RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 KIF1BO60333 1816 aa12.53□□□□□ -0.4
CLDND1-205ENST00000502288 SLIT2O94813 1529 aa12.53□□□□□ -0.4
CLDND1-205ENST00000502288 NEXMIFQ5QGS0 1516 aa12.53□□□□□ -0.4
CLDND1-205ENST00000502288 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
CLDND1-205ENST00000502288 PXDNQ92626 1479 aa12.53□□□□□ -0.4
CLDND1-205ENST00000502288 APLP2Q06481 763 aa12.52□□□□□ -0.41
CLDND1-205ENST00000502288 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
CLDND1-205ENST00000502288 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
CLDND1-205ENST00000502288 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
CLDND1-205ENST00000502288 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
CLDND1-205ENST00000502288 HRCP23327 699 aa12.5□□□□□ -0.41
CLDND1-205ENST00000502288 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
CLDND1-205ENST00000502288 HFM1A2PYH4 1435 aa12.49□□□□□ -0.41
CLDND1-205ENST00000502288 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
CLDND1-205ENST00000502288 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
CLDND1-205ENST00000502288 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
CLDND1-205ENST00000502288 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
CLDND1-205ENST00000502288 NUP155O75694 1391 aa12.48□□□□□ -0.41
CLDND1-205ENST00000502288 LRPPRCP42704 1394 aaKnown RBP12.48□□□□□ -0.41
CLDND1-205ENST00000502288 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
CLDND1-205ENST00000502288 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
CLDND1-205ENST00000502288 PLCH1Q4KWH8 1693 aa12.47□□□□□ -0.41
CLDND1-205ENST00000502288 BAG6P46379 1132 aa12.46□□□□□ -0.41
CLDND1-205ENST00000502288 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
CLDND1-205ENST00000502288 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
CLDND1-205ENST00000502288 CLTCL1P53675 1640 aa12.46□□□□□ -0.41
CLDND1-205ENST00000502288 PSDA5PKW4 1024 aaPredicted RBP12.45□□□□□ -0.42
CLDND1-205ENST00000502288 FOXO3O43524 673 aa12.45□□□□□ -0.42
CLDND1-205ENST00000502288 VPS72Q15906 364 aa12.45□□□□□ -0.42
CLDND1-205ENST00000502288 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
CLDND1-205ENST00000502288 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
CLDND1-205ENST00000502288 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
CLDND1-205ENST00000502288 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
CLDND1-205ENST00000502288 PPLO60437 1756 aa12.43□□□□□ -0.42
CLDND1-205ENST00000502288 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
CLDND1-205ENST00000502288 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
CLDND1-205ENST00000502288 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
CLDND1-205ENST00000502288 DISP2A7MBM2 1401 aa12.41□□□□□ -0.42
CLDND1-205ENST00000502288 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
CLDND1-205ENST00000502288 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
CLDND1-205ENST00000502288 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
CLDND1-205ENST00000502288 XPCQ01831 940 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-205ENST00000502288 RPGRIP1LQ68CZ1 1315 aa12.39□□□□□ -0.43
CLDND1-205ENST00000502288 CCDC144AA2RUR9 1427 aa12.39□□□□□ -0.43
CLDND1-205ENST00000502288 YY1P25490 414 aa12.39□□□□□ -0.43
CLDND1-205ENST00000502288 KNDC1Q76NI1 1749 aa12.39□□□□□ -0.43
CLDND1-205ENST00000502288 NAIPQ13075 1403 aa12.38□□□□□ -0.43
CLDND1-205ENST00000502288 TECPR2O15040 1411 aa12.37□□□□□ -0.43
CLDND1-205ENST00000502288 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-205ENST00000502288 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
CLDND1-205ENST00000502288 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
CLDND1-205ENST00000502288 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
CLDND1-205ENST00000502288 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
CLDND1-205ENST00000502288 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
CLDND1-205ENST00000502288 RREB1Q92766 1687 aa12.35□□□□□ -0.43
CLDND1-205ENST00000502288 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
CLDND1-205ENST00000502288 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
CLDND1-205ENST00000502288 PSME1Q06323 249 aa12.34□□□□□ -0.43
CLDND1-205ENST00000502288 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
CLDND1-205ENST00000502288 ADGRB2O60241 1585 aa12.34□□□□□ -0.43
CLDND1-205ENST00000502288 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
CLDND1-205ENST00000502288 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
CLDND1-205ENST00000502288 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
CLDND1-205ENST00000502288 CABLES1Q8TDN4 633 aa12.32□□□□□ -0.44
CLDND1-205ENST00000502288 CAMKK2Q96RR4 588 aa12.32□□□□□ -0.44
CLDND1-205ENST00000502288 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
CLDND1-205ENST00000502288 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
CLDND1-205ENST00000502288 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
CLDND1-205ENST00000502288 NUTM2FA1L443 756 aa12.31□□□□□ -0.44
CLDND1-205ENST00000502288 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
CLDND1-205ENST00000502288 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
CLDND1-205ENST00000502288 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
CLDND1-205ENST00000502288 NRXN1Q9ULB1 1477 aa12.3□□□□□ -0.44
CLDND1-205ENST00000502288 A0A0G2JS52 829 aa12.3□□□□□ -0.44
CLDND1-205ENST00000502288 MYT1Q01538 1121 aa12.3□□□□□ -0.44
CLDND1-205ENST00000502288 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
CLDND1-205ENST00000502288 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
CLDND1-205ENST00000502288 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
CLDND1-205ENST00000502288 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
CLDND1-205ENST00000502288 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
CLDND1-205ENST00000502288 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
CLDND1-205ENST00000502288 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
CLDND1-205ENST00000502288 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
CLDND1-205ENST00000502288 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
CLDND1-205ENST00000502288 FAM182BQ5T319 152 aa12.27□□□□□ -0.45
CLDND1-205ENST00000502288 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
CLDND1-205ENST00000502288 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
CLDND1-205ENST00000502288 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.45
CLDND1-205ENST00000502288 RRBP1Q9P2E9 1410 aaKnown RBP12.27□□□□□ -0.45
CLDND1-205ENST00000502288 CHD4Q14839 1912 aa12.26□□□□□ -0.45
CLDND1-205ENST00000502288 NBPF8Q3BBV2 869 aa12.25□□□□□ -0.45
CLDND1-205ENST00000502288 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
CLDND1-205ENST00000502288 SPON1Q9HCB6 807 aa12.25□□□□□ -0.45
CLDND1-205ENST00000502288 STK26Q9P289 416 aa12.25□□□□□ -0.45
CLDND1-205ENST00000502288 TRIM37O94972 964 aa12.24□□□□□ -0.45
CLDND1-205ENST00000502288 ADGRF5Q8IZF2 1346 aa12.24□□□□□ -0.45
CLDND1-205ENST00000502288 YTHDC2Q9H6S0 1430 aaKnown RBP12.24□□□□□ -0.45
CLDND1-205ENST00000502288 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
CLDND1-205ENST00000502288 KCNQ2O43526 872 aa12.23□□□□□ -0.45
CLDND1-205ENST00000502288 APBA3O96018 575 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms