503291 NGDNQ8NEJ9 315 aaKnown RBP28.06■■■□□ 2.08
CDC42SE2-206ENST00000503291 CPSF1Q10570 1443 aaKnown RBP28.05■■■□□ 2.08
CDC42SE2-206ENST00000503291 PER1O15534 1290 aaPredicted RBP28.04■■■□□ 2.08
CDC42SE2-206ENST00000503291 ZNF692Q9BU19 519 aaPredicted RBP28.04■■■□□ 2.08
CDC42SE2-206ENST00000503291 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
CDC42SE2-206ENST00000503291 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
CDC42SE2-206ENST00000503291 KTN1Q86UP2 1357 aaKnown RBP28.01■■■□□ 2.07
CDC42SE2-206ENST00000503291 DIEXFQ68CQ4 756 aaKnown RBP28.01■■■□□ 2.07
CDC42SE2-206ENST00000503291 FOXO3O43524 673 aa28.01■■■□□ 2.07
CDC42SE2-206ENST00000503291 BRINP3Q76B58 766 aa28.01■■■□□ 2.07
CDC42SE2-206ENST00000503291 TOM1O60784 492 aa28■■■□□ 2.07
CDC42SE2-206ENST00000503291 KNSTRNQ9Y448 316 aa27.99■■■□□ 2.07
CDC42SE2-206ENST00000503291 AKAP12Q02952 1782 aa27.98■■■□□ 2.07
CDC42SE2-206ENST00000503291 NSD3Q9BZ95 1437 aa27.98■■■□□ 2.07
CDC42SE2-206ENST00000503291 KIF1AQ12756 1690 aa27.97■■■□□ 2.07
CDC42SE2-206ENST00000503291 PSME1Q06323 249 aa27.96■■■□□ 2.07
CDC42SE2-206ENST00000503291 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
CDC42SE2-206ENST00000503291 USP6P35125 1406 aa27.95■■■□□ 2.07
CDC42SE2-206ENST00000503291 MON2Q7Z3U7 1717 aa27.94■■■□□ 2.06
CDC42SE2-206ENST00000503291 EDC4Q6P2E9 1401 aaKnown RBP27.93■■■□□ 2.06
CDC42SE2-206ENST00000503291 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
CDC42SE2-206ENST00000503291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.92■■■□□ 2.06
CDC42SE2-206ENST00000503291 XPCQ01831 940 aaPredicted RBP27.92■■■□□ 2.06
CDC42SE2-206ENST00000503291 AMER1Q5JTC6 1135 aaPredicted RBP27.91■■■□□ 2.06
CDC42SE2-206ENST00000503291 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
CDC42SE2-206ENST00000503291 SSH2Q76I76 1423 aa27.9■■■□□ 2.06
CDC42SE2-206ENST00000503291 CGNL1Q0VF96 1302 aa27.9■■■□□ 2.06
CDC42SE2-206ENST00000503291 CNGB1Q14028 1251 aaPredicted RBP27.9■■■□□ 2.06
CDC42SE2-206ENST00000503291 KRT28Q7Z3Y7 464 aa27.9■■■□□ 2.06
CDC42SE2-206ENST00000503291 TTC21BQ7Z4L5 1316 aa27.89■■■□□ 2.06
CDC42SE2-206ENST00000503291 PIP4K2BP78356 416 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms