RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 SOS2Q07890 1332 aaPredicted RBP25.43■■□□□ 1.66
UBE2D3-213ENST00000502690 COL22A1Q8NFW1 1626 aaPredicted RBP25.42■■□□□ 1.66
UBE2D3-213ENST00000502690 STK26Q9P289 416 aa25.42■■□□□ 1.66
UBE2D3-213ENST00000502690 FMN2Q9NZ56 1722 aa25.41■■□□□ 1.66
UBE2D3-213ENST00000502690 TMEM132EQ6IEE7 984 aa25.41■■□□□ 1.66
UBE2D3-213ENST00000502690 WAPLQ7Z5K2 1190 aa25.41■■□□□ 1.66
UBE2D3-213ENST00000502690 C8orf37Q96NL8 207 aa25.41■■□□□ 1.66
UBE2D3-213ENST00000502690 LRPPRCP42704 1394 aaKnown RBP25.41■■□□□ 1.66
UBE2D3-213ENST00000502690 PXDNQ92626 1479 aa25.4■■□□□ 1.66
UBE2D3-213ENST00000502690 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.65
UBE2D3-213ENST00000502690 NRXN1Q9ULB1 1477 aa25.37■■□□□ 1.65
UBE2D3-213ENST00000502690 YTHDC2Q9H6S0 1430 aaKnown RBP25.37■■□□□ 1.65
UBE2D3-213ENST00000502690 CDK12Q9NYV4 1490 aaPredicted RBP25.36■■□□□ 1.65
UBE2D3-213ENST00000502690 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
UBE2D3-213ENST00000502690 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
UBE2D3-213ENST00000502690 ADAMTS2O95450 1211 aa25.36■■□□□ 1.65
UBE2D3-213ENST00000502690 RXRBP28702 533 aa25.36■■□□□ 1.65
UBE2D3-213ENST00000502690 MARF1Q9Y4F3 1742 aaKnown RBP25.35■■□□□ 1.65
UBE2D3-213ENST00000502690 RGS12O14924 1447 aa25.35■■□□□ 1.65
UBE2D3-213ENST00000502690 MYOM2P54296 1465 aa25.34■■□□□ 1.65
UBE2D3-213ENST00000502690 NUTM2FA1L443 756 aa25.34■■□□□ 1.65
UBE2D3-213ENST00000502690 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
UBE2D3-213ENST00000502690 XPCQ01831 940 aaPredicted RBP25.32■■□□□ 1.64
UBE2D3-213ENST00000502690 UPF1Q92900 1129 aaKnown RBP eCLIP25.32■■□□□ 1.64
UBE2D3-213ENST00000502690 KIF1AQ12756 1690 aa25.29■■□□□ 1.64
UBE2D3-213ENST00000502690 FOXO3O43524 673 aa25.28■■□□□ 1.64
UBE2D3-213ENST00000502690 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
UBE2D3-213ENST00000502690 C14orf93Q9H972 538 aaKnown RBP25.28■■□□□ 1.64
UBE2D3-213ENST00000502690 QTRT2Q9H974 415 aaKnown RBP25.28■■□□□ 1.64
UBE2D3-213ENST00000502690 NPHP3Q7Z494 1330 aa25.28■■□□□ 1.64
UBE2D3-213ENST00000502690 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
UBE2D3-213ENST00000502690 USP32Q8NFA0 1604 aa25.24■■□□□ 1.63
UBE2D3-213ENST00000502690 ADGRB1O14514 1584 aa25.24■■□□□ 1.63
UBE2D3-213ENST00000502690 RBM6P78332 1123 aaKnown RBP25.24■■□□□ 1.63
UBE2D3-213ENST00000502690 USP21Q9UK80 565 aa25.21■■□□□ 1.63
UBE2D3-213ENST00000502690 ATRNO75882 1429 aa25.2■■□□□ 1.63
UBE2D3-213ENST00000502690 FNBP4Q8N3X1 1017 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-213ENST00000502690 DLC1Q96QB1 1528 aa25.2■■□□□ 1.62
UBE2D3-213ENST00000502690 ABCA3Q99758 1704 aa25.2■■□□□ 1.62
UBE2D3-213ENST00000502690 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-213ENST00000502690 SAFB2Q14151 953 aaKnown RBP eCLIP25.19■■□□□ 1.62
UBE2D3-213ENST00000502690 BCL9LQ86UU0 1499 aa25.19■■□□□ 1.62
UBE2D3-213ENST00000502690 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-213ENST00000502690 SIRT1Q96EB6 747 aa25.18■■□□□ 1.62
UBE2D3-213ENST00000502690 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
UBE2D3-213ENST00000502690 ADGRB2O60241 1585 aa25.18■■□□□ 1.62
UBE2D3-213ENST00000502690 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
UBE2D3-213ENST00000502690 SPATA31A3Q5VYP0 1347 aa25.15■■□□□ 1.62
UBE2D3-213ENST00000502690 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.62
UBE2D3-213ENST00000502690 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
UBE2D3-213ENST00000502690 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
UBE2D3-213ENST00000502690 KRT28Q7Z3Y7 464 aa25.11■■□□□ 1.61
UBE2D3-213ENST00000502690 PHF8Q9UPP1 1060 aa25.11■■□□□ 1.61
UBE2D3-213ENST00000502690 ARHGEF28Q8N1W1 1705 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-213ENST00000502690 PLCH1Q4KWH8 1693 aa25.1■■□□□ 1.61
UBE2D3-213ENST00000502690 GLI3P10071 1580 aa25.1■■□□□ 1.61
UBE2D3-213ENST00000502690 SLIT2O94813 1529 aa25.1■■□□□ 1.61
UBE2D3-213ENST00000502690 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
UBE2D3-213ENST00000502690 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.61
UBE2D3-213ENST00000502690 EP400Q96L91 3159 aa25.07■■□□□ 1.6
UBE2D3-213ENST00000502690 DCAF11Q8TEB1 546 aa25.07■■□□□ 1.6
UBE2D3-213ENST00000502690 HIRIP3Q9BW71 556 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-213ENST00000502690 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
UBE2D3-213ENST00000502690 ANKARQ7Z5J8 1434 aa25.06■■□□□ 1.6
UBE2D3-213ENST00000502690 CABLES1Q8TDN4 633 aa25.06■■□□□ 1.6
UBE2D3-213ENST00000502690 POGKQ9P215 609 aa25.06■■□□□ 1.6
UBE2D3-213ENST00000502690 ALS2Q96Q42 1657 aa25.05■■□□□ 1.6
UBE2D3-213ENST00000502690 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
UBE2D3-213ENST00000502690 PMFBP1Q8TBY8 1022 aa25.04■■□□□ 1.6
UBE2D3-213ENST00000502690 MINK1Q8N4C8 1332 aaPredicted RBP25.04■■□□□ 1.6
UBE2D3-213ENST00000502690 PRR36Q9H6K5 1346 aa25.04■■□□□ 1.6
UBE2D3-213ENST00000502690 ATAD2Q6PL18 1390 aa25.04■■□□□ 1.6
UBE2D3-213ENST00000502690 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
UBE2D3-213ENST00000502690 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
UBE2D3-213ENST00000502690 SBNO1A3KN83 1393 aa25.03■■□□□ 1.6
UBE2D3-213ENST00000502690 NWD2Q9ULI1 1742 aa25.03■■□□□ 1.6
UBE2D3-213ENST00000502690 CRYBG1Q9Y4K1 1723 aa25.02■■□□□ 1.6
UBE2D3-213ENST00000502690 GJD4Q96KN9 370 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-213ENST00000502690 NRAPQ86VF7 1730 aa25■■□□□ 1.59
UBE2D3-213ENST00000502690 HRCP23327 699 aa24.99■■□□□ 1.59
UBE2D3-213ENST00000502690 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
UBE2D3-213ENST00000502690 PSME1Q06323 249 aa24.98■■□□□ 1.59
UBE2D3-213ENST00000502690 ITSN1Q15811 1721 aa24.98■■□□□ 1.59
UBE2D3-213ENST00000502690 LMOD2Q6P5Q4 547 aa24.97■■□□□ 1.59
UBE2D3-213ENST00000502690 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.59
UBE2D3-213ENST00000502690 ARHGEF10O15013 1369 aa24.95■■□□□ 1.59
UBE2D3-213ENST00000502690 ATP7BP35670 1465 aa24.95■■□□□ 1.58
UBE2D3-213ENST00000502690 WASLO00401 505 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-213ENST00000502690 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-213ENST00000502690 TOPAZ1Q8N9V7 1692 aa24.94■■□□□ 1.58
UBE2D3-213ENST00000502690 EIF3AQ14152 1382 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-213ENST00000502690 COL14A1Q05707 1796 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-213ENST00000502690 FAM83GA6ND36 823 aa24.89■■□□□ 1.58
UBE2D3-213ENST00000502690 STAC3Q96MF2 364 aa24.88■■□□□ 1.57
UBE2D3-213ENST00000502690 PHRF1Q9P1Y6 1649 aaKnown RBP24.87■■□□□ 1.57
UBE2D3-213ENST00000502690 VPS72Q15906 364 aa24.87■■□□□ 1.57
UBE2D3-213ENST00000502690 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
UBE2D3-213ENST00000502690 NBPF1Q3BBV0 1214 aa24.84■■□□□ 1.57
UBE2D3-213ENST00000502690 SEPT12Q8IYM1 358 aa24.84■■□□□ 1.57
UBE2D3-213ENST00000502690 NUDT16Q96DE0 195 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms