RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, human

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKN2A-208	ENST00000498124	ACIN1	Q9UKV3	1341 aa	Known RBP	33.52	■■■□□ 2.96
CDKN2A-208	ENST00000498124	NRXN1	Q9ULB1	1477 aa		33.51	■■■□□ 2.96
CDKN2A-208	ENST00000498124	SOS2	Q07890	1332 aa	Predicted RBP	33.51	■■■□□ 2.95
CDKN2A-208	ENST00000498124	ABCC11	Q96J66	1382 aa		33.48	■■■□□ 2.95
CDKN2A-208	ENST00000498124	MYOM2	P54296	1465 aa		33.48	■■■□□ 2.95
CDKN2A-208	ENST00000498124	PLEKHH1	Q9ULM0	1364 aa		33.47	■■■□□ 2.95
CDKN2A-208	ENST00000498124	TMEM132E	Q6IEE7	984 aa		33.47	■■■□□ 2.95
CDKN2A-208	ENST00000498124	STK26	Q9P289	416 aa		33.47	■■■□□ 2.95
CDKN2A-208	ENST00000498124	WAPL	Q7Z5K2	1190 aa		33.46	■■■□□ 2.95
CDKN2A-208	ENST00000498124	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.45	■■■□□ 2.95
CDKN2A-208	ENST00000498124	AFF2	P51816	1311 aa		33.45	■■■□□ 2.95
CDKN2A-208	ENST00000498124	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.42	■■■□□ 2.94
CDKN2A-208	ENST00000498124	PXDN	Q92626	1479 aa		33.41	■■■□□ 2.94
CDKN2A-208	ENST00000498124	FMN2	Q9NZ56	1722 aa		33.4	■■■□□ 2.94
CDKN2A-208	ENST00000498124	C14orf93	Q9H972	538 aa	Known RBP	33.39	■■■□□ 2.94
CDKN2A-208	ENST00000498124	C8orf37	Q96NL8	207 aa		33.37	■■■□□ 2.93
CDKN2A-208	ENST00000498124	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.37	■■■□□ 2.93
CDKN2A-208	ENST00000498124	ESCO1	Q5FWF5	840 aa		33.36	■■■□□ 2.93
CDKN2A-208	ENST00000498124	RXRB	P28702	533 aa		33.34	■■■□□ 2.93
CDKN2A-208	ENST00000498124	CFAP70	Q5T0N1	1121 aa		33.34	■■■□□ 2.93
CDKN2A-208	ENST00000498124	NPHP3	Q7Z494	1330 aa		33.33	■■■□□ 2.93
CDKN2A-208	ENST00000498124	ADAMTS2	O95450	1211 aa		33.31	■■■□□ 2.92
CDKN2A-208	ENST00000498124	SIRT1	Q96EB6	747 aa		33.31	■■■□□ 2.92
CDKN2A-208	ENST00000498124	NUTM2F	A1L443	756 aa		33.3	■■■□□ 2.92
CDKN2A-208	ENST00000498124	ADGRB1	O14514	1584 aa		33.29	■■■□□ 2.92
CDKN2A-208	ENST00000498124	FOXO3	O43524	673 aa		33.28	■■■□□ 2.92
CDKN2A-208	ENST00000498124	KIF1A	Q12756	1690 aa		33.28	■■■□□ 2.92
CDKN2A-208	ENST00000498124	RGS12	O14924	1447 aa		33.27	■■■□□ 2.92
CDKN2A-208	ENST00000498124	DHX57	Q6P158	1386 aa	Known RBP	33.26	■■■□□ 2.92
CDKN2A-208	ENST00000498124	XPC	Q01831	940 aa	Predicted RBP	33.26	■■■□□ 2.91
CDKN2A-208	ENST00000498124	DLC1	Q96QB1	1528 aa		33.26	■■■□□ 2.91
CDKN2A-208	ENST00000498124	NGLY1	Q96IV0	654 aa		33.23	■■■□□ 2.91
CDKN2A-208	ENST00000498124	QTRT2	Q9H974	415 aa	Known RBP	33.23	■■■□□ 2.91
CDKN2A-208	ENST00000498124	RGPD8	O14715	1765 aa	Predicted RBP	33.23	■■■□□ 2.91
CDKN2A-208	ENST00000498124	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
CDKN2A-208	ENST00000498124	MARF1	Q9Y4F3	1742 aa	Known RBP	33.21	■■■□□ 2.91
CDKN2A-208	ENST00000498124	HRC	P23327	699 aa		33.2	■■■□□ 2.91
CDKN2A-208	ENST00000498124	RBM6	P78332	1123 aa	Known RBP	33.2	■■■□□ 2.91
CDKN2A-208	ENST00000498124	PRAM1	Q96QH2	718 aa		33.2	■■■□□ 2.91
CDKN2A-208	ENST00000498124	ADGRB2	O60241	1585 aa		33.19	■■■□□ 2.9
CDKN2A-208	ENST00000498124	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.18	■■■□□ 2.9
CDKN2A-208	ENST00000498124	USP32	Q8NFA0	1604 aa		33.17	■■■□□ 2.9
CDKN2A-208	ENST00000498124	ATRN	O75882	1429 aa		33.15	■■■□□ 2.9
CDKN2A-208	ENST00000498124	USP21	Q9UK80	565 aa		33.15	■■■□□ 2.9
CDKN2A-208	ENST00000498124	SPATA31A3	Q5VYP0	1347 aa		33.14	■■■□□ 2.9
CDKN2A-208	ENST00000498124	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.14	■■■□□ 2.9
CDKN2A-208	ENST00000498124	BCL9L	Q86UU0	1499 aa		33.12	■■■□□ 2.89
CDKN2A-208	ENST00000498124	DCAF11	Q8TEB1	546 aa		33.1	■■■□□ 2.89
CDKN2A-208	ENST00000498124	PHF8	Q9UPP1	1060 aa		33.1	■■■□□ 2.89
CDKN2A-208	ENST00000498124	KDM2A	Q9Y2K7	1162 aa		33.09	■■■□□ 2.89
CDKN2A-208	ENST00000498124	ANKAR	Q7Z5J8	1434 aa		33.09	■■■□□ 2.89
CDKN2A-208	ENST00000498124	KRT28	Q7Z3Y7	464 aa		33.08	■■■□□ 2.89
CDKN2A-208	ENST00000498124	TRPC5	Q9UL62	973 aa	Predicted RBP	33.08	■■■□□ 2.89
CDKN2A-208	ENST00000498124	TNS3	Q68CZ2	1445 aa		33.08	■■■□□ 2.89
CDKN2A-208	ENST00000498124	POGK	Q9P215	609 aa		33.07	■■■□□ 2.88
CDKN2A-208	ENST00000498124	TRAK1	Q9UPV9	953 aa		33.06	■■■□□ 2.88
CDKN2A-208	ENST00000498124	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.05	■■■□□ 2.88
CDKN2A-208	ENST00000498124	ABCA3	Q99758	1704 aa		33.04	■■■□□ 2.88
CDKN2A-208	ENST00000498124	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.02	■■■□□ 2.88
CDKN2A-208	ENST00000498124	STAC3	Q96MF2	364 aa		33.02	■■■□□ 2.88
CDKN2A-208	ENST00000498124	SLIT2	O94813	1529 aa		33.02	■■■□□ 2.88
CDKN2A-208	ENST00000498124	SBNO1	A3KN83	1393 aa		33.01	■■■□□ 2.88
CDKN2A-208	ENST00000498124	HIRIP3	Q9BW71	556 aa	Predicted RBP	33	■■■□□ 2.87
CDKN2A-208	ENST00000498124	TULP4	Q9NRJ4	1543 aa		33	■■■□□ 2.87
CDKN2A-208	ENST00000498124	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.99	■■■□□ 2.87
CDKN2A-208	ENST00000498124	EP400	Q96L91	3159 aa		32.99	■■■□□ 2.87
CDKN2A-208	ENST00000498124	PRR36	Q9H6K5	1346 aa		32.99	■■■□□ 2.87
CDKN2A-208	ENST00000498124	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.98	■■■□□ 2.87
CDKN2A-208	ENST00000498124	PSME1	Q06323	249 aa		32.96	■■■□□ 2.87
CDKN2A-208	ENST00000498124	PMFBP1	Q8TBY8	1022 aa		32.96	■■■□□ 2.87
CDKN2A-208	ENST00000498124	GLI3	P10071	1580 aa		32.94	■■■□□ 2.86
CDKN2A-208	ENST00000498124	CABLES1	Q8TDN4	633 aa		32.93	■■■□□ 2.86
CDKN2A-208	ENST00000498124	EIF3A	Q14152	1382 aa	Known RBP	32.93	■■■□□ 2.86
CDKN2A-208	ENST00000498124	PLCH1	Q4KWH8	1693 aa		32.92	■■■□□ 2.86
CDKN2A-208	ENST00000498124	ALS2	Q96Q42	1657 aa		32.92	■■■□□ 2.86
CDKN2A-208	ENST00000498124	ARHGEF10	O15013	1369 aa		32.92	■■■□□ 2.86
CDKN2A-208	ENST00000498124	ATAD2	Q6PL18	1390 aa		32.92	■■■□□ 2.86
CDKN2A-208	ENST00000498124	KIAA1210	Q9ULL0	1709 aa		32.91	■■■□□ 2.86
CDKN2A-208	ENST00000498124	WASL	O00401	505 aa	Predicted RBP	32.91	■■■□□ 2.86
CDKN2A-208	ENST00000498124	UNC5CL	Q8IV45	518 aa		32.9	■■■□□ 2.86
CDKN2A-208	ENST00000498124	GJD4	Q96KN9	370 aa	Predicted RBP	32.9	■■■□□ 2.86
CDKN2A-208	ENST00000498124	RALGAPB	Q86X10	1494 aa		32.9	■■■□□ 2.86
CDKN2A-208	ENST00000498124	NWD2	Q9ULI1	1742 aa		32.88	■■■□□ 2.85
CDKN2A-208	ENST00000498124	ATP7B	P35670	1465 aa		32.88	■■■□□ 2.85
CDKN2A-208	ENST00000498124	TRIM26	Q12899	539 aa	Predicted RBP	32.87	■■■□□ 2.85
CDKN2A-208	ENST00000498124	PLEKHG5	O94827	1062 aa		32.84	■■■□□ 2.85
CDKN2A-208	ENST00000498124	LMOD2	Q6P5Q4	547 aa		32.84	■■■□□ 2.85
CDKN2A-208	ENST00000498124	ITSN1	Q15811	1721 aa		32.84	■■■□□ 2.85
CDKN2A-208	ENST00000498124	CRYBG1	Q9Y4K1	1723 aa		32.84	■■■□□ 2.85
CDKN2A-208	ENST00000498124	HAP1	P54257	671 aa	Predicted RBP	32.82	■■■□□ 2.84
CDKN2A-208	ENST00000498124	TOPAZ1	Q8N9V7	1692 aa		32.81	■■■□□ 2.84
CDKN2A-208	ENST00000498124	GPRASP1	Q5JY77	1395 aa		32.81	■■■□□ 2.84
CDKN2A-208	ENST00000498124	NRAP	Q86VF7	1730 aa		32.8	■■■□□ 2.84
CDKN2A-208	ENST00000498124	BRWD3	Q6RI45	1802 aa		32.77	■■■□□ 2.84
CDKN2A-208	ENST00000498124	VPS72	Q15906	364 aa		32.76	■■■□□ 2.83
CDKN2A-208	ENST00000498124	NBPF1	Q3BBV0	1214 aa		32.76	■■■□□ 2.83
CDKN2A-208	ENST00000498124	FAM83G	A6ND36	823 aa		32.75	■■■□□ 2.83
CDKN2A-208	ENST00000498124	NUDT16	Q96DE0	195 aa	Known RBP	32.75	■■■□□ 2.83
CDKN2A-208	ENST00000498124	NGDN	Q8NEJ9	315 aa	Known RBP	32.73	■■■□□ 2.83
CDKN2A-208	ENST00000498124	COL14A1	Q05707	1796 aa	Known RBP	32.73	■■■□□ 2.83

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