RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 ORAI2Q96SN7 254 aa20.91■□□□□ 0.94
CLDND1-206ENST00000502299 RGS12O14924 1447 aa20.9■□□□□ 0.94
CLDND1-206ENST00000502299 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
CLDND1-206ENST00000502299 DCAF11Q8TEB1 546 aa20.9■□□□□ 0.94
CLDND1-206ENST00000502299 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
CLDND1-206ENST00000502299 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
CLDND1-206ENST00000502299 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
CLDND1-206ENST00000502299 ADAMTS2O95450 1211 aa20.88■□□□□ 0.93
CLDND1-206ENST00000502299 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
CLDND1-206ENST00000502299 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
CLDND1-206ENST00000502299 MYOM2P54296 1465 aa20.87■□□□□ 0.93
CLDND1-206ENST00000502299 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
CLDND1-206ENST00000502299 C14orf93Q9H972 538 aaKnown RBP20.86■□□□□ 0.93
CLDND1-206ENST00000502299 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
CLDND1-206ENST00000502299 PRAG1Q86YV5 1406 aa20.85■□□□□ 0.93
CLDND1-206ENST00000502299 LAMC1P11047 1609 aa20.85■□□□□ 0.93
CLDND1-206ENST00000502299 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
CLDND1-206ENST00000502299 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
CLDND1-206ENST00000502299 CFAP70Q5T0N1 1121 aa20.82■□□□□ 0.92
CLDND1-206ENST00000502299 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
CLDND1-206ENST00000502299 TMEM132EQ6IEE7 984 aa20.81■□□□□ 0.92
CLDND1-206ENST00000502299 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
CLDND1-206ENST00000502299 USP21Q9UK80 565 aa20.8■□□□□ 0.92
CLDND1-206ENST00000502299 SRCAPQ6ZRS2 3230 aa20.79■□□□□ 0.92
CLDND1-206ENST00000502299 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-206ENST00000502299 STK26Q9P289 416 aa20.79■□□□□ 0.92
CLDND1-206ENST00000502299 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
CLDND1-206ENST00000502299 ABCC11Q96J66 1382 aa20.76■□□□□ 0.91
CLDND1-206ENST00000502299 ESCO1Q5FWF5 840 aa20.76■□□□□ 0.91
CLDND1-206ENST00000502299 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-206ENST00000502299 SIRT1Q96EB6 747 aa20.75■□□□□ 0.91
CLDND1-206ENST00000502299 ATRNO75882 1429 aa20.74■□□□□ 0.91
CLDND1-206ENST00000502299 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
CLDND1-206ENST00000502299 YTHDC2Q9H6S0 1430 aaKnown RBP20.74■□□□□ 0.91
CLDND1-206ENST00000502299 XPCQ01831 940 aaPredicted RBP20.73■□□□□ 0.91
CLDND1-206ENST00000502299 COL22A1Q8NFW1 1626 aaPredicted RBP20.73■□□□□ 0.91
CLDND1-206ENST00000502299 PXDNQ92626 1479 aa20.73■□□□□ 0.91
CLDND1-206ENST00000502299 NPHP3Q7Z494 1330 aa20.73■□□□□ 0.91
CLDND1-206ENST00000502299 ATAD2Q6PL18 1390 aa20.72■□□□□ 0.91
CLDND1-206ENST00000502299 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
CLDND1-206ENST00000502299 TECPR2O15040 1411 aa20.72■□□□□ 0.91
CLDND1-206ENST00000502299 FOXO3O43524 673 aa20.72■□□□□ 0.91
CLDND1-206ENST00000502299 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
CLDND1-206ENST00000502299 BCL9LQ86UU0 1499 aa20.71■□□□□ 0.91
CLDND1-206ENST00000502299 NUTM2FA1L443 756 aa20.7■□□□□ 0.9
CLDND1-206ENST00000502299 PLEKHH1Q9ULM0 1364 aa20.68■□□□□ 0.9
CLDND1-206ENST00000502299 EP400Q96L91 3159 aa20.66■□□□□ 0.9
CLDND1-206ENST00000502299 TRAK1Q9UPV9 953 aa20.66■□□□□ 0.9
CLDND1-206ENST00000502299 KNDC1Q76NI1 1749 aa20.65■□□□□ 0.9
CLDND1-206ENST00000502299 ADGRB1O14514 1584 aa20.65■□□□□ 0.9
CLDND1-206ENST00000502299 POGKQ9P215 609 aa20.65■□□□□ 0.9
CLDND1-206ENST00000502299 GJD4Q96KN9 370 aaPredicted RBP20.64■□□□□ 0.89
CLDND1-206ENST00000502299 PRAM1Q96QH2 718 aa20.64■□□□□ 0.89
CLDND1-206ENST00000502299 TONSLQ96HA7 1378 aa20.63■□□□□ 0.89
CLDND1-206ENST00000502299 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
CLDND1-206ENST00000502299 SPATA31A3Q5VYP0 1347 aa20.61■□□□□ 0.89
CLDND1-206ENST00000502299 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
CLDND1-206ENST00000502299 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
CLDND1-206ENST00000502299 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
CLDND1-206ENST00000502299 SAFB2Q14151 953 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLDND1-206ENST00000502299 SLIT2O94813 1529 aa20.58■□□□□ 0.89
CLDND1-206ENST00000502299 UNC5CLQ8IV45 518 aa20.58■□□□□ 0.89
CLDND1-206ENST00000502299 KRT28Q7Z3Y7 464 aa20.57■□□□□ 0.88
CLDND1-206ENST00000502299 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
CLDND1-206ENST00000502299 ZRANB1Q9UGI0 708 aa20.57■□□□□ 0.88
CLDND1-206ENST00000502299 MARF1Q9Y4F3 1742 aaKnown RBP20.57■□□□□ 0.88
CLDND1-206ENST00000502299 RALGAPBQ86X10 1494 aa20.56■□□□□ 0.88
CLDND1-206ENST00000502299 FMN2Q9NZ56 1722 aa20.56■□□□□ 0.88
CLDND1-206ENST00000502299 GLI3P10071 1580 aa20.55■□□□□ 0.88
CLDND1-206ENST00000502299 NBPF8Q3BBV2 869 aa20.53■□□□□ 0.88
CLDND1-206ENST00000502299 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-206ENST00000502299 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
CLDND1-206ENST00000502299 PHF8Q9UPP1 1060 aa20.53■□□□□ 0.88
CLDND1-206ENST00000502299 TIMELESSQ9UNS1 1208 aa20.52■□□□□ 0.88
CLDND1-206ENST00000502299 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.52■□□□□ 0.88
CLDND1-206ENST00000502299 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.87
CLDND1-206ENST00000502299 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
CLDND1-206ENST00000502299 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
CLDND1-206ENST00000502299 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
CLDND1-206ENST00000502299 USP32Q8NFA0 1604 aa20.5■□□□□ 0.87
CLDND1-206ENST00000502299 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-206ENST00000502299 PLEKHG5O94827 1062 aa20.49■□□□□ 0.87
CLDND1-206ENST00000502299 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
CLDND1-206ENST00000502299 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-206ENST00000502299 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-206ENST00000502299 PSME1Q06323 249 aa20.48■□□□□ 0.87
CLDND1-206ENST00000502299 SEPT12Q8IYM1 358 aa20.48■□□□□ 0.87
CLDND1-206ENST00000502299 VPS72Q15906 364 aa20.47■□□□□ 0.87
CLDND1-206ENST00000502299 ARHGEF28Q8N1W1 1705 aaKnown RBP20.47■□□□□ 0.87
CLDND1-206ENST00000502299 SBNO1A3KN83 1393 aa20.46■□□□□ 0.87
CLDND1-206ENST00000502299 ONECUT3O60422 494 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-206ENST00000502299 HAP1P54257 671 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-206ENST00000502299 DEFB132Q7Z7B7 95 aa20.46■□□□□ 0.87
CLDND1-206ENST00000502299 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-206ENST00000502299 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
CLDND1-206ENST00000502299 ADGRB2O60241 1585 aa20.45■□□□□ 0.86
CLDND1-206ENST00000502299 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-206ENST00000502299 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
CLDND1-206ENST00000502299 LMOD2Q6P5Q4 547 aa20.44■□□□□ 0.86
CLDND1-206ENST00000502299 PMFBP1Q8TBY8 1022 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms