RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 WAPLQ7Z5K2 1190 aa14.6□□□□□ -0.07
USP13-205ENST00000497380 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
USP13-205ENST00000497380 XRN1Q8IZH2 1706 aaKnown RBP14.6□□□□□ -0.07
USP13-205ENST00000497380 NWD1Q149M9 1564 aa14.6□□□□□ -0.07
USP13-205ENST00000497380 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
USP13-205ENST00000497380 TESK2Q96S53 571 aa14.59□□□□□ -0.07
USP13-205ENST00000497380 HIRIP3Q9BW71 556 aaPredicted RBP14.59□□□□□ -0.07
USP13-205ENST00000497380 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
USP13-205ENST00000497380 MED1Q15648 1581 aaPredicted RBP14.59□□□□□ -0.07
USP13-205ENST00000497380 SAFB2Q14151 953 aaKnown RBP eCLIP14.58□□□□□ -0.08
USP13-205ENST00000497380 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
USP13-205ENST00000497380 NCOA3Q9Y6Q9 1424 aa14.58□□□□□ -0.08
USP13-205ENST00000497380 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
USP13-205ENST00000497380 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
USP13-205ENST00000497380 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
USP13-205ENST00000497380 ZNF335Q9H4Z2 1342 aaPredicted RBP14.55□□□□□ -0.08
USP13-205ENST00000497380 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
USP13-205ENST00000497380 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
USP13-205ENST00000497380 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
USP13-205ENST00000497380 C19orf44Q9H6X5 657 aa14.53□□□□□ -0.08
USP13-205ENST00000497380 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
USP13-205ENST00000497380 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
USP13-205ENST00000497380 ADGRL3Q9HAR2 1447 aa14.5□□□□□ -0.09
USP13-205ENST00000497380 CCDC7Q96M83 1385 aa14.5□□□□□ -0.09
USP13-205ENST00000497380 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
USP13-205ENST00000497380 POLR3GLQ9BT43 218 aa14.5□□□□□ -0.09
USP13-205ENST00000497380 ADGRB2O60241 1585 aa14.5□□□□□ -0.09
USP13-205ENST00000497380 MSH6P52701 1360 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 ATAD2Q6PL18 1390 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 WASHC2AQ641Q2 1341 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 C11orf95C9JLR9 678 aaPredicted RBP14.49□□□□□ -0.09
USP13-205ENST00000497380 ATF3P18847 181 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 HSPA1LP34931 641 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 STRCP1A6NGW2 1772 aa14.49□□□□□ -0.09
USP13-205ENST00000497380 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
USP13-205ENST00000497380 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
USP13-205ENST00000497380 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
USP13-205ENST00000497380 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
USP13-205ENST00000497380 DCCP43146 1447 aa14.48□□□□□ -0.09
USP13-205ENST00000497380 NINLQ9Y2I6 1382 aa14.47□□□□□ -0.09
USP13-205ENST00000497380 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
USP13-205ENST00000497380 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.09
USP13-205ENST00000497380 TOM1O60784 492 aa14.46□□□□□ -0.09
USP13-205ENST00000497380 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
USP13-205ENST00000497380 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
USP13-205ENST00000497380 CDC42BPGQ6DT37 1551 aa14.46□□□□□ -0.09
USP13-205ENST00000497380 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
USP13-205ENST00000497380 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
USP13-205ENST00000497380 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
USP13-205ENST00000497380 PIP4K2BP78356 416 aa14.43□□□□□ -0.1
USP13-205ENST00000497380 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
USP13-205ENST00000497380 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
USP13-205ENST00000497380 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
USP13-205ENST00000497380 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
USP13-205ENST00000497380 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
USP13-205ENST00000497380 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
USP13-205ENST00000497380 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
USP13-205ENST00000497380 SLC12A5Q9H2X9 1139 aa14.4□□□□□ -0.1
USP13-205ENST00000497380 CABP1Q9NZU7 370 aa14.4□□□□□ -0.1
USP13-205ENST00000497380 PPIP5K1Q6PFW1 1433 aa14.4□□□□□ -0.1
USP13-205ENST00000497380 ATP7BP35670 1465 aa14.39□□□□□ -0.11
USP13-205ENST00000497380 PRR36Q9H6K5 1346 aa14.39□□□□□ -0.11
USP13-205ENST00000497380 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
USP13-205ENST00000497380 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
USP13-205ENST00000497380 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
USP13-205ENST00000497380 ITSN1Q15811 1721 aa14.38□□□□□ -0.11
USP13-205ENST00000497380 ANKRD36BQ8N2N9 1353 aa14.37□□□□□ -0.11
USP13-205ENST00000497380 NGDNQ8NEJ9 315 aaKnown RBP14.37□□□□□ -0.11
USP13-205ENST00000497380 PANK3Q9H999 370 aa14.37□□□□□ -0.11
USP13-205ENST00000497380 PHF8Q9UPP1 1060 aa14.37□□□□□ -0.11
USP13-205ENST00000497380 C1orf167Q5SNV9 1468 aa14.37□□□□□ -0.11
USP13-205ENST00000497380 MST1RQ04912 1400 aa14.36□□□□□ -0.11
USP13-205ENST00000497380 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
USP13-205ENST00000497380 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
USP13-205ENST00000497380 PMFBP1Q8TBY8 1022 aa14.34□□□□□ -0.11
USP13-205ENST00000497380 ACEP12821 1306 aa14.34□□□□□ -0.11
USP13-205ENST00000497380 KTN1Q86UP2 1357 aaKnown RBP14.34□□□□□ -0.11
USP13-205ENST00000497380 USP32Q8NFA0 1604 aa14.33□□□□□ -0.11
USP13-205ENST00000497380 MYOM1P52179 1685 aa14.33□□□□□ -0.11
USP13-205ENST00000497380 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.11
USP13-205ENST00000497380 PSME1Q06323 249 aa14.33□□□□□ -0.12
USP13-205ENST00000497380 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
USP13-205ENST00000497380 ORAI2Q96SN7 254 aa14.33□□□□□ -0.12
USP13-205ENST00000497380 POLR3AO14802 1390 aaPredicted RBP14.33□□□□□ -0.12
USP13-205ENST00000497380 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
USP13-205ENST00000497380 A0A1W2PP64 1363 aa14.32□□□□□ -0.12
USP13-205ENST00000497380 KIF1AQ12756 1690 aa14.31□□□□□ -0.12
USP13-205ENST00000497380 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
USP13-205ENST00000497380 CGNL1Q0VF96 1302 aa14.31□□□□□ -0.12
USP13-205ENST00000497380 NPHP3Q7Z494 1330 aa14.31□□□□□ -0.12
USP13-205ENST00000497380 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
USP13-205ENST00000497380 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
USP13-205ENST00000497380 FOXO3O43524 673 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 BRINP3Q76B58 766 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 TTC21AQ8NDW8 1320 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 NSD3Q9BZ95 1437 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
USP13-205ENST00000497380 ANP32CO43423 234 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms