RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
HDLBP-247ENST00000498595 ABCC11Q96J66 1382 aa21.31■■□□□ 1
HDLBP-247ENST00000498595 WAPLQ7Z5K2 1190 aa21.3■■□□□ 1
HDLBP-247ENST00000498595 CDC42BPGQ6DT37 1551 aa21.3■■□□□ 1
HDLBP-247ENST00000498595 AFF2P51816 1311 aa21.29■■□□□ 1
HDLBP-247ENST00000498595 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
HDLBP-247ENST00000498595 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
HDLBP-247ENST00000498595 RXRBP28702 533 aa21.28■■□□□ 1
HDLBP-247ENST00000498595 C8orf37Q96NL8 207 aa21.28■■□□□ 1
HDLBP-247ENST00000498595 C14orf93Q9H972 538 aaKnown RBP21.28■■□□□ 1
HDLBP-247ENST00000498595 YTHDC2Q9H6S0 1430 aaKnown RBP21.28■■□□□ 1
HDLBP-247ENST00000498595 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
HDLBP-247ENST00000498595 MYOM2P54296 1465 aa21.26■□□□□ 0.99
HDLBP-247ENST00000498595 ADAMTS2O95450 1211 aa21.25■□□□□ 0.99
HDLBP-247ENST00000498595 SIRT1Q96EB6 747 aa21.25■□□□□ 0.99
HDLBP-247ENST00000498595 LAMC1P11047 1609 aa21.25■□□□□ 0.99
HDLBP-247ENST00000498595 NUTM2FA1L443 756 aa21.24■□□□□ 0.99
HDLBP-247ENST00000498595 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
HDLBP-247ENST00000498595 NGLY1Q96IV0 654 aa21.24■□□□□ 0.99
HDLBP-247ENST00000498595 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
HDLBP-247ENST00000498595 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
HDLBP-247ENST00000498595 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
HDLBP-247ENST00000498595 FOXO3O43524 673 aa21.22■□□□□ 0.99
HDLBP-247ENST00000498595 HRCP23327 699 aa21.22■□□□□ 0.99
HDLBP-247ENST00000498595 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
HDLBP-247ENST00000498595 POGKQ9P215 609 aa21.2■□□□□ 0.98
HDLBP-247ENST00000498595 XPCQ01831 940 aaPredicted RBP21.18■□□□□ 0.98
HDLBP-247ENST00000498595 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
HDLBP-247ENST00000498595 CDK12Q9NYV4 1490 aaPredicted RBP21.18■□□□□ 0.98
HDLBP-247ENST00000498595 RBM6P78332 1123 aaKnown RBP21.17■□□□□ 0.98
HDLBP-247ENST00000498595 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
HDLBP-247ENST00000498595 STAC3Q96MF2 364 aa21.17■□□□□ 0.98
HDLBP-247ENST00000498595 PRAM1Q96QH2 718 aa21.17■□□□□ 0.98
HDLBP-247ENST00000498595 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDLBP-247ENST00000498595 PXDNQ92626 1479 aa21.15■□□□□ 0.98
HDLBP-247ENST00000498595 USP21Q9UK80 565 aa21.15■□□□□ 0.98
HDLBP-247ENST00000498595 FMN2Q9NZ56 1722 aa21.13■□□□□ 0.97
HDLBP-247ENST00000498595 KIF1AQ12756 1690 aa21.13■□□□□ 0.97
HDLBP-247ENST00000498595 COL22A1Q8NFW1 1626 aaPredicted RBP21.12■□□□□ 0.97
HDLBP-247ENST00000498595 PSME1Q06323 249 aa21.12■□□□□ 0.97
HDLBP-247ENST00000498595 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
HDLBP-247ENST00000498595 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
HDLBP-247ENST00000498595 DLC1Q96QB1 1528 aa21.11■□□□□ 0.97
HDLBP-247ENST00000498595 KRT28Q7Z3Y7 464 aa21.11■□□□□ 0.97
HDLBP-247ENST00000498595 TRAK1Q9UPV9 953 aa21.11■□□□□ 0.97
HDLBP-247ENST00000498595 FNBP4Q8N3X1 1017 aaPredicted RBP21.1■□□□□ 0.97
HDLBP-247ENST00000498595 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
HDLBP-247ENST00000498595 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
HDLBP-247ENST00000498595 UPF1Q92900 1129 aaKnown RBP eCLIP21.09■□□□□ 0.97
HDLBP-247ENST00000498595 EIF3AQ14152 1382 aaKnown RBP21.09■□□□□ 0.97
HDLBP-247ENST00000498595 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
HDLBP-247ENST00000498595 RGS12O14924 1447 aa21.06■□□□□ 0.96
HDLBP-247ENST00000498595 ANKARQ7Z5J8 1434 aa21.05■□□□□ 0.96
HDLBP-247ENST00000498595 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
HDLBP-247ENST00000498595 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
HDLBP-247ENST00000498595 MINK1Q8N4C8 1332 aaPredicted RBP21.04■□□□□ 0.96
HDLBP-247ENST00000498595 TNS3Q68CZ2 1445 aa21.04■□□□□ 0.96
HDLBP-247ENST00000498595 SBNO1A3KN83 1393 aa21.02■□□□□ 0.96
HDLBP-247ENST00000498595 ARHGEF10O15013 1369 aa21.02■□□□□ 0.96
HDLBP-247ENST00000498595 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
HDLBP-247ENST00000498595 ATRNO75882 1429 aa21.02■□□□□ 0.96
HDLBP-247ENST00000498595 ADGRB2O60241 1585 aa21.02■□□□□ 0.95
HDLBP-247ENST00000498595 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
HDLBP-247ENST00000498595 WASLO00401 505 aaPredicted RBP21■□□□□ 0.95
HDLBP-247ENST00000498595 PLEKHG5O94827 1062 aa21■□□□□ 0.95
HDLBP-247ENST00000498595 ATAD2Q6PL18 1390 aa20.99■□□□□ 0.95
HDLBP-247ENST00000498595 BCL9LQ86UU0 1499 aa20.98■□□□□ 0.95
HDLBP-247ENST00000498595 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
HDLBP-247ENST00000498595 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
HDLBP-247ENST00000498595 TULP4Q9NRJ4 1543 aa20.97■□□□□ 0.95
HDLBP-247ENST00000498595 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
HDLBP-247ENST00000498595 RGPD8O14715 1765 aaPredicted RBP20.96■□□□□ 0.95
HDLBP-247ENST00000498595 GJD4Q96KN9 370 aaPredicted RBP20.96■□□□□ 0.95
HDLBP-247ENST00000498595 CABLES1Q8TDN4 633 aa20.95■□□□□ 0.94
HDLBP-247ENST00000498595 USP32Q8NFA0 1604 aa20.94■□□□□ 0.94
HDLBP-247ENST00000498595 SLIT2O94813 1529 aa20.93■□□□□ 0.94
HDLBP-247ENST00000498595 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
HDLBP-247ENST00000498595 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
HDLBP-247ENST00000498595 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
HDLBP-247ENST00000498595 NUDT16Q96DE0 195 aaKnown RBP20.9■□□□□ 0.94
HDLBP-247ENST00000498595 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
HDLBP-247ENST00000498595 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.89■□□□□ 0.93
HDLBP-247ENST00000498595 CDK19Q9BWU1 502 aa20.88■□□□□ 0.93
HDLBP-247ENST00000498595 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
HDLBP-247ENST00000498595 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
HDLBP-247ENST00000498595 VPS72Q15906 364 aa20.87■□□□□ 0.93
HDLBP-247ENST00000498595 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
HDLBP-247ENST00000498595 CCDC125Q86Z20 511 aa20.85■□□□□ 0.93
HDLBP-247ENST00000498595 ATP7BP35670 1465 aa20.85■□□□□ 0.93
HDLBP-247ENST00000498595 ITSN1Q15811 1721 aa20.84■□□□□ 0.93
HDLBP-247ENST00000498595 FAM83GA6ND36 823 aa20.84■□□□□ 0.93
HDLBP-247ENST00000498595 CCDC61Q9Y6R9 512 aa20.84■□□□□ 0.93
HDLBP-247ENST00000498595 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
HDLBP-247ENST00000498595 CENPJQ9HC77 1338 aaPredicted RBP20.82■□□□□ 0.92
HDLBP-247ENST00000498595 ABCA3Q99758 1704 aa20.82■□□□□ 0.92
HDLBP-247ENST00000498595 NWD2Q9ULI1 1742 aa20.82■□□□□ 0.92
HDLBP-247ENST00000498595 A0A0G2JS52 829 aa20.82■□□□□ 0.92
HDLBP-247ENST00000498595 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
HDLBP-247ENST00000498595 MYT1Q01538 1121 aa20.82■□□□□ 0.92
HDLBP-247ENST00000498595 BTG4Q9NY30 223 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms