RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
PDGFC-203ENST00000502773 AGLP35573 1532 aa9.58□□□□□ -0.88
PDGFC-203ENST00000502773 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
PDGFC-203ENST00000502773 IRX6P78412 446 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-203ENST00000502773 WDR63Q8IWG1 891 aa9.57□□□□□ -0.88
PDGFC-203ENST00000502773 ANKRD36BQ8N2N9 1353 aa9.57□□□□□ -0.88
PDGFC-203ENST00000502773 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
PDGFC-203ENST00000502773 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
PDGFC-203ENST00000502773 PPRC1Q5VV67 1664 aaKnown RBP9.56□□□□□ -0.88
PDGFC-203ENST00000502773 REREQ9P2R6 1566 aa9.56□□□□□ -0.88
PDGFC-203ENST00000502773 B4GALNT3Q6L9W6 998 aa9.56□□□□□ -0.88
PDGFC-203ENST00000502773 MROH1Q8NDA8 1641 aa9.56□□□□□ -0.88
PDGFC-203ENST00000502773 IDI1Q13907 227 aa9.56□□□□□ -0.88
PDGFC-203ENST00000502773 CENPQQ7L2Z9 268 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-203ENST00000502773 CAMSAP1Q5T5Y3 1602 aa9.55□□□□□ -0.88
PDGFC-203ENST00000502773 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
PDGFC-203ENST00000502773 LMOD3Q0VAK6 560 aa9.55□□□□□ -0.88
PDGFC-203ENST00000502773 DIP2CQ9Y2E4 1556 aa9.55□□□□□ -0.88
PDGFC-203ENST00000502773 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
PDGFC-203ENST00000502773 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
PDGFC-203ENST00000502773 EID1Q9Y6B2 187 aa9.54□□□□□ -0.88
PDGFC-203ENST00000502773 ERVK-7P63135 1459 aa9.54□□□□□ -0.88
PDGFC-203ENST00000502773 NSD3Q9BZ95 1437 aa9.54□□□□□ -0.88
PDGFC-203ENST00000502773 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-203ENST00000502773 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
PDGFC-203ENST00000502773 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
PDGFC-203ENST00000502773 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
PDGFC-203ENST00000502773 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
PDGFC-203ENST00000502773 SLFN5Q08AF3 891 aa9.53□□□□□ -0.88
PDGFC-203ENST00000502773 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
PDGFC-203ENST00000502773 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-203ENST00000502773 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.89
PDGFC-203ENST00000502773 NKTRP30414 1462 aaKnown RBP9.51□□□□□ -0.89
PDGFC-203ENST00000502773 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
PDGFC-203ENST00000502773 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
PDGFC-203ENST00000502773 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
PDGFC-203ENST00000502773 APAF1O14727 1248 aa9.5□□□□□ -0.89
PDGFC-203ENST00000502773 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-203ENST00000502773 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDGFC-203ENST00000502773 STK26Q9P289 416 aa9.5□□□□□ -0.89
PDGFC-203ENST00000502773 FRMPD1Q5SYB0 1578 aa9.5□□□□□ -0.89
PDGFC-203ENST00000502773 IL16Q14005 1332 aa9.5□□□□□ -0.89
PDGFC-203ENST00000502773 PPLO60437 1756 aa9.5□□□□□ -0.89
PDGFC-203ENST00000502773 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
PDGFC-203ENST00000502773 PLPPR3Q6T4P5 718 aa9.49□□□□□ -0.89
PDGFC-203ENST00000502773 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
PDGFC-203ENST00000502773 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
PDGFC-203ENST00000502773 SLC12A5Q9H2X9 1139 aa9.49□□□□□ -0.89
PDGFC-203ENST00000502773 SENP3Q9H4L4 574 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-203ENST00000502773 MED14O60244 1454 aa9.49□□□□□ -0.89
PDGFC-203ENST00000502773 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
PDGFC-203ENST00000502773 USP32Q8NFA0 1604 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 MTHFSP49914 203 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 PRAM1Q96QH2 718 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 DLC1Q96QB1 1528 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 DUSP27Q5VZP5 1158 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-203ENST00000502773 RICTORQ6R327 1708 aa9.48□□□□□ -0.89
PDGFC-203ENST00000502773 PIK3C2BO00750 1634 aa9.47□□□□□ -0.89
PDGFC-203ENST00000502773 FCHSD2O94868 740 aa9.47□□□□□ -0.89
PDGFC-203ENST00000502773 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
PDGFC-203ENST00000502773 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
PDGFC-203ENST00000502773 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.89
PDGFC-203ENST00000502773 TNRQ92752 1358 aa9.46□□□□□ -0.89
PDGFC-203ENST00000502773 FTSJ3Q8IY81 847 aaKnown RBP9.46□□□□□ -0.89
PDGFC-203ENST00000502773 COG3Q96JB2 828 aa9.46□□□□□ -0.89
PDGFC-203ENST00000502773 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
PDGFC-203ENST00000502773 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
PDGFC-203ENST00000502773 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-203ENST00000502773 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
PDGFC-203ENST00000502773 ADGRB1O14514 1584 aa9.46□□□□□ -0.9
PDGFC-203ENST00000502773 PDE4CQ08493 712 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-203ENST00000502773 QRICH2Q9H0J4 1663 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 TCP11L2Q8N4U5 519 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 TRMT2AQ8IZ69 625 aaKnown RBP9.45□□□□□ -0.9
PDGFC-203ENST00000502773 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-203ENST00000502773 ATP7BP35670 1465 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 ZNF521Q96K83 1311 aa9.45□□□□□ -0.9
PDGFC-203ENST00000502773 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
PDGFC-203ENST00000502773 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
PDGFC-203ENST00000502773 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 CRBNQ96SW2 442 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 CCDC61Q9Y6R9 512 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 MLECQ14165 292 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 RIMBP3CA6NJZ7 1639 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 RIMBP3BA6NNM3 1639 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 RIMBP3Q9UFD9 1639 aa9.44□□□□□ -0.9
PDGFC-203ENST00000502773 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-203ENST00000502773 PREX1Q8TCU6 1659 aa9.43□□□□□ -0.9
PDGFC-203ENST00000502773 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms