RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
LMNA-218ENST00000502357 VGFO15240 615 aaPredicted RBP19.36■□□□□ 0.69
LMNA-218ENST00000502357 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
LMNA-218ENST00000502357 TRPC5Q9UL62 973 aaPredicted RBP19.36■□□□□ 0.69
LMNA-218ENST00000502357 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
LMNA-218ENST00000502357 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
LMNA-218ENST00000502357 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
LMNA-218ENST00000502357 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
LMNA-218ENST00000502357 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
LMNA-218ENST00000502357 TECPR2O15040 1411 aa19.3■□□□□ 0.68
LMNA-218ENST00000502357 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
LMNA-218ENST00000502357 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
LMNA-218ENST00000502357 ADGRF5Q8IZF2 1346 aa19.27■□□□□ 0.68
LMNA-218ENST00000502357 GLI3P10071 1580 aa19.27■□□□□ 0.67
LMNA-218ENST00000502357 SLIT2O94813 1529 aa19.26■□□□□ 0.67
LMNA-218ENST00000502357 FOXO3O43524 673 aa19.26■□□□□ 0.67
LMNA-218ENST00000502357 ESCO1Q5FWF5 840 aa19.26■□□□□ 0.67
LMNA-218ENST00000502357 GJD4Q96KN9 370 aaPredicted RBP19.26■□□□□ 0.67
LMNA-218ENST00000502357 XPCQ01831 940 aaPredicted RBP19.25■□□□□ 0.67
LMNA-218ENST00000502357 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
LMNA-218ENST00000502357 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
LMNA-218ENST00000502357 WAPLQ7Z5K2 1190 aa19.24■□□□□ 0.67
LMNA-218ENST00000502357 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
LMNA-218ENST00000502357 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
LMNA-218ENST00000502357 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
LMNA-218ENST00000502357 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
LMNA-218ENST00000502357 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
LMNA-218ENST00000502357 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
LMNA-218ENST00000502357 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
LMNA-218ENST00000502357 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
LMNA-218ENST00000502357 FOXD1Q16676 465 aa19.21■□□□□ 0.67
LMNA-218ENST00000502357 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
LMNA-218ENST00000502357 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
LMNA-218ENST00000502357 SLC4A1APQ9BWU0 796 aaKnown RBP19.2■□□□□ 0.66
LMNA-218ENST00000502357 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
LMNA-218ENST00000502357 NUTM2FA1L443 756 aa19.18■□□□□ 0.66
LMNA-218ENST00000502357 USP32Q8NFA0 1604 aa19.18■□□□□ 0.66
LMNA-218ENST00000502357 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
LMNA-218ENST00000502357 TMEM132EQ6IEE7 984 aa19.17■□□□□ 0.66
LMNA-218ENST00000502357 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
LMNA-218ENST00000502357 ONECUT3O60422 494 aaPredicted RBP19.16■□□□□ 0.66
LMNA-218ENST00000502357 STK26Q9P289 416 aa19.16■□□□□ 0.66
LMNA-218ENST00000502357 KIF1AQ12756 1690 aa19.16■□□□□ 0.66
LMNA-218ENST00000502357 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
LMNA-218ENST00000502357 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
LMNA-218ENST00000502357 ANKRD30BQ9BXX2 1392 aa19.14■□□□□ 0.65
LMNA-218ENST00000502357 YTHDC2Q9H6S0 1430 aaKnown RBP19.14■□□□□ 0.65
LMNA-218ENST00000502357 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
LMNA-218ENST00000502357 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
LMNA-218ENST00000502357 CCDC144AA2RUR9 1427 aa19.13■□□□□ 0.65
LMNA-218ENST00000502357 ABCA3Q99758 1704 aa19.12■□□□□ 0.65
LMNA-218ENST00000502357 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
LMNA-218ENST00000502357 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
LMNA-218ENST00000502357 VPS72Q15906 364 aa19.11■□□□□ 0.65
LMNA-218ENST00000502357 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
LMNA-218ENST00000502357 NWD2Q9ULI1 1742 aa19.11■□□□□ 0.65
LMNA-218ENST00000502357 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
LMNA-218ENST00000502357 SEPT12Q8IYM1 358 aa19.09■□□□□ 0.65
LMNA-218ENST00000502357 CABLES1Q8TDN4 633 aa19.09■□□□□ 0.65
LMNA-218ENST00000502357 C14orf93Q9H972 538 aaKnown RBP19.08■□□□□ 0.64
LMNA-218ENST00000502357 SBNO1A3KN83 1393 aa19.07■□□□□ 0.64
LMNA-218ENST00000502357 MPHOSPH9Q99550 1183 aa19.07■□□□□ 0.64
LMNA-218ENST00000502357 LRP5O75197 1615 aa19.07■□□□□ 0.64
LMNA-218ENST00000502357 FAM83GA6ND36 823 aa19.06■□□□□ 0.64
LMNA-218ENST00000502357 PHF8Q9UPP1 1060 aa19.06■□□□□ 0.64
LMNA-218ENST00000502357 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
LMNA-218ENST00000502357 TRPM3Q9HCF6 1732 aaPredicted RBP19.04■□□□□ 0.64
LMNA-218ENST00000502357 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
LMNA-218ENST00000502357 KRT27Q7Z3Y8 459 aa19.02■□□□□ 0.64
LMNA-218ENST00000502357 DLC1Q96QB1 1528 aa19.01■□□□□ 0.63
LMNA-218ENST00000502357 PSME1Q06323 249 aa19.01■□□□□ 0.63
LMNA-218ENST00000502357 ALS2Q96Q42 1657 aa19.01■□□□□ 0.63
LMNA-218ENST00000502357 ADGRB2O60241 1585 aa19■□□□□ 0.63
LMNA-218ENST00000502357 CRYBG1Q9Y4K1 1723 aa19■□□□□ 0.63
LMNA-218ENST00000502357 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
LMNA-218ENST00000502357 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
LMNA-218ENST00000502357 ANKARQ7Z5J8 1434 aa18.99■□□□□ 0.63
LMNA-218ENST00000502357 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
LMNA-218ENST00000502357 PRAM1Q96QH2 718 aa18.98■□□□□ 0.63
LMNA-218ENST00000502357 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
LMNA-218ENST00000502357 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
LMNA-218ENST00000502357 HRCP23327 699 aa18.95■□□□□ 0.62
LMNA-218ENST00000502357 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
LMNA-218ENST00000502357 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
LMNA-218ENST00000502357 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
LMNA-218ENST00000502357 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
LMNA-218ENST00000502357 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
LMNA-218ENST00000502357 SF3B2Q13435 895 aaKnown RBP18.93■□□□□ 0.62
LMNA-218ENST00000502357 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
LMNA-218ENST00000502357 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
LMNA-218ENST00000502357 DISP2A7MBM2 1401 aa18.92■□□□□ 0.62
LMNA-218ENST00000502357 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
LMNA-218ENST00000502357 SPATA31A5Q5VU36 1347 aa18.92■□□□□ 0.62
LMNA-218ENST00000502357 SPATA31A7Q8IWB4 1347 aa18.92■□□□□ 0.62
LMNA-218ENST00000502357 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
LMNA-218ENST00000502357 CCDC9Q9Y3X0 531 aaKnown RBP18.91■□□□□ 0.62
LMNA-218ENST00000502357 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
LMNA-218ENST00000502357 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
LMNA-218ENST00000502357 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
LMNA-218ENST00000502357 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms