RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
LINC00461-201ENST00000500197 TOPAZ1Q8N9V7 1692 aa13.14□□□□□ -0.31
LINC00461-201ENST00000500197 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
LINC00461-201ENST00000500197 YTHDC2Q9H6S0 1430 aaKnown RBP13.14□□□□□ -0.31
LINC00461-201ENST00000500197 ATP7BP35670 1465 aa13.13□□□□□ -0.31
LINC00461-201ENST00000500197 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
LINC00461-201ENST00000500197 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
LINC00461-201ENST00000500197 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
LINC00461-201ENST00000500197 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
LINC00461-201ENST00000500197 BCANQ96GW7 911 aa13.12□□□□□ -0.31
LINC00461-201ENST00000500197 CC2D1BQ5T0F9 858 aaKnown RBP13.12□□□□□ -0.31
LINC00461-201ENST00000500197 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
LINC00461-201ENST00000500197 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
LINC00461-201ENST00000500197 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
LINC00461-201ENST00000500197 IDI1Q13907 227 aa13.1□□□□□ -0.31
LINC00461-201ENST00000500197 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
LINC00461-201ENST00000500197 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
LINC00461-201ENST00000500197 EVC2Q86UK5 1308 aa13.1□□□□□ -0.31
LINC00461-201ENST00000500197 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
LINC00461-201ENST00000500197 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
LINC00461-201ENST00000500197 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
LINC00461-201ENST00000500197 GGT6Q6P531 493 aa13.09□□□□□ -0.31
LINC00461-201ENST00000500197 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
LINC00461-201ENST00000500197 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
LINC00461-201ENST00000500197 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
LINC00461-201ENST00000500197 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
LINC00461-201ENST00000500197 C3P01024 1663 aa13.08□□□□□ -0.32
LINC00461-201ENST00000500197 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
LINC00461-201ENST00000500197 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
LINC00461-201ENST00000500197 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
LINC00461-201ENST00000500197 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
LINC00461-201ENST00000500197 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
LINC00461-201ENST00000500197 LRRC7Q96NW7 1537 aa13.05□□□□□ -0.32
LINC00461-201ENST00000500197 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
LINC00461-201ENST00000500197 SLIT1O75093 1534 aa13.05□□□□□ -0.32
LINC00461-201ENST00000500197 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
LINC00461-201ENST00000500197 WDR43Q15061 677 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00461-201ENST00000500197 CPSF1Q10570 1443 aaKnown RBP13.03□□□□□ -0.32
LINC00461-201ENST00000500197 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
LINC00461-201ENST00000500197 A0A1W2PP64 1363 aa13.02□□□□□ -0.32
LINC00461-201ENST00000500197 GOLGA2Q08379 1002 aa13.02□□□□□ -0.32
LINC00461-201ENST00000500197 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.32
LINC00461-201ENST00000500197 MS4A1P11836 297 aa13.02□□□□□ -0.33
LINC00461-201ENST00000500197 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
LINC00461-201ENST00000500197 E9PSI1 815 aa13.01□□□□□ -0.33
LINC00461-201ENST00000500197 KDM2BQ8NHM5 1336 aa13.01□□□□□ -0.33
LINC00461-201ENST00000500197 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
LINC00461-201ENST00000500197 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
LINC00461-201ENST00000500197 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
LINC00461-201ENST00000500197 AAMPQ13685 434 aa13□□□□□ -0.33
LINC00461-201ENST00000500197 TRAK1Q9UPV9 953 aa13□□□□□ -0.33
LINC00461-201ENST00000500197 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
LINC00461-201ENST00000500197 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
LINC00461-201ENST00000500197 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC00461-201ENST00000500197 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
LINC00461-201ENST00000500197 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
LINC00461-201ENST00000500197 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
LINC00461-201ENST00000500197 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 ZNF142P52746 1687 aaPredicted RBP12.97□□□□□ -0.33
LINC00461-201ENST00000500197 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
LINC00461-201ENST00000500197 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
LINC00461-201ENST00000500197 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
LINC00461-201ENST00000500197 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.33
LINC00461-201ENST00000500197 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.34
LINC00461-201ENST00000500197 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
LINC00461-201ENST00000500197 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
LINC00461-201ENST00000500197 PLEKHG1Q9ULL1 1385 aa12.95□□□□□ -0.34
LINC00461-201ENST00000500197 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
LINC00461-201ENST00000500197 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
LINC00461-201ENST00000500197 IL16Q14005 1332 aa12.95□□□□□ -0.34
LINC00461-201ENST00000500197 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
LINC00461-201ENST00000500197 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.94□□□□□ -0.34
LINC00461-201ENST00000500197 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
LINC00461-201ENST00000500197 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
LINC00461-201ENST00000500197 TNRQ92752 1358 aa12.93□□□□□ -0.34
LINC00461-201ENST00000500197 TMEM2Q9UHN6 1383 aa12.93□□□□□ -0.34
LINC00461-201ENST00000500197 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
LINC00461-201ENST00000500197 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
LINC00461-201ENST00000500197 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
LINC00461-201ENST00000500197 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
LINC00461-201ENST00000500197 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
LINC00461-201ENST00000500197 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
LINC00461-201ENST00000500197 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
LINC00461-201ENST00000500197 MSH5O43196 834 aa12.9□□□□□ -0.34
LINC00461-201ENST00000500197 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
LINC00461-201ENST00000500197 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
LINC00461-201ENST00000500197 APAF1O14727 1248 aa12.9□□□□□ -0.34
LINC00461-201ENST00000500197 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
LINC00461-201ENST00000500197 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
LINC00461-201ENST00000500197 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
LINC00461-201ENST00000500197 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
LINC00461-201ENST00000500197 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
LINC00461-201ENST00000500197 FYB1O15117 783 aa12.88□□□□□ -0.35
LINC00461-201ENST00000500197 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
LINC00461-201ENST00000500197 METP08581 1390 aa12.88□□□□□ -0.35
LINC00461-201ENST00000500197 MTHFSP49914 203 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms