RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 CLTCL1P53675 1640 aa25.08■■□□□ 1.61
SUPT20H-223ENST00000497318 LRPPRCP42704 1394 aaKnown RBP25.07■■□□□ 1.6
SUPT20H-223ENST00000497318 PRAG1Q86YV5 1406 aa25.07■■□□□ 1.6
SUPT20H-223ENST00000497318 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
SUPT20H-223ENST00000497318 FOXO3O43524 673 aa25.05■■□□□ 1.6
SUPT20H-223ENST00000497318 MYOM2P54296 1465 aa25.04■■□□□ 1.6
SUPT20H-223ENST00000497318 BCL9LQ86UU0 1499 aa25.03■■□□□ 1.6
SUPT20H-223ENST00000497318 KIF1BO60333 1816 aa25.02■■□□□ 1.6
SUPT20H-223ENST00000497318 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
SUPT20H-223ENST00000497318 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
SUPT20H-223ENST00000497318 XPCQ01831 940 aaPredicted RBP25■■□□□ 1.59
SUPT20H-223ENST00000497318 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
SUPT20H-223ENST00000497318 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
SUPT20H-223ENST00000497318 PXDNQ92626 1479 aa24.96■■□□□ 1.59
SUPT20H-223ENST00000497318 SF3B2Q13435 895 aaKnown RBP24.96■■□□□ 1.59
SUPT20H-223ENST00000497318 EP400Q96L91 3159 aa24.96■■□□□ 1.59
SUPT20H-223ENST00000497318 NAIPQ13075 1403 aa24.95■■□□□ 1.59
SUPT20H-223ENST00000497318 STK26Q9P289 416 aa24.95■■□□□ 1.58
SUPT20H-223ENST00000497318 CDC42BPGQ6DT37 1551 aa24.95■■□□□ 1.58
SUPT20H-223ENST00000497318 BLMP54132 1417 aaPredicted RBP24.94■■□□□ 1.58
SUPT20H-223ENST00000497318 NUTM2FA1L443 756 aa24.93■■□□□ 1.58
SUPT20H-223ENST00000497318 HAP1P54257 671 aaPredicted RBP24.91■■□□□ 1.58
SUPT20H-223ENST00000497318 WAPLQ7Z5K2 1190 aa24.91■■□□□ 1.58
SUPT20H-223ENST00000497318 SPATA31A3Q5VYP0 1347 aa24.9■■□□□ 1.58
SUPT20H-223ENST00000497318 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
SUPT20H-223ENST00000497318 PSME1Q06323 249 aa24.88■■□□□ 1.57
SUPT20H-223ENST00000497318 KRT28Q7Z3Y7 464 aa24.88■■□□□ 1.57
SUPT20H-223ENST00000497318 ABCC11Q96J66 1382 aa24.88■■□□□ 1.57
SUPT20H-223ENST00000497318 ADGRF5Q8IZF2 1346 aa24.87■■□□□ 1.57
SUPT20H-223ENST00000497318 CCDC144AA2RUR9 1427 aa24.87■■□□□ 1.57
SUPT20H-223ENST00000497318 SEPT12Q8IYM1 358 aa24.87■■□□□ 1.57
SUPT20H-223ENST00000497318 TECPR2O15040 1411 aa24.86■■□□□ 1.57
SUPT20H-223ENST00000497318 SLIT2O94813 1529 aa24.86■■□□□ 1.57
SUPT20H-223ENST00000497318 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
SUPT20H-223ENST00000497318 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
SUPT20H-223ENST00000497318 VPS72Q15906 364 aa24.85■■□□□ 1.57
SUPT20H-223ENST00000497318 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
SUPT20H-223ENST00000497318 DEFB132Q7Z7B7 95 aa24.84■■□□□ 1.57
SUPT20H-223ENST00000497318 CCDC9Q9Y3X0 531 aaKnown RBP24.84■■□□□ 1.57
SUPT20H-223ENST00000497318 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
SUPT20H-223ENST00000497318 PPLO60437 1756 aa24.82■■□□□ 1.56
SUPT20H-223ENST00000497318 TMEM132EQ6IEE7 984 aa24.82■■□□□ 1.56
SUPT20H-223ENST00000497318 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
SUPT20H-223ENST00000497318 KRT27Q7Z3Y8 459 aa24.81■■□□□ 1.56
SUPT20H-223ENST00000497318 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
SUPT20H-223ENST00000497318 PHF8Q9UPP1 1060 aa24.81■■□□□ 1.56
SUPT20H-223ENST00000497318 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.81■■□□□ 1.56
SUPT20H-223ENST00000497318 GLI3P10071 1580 aa24.79■■□□□ 1.56
SUPT20H-223ENST00000497318 PLEKHH1Q9ULM0 1364 aa24.79■■□□□ 1.56
SUPT20H-223ENST00000497318 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
SUPT20H-223ENST00000497318 CABLES1Q8TDN4 633 aa24.76■■□□□ 1.55
SUPT20H-223ENST00000497318 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
SUPT20H-223ENST00000497318 A0A0G2JS52 829 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 PLEKHG5O94827 1062 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 BAG6P46379 1132 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 MYT1Q01538 1121 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 SBNO1A3KN83 1393 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 ARHGEF10O15013 1369 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 YTHDC2Q9H6S0 1430 aaKnown RBP24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 KIF1AQ12756 1690 aa24.75■■□□□ 1.55
SUPT20H-223ENST00000497318 USP32Q8NFA0 1604 aa24.74■■□□□ 1.55
SUPT20H-223ENST00000497318 SPATA31E1Q6ZUB1 1445 aa24.73■■□□□ 1.55
SUPT20H-223ENST00000497318 FAM83GA6ND36 823 aa24.71■■□□□ 1.55
SUPT20H-223ENST00000497318 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
SUPT20H-223ENST00000497318 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
SUPT20H-223ENST00000497318 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
SUPT20H-223ENST00000497318 FMN2Q9NZ56 1722 aa24.69■■□□□ 1.54
SUPT20H-223ENST00000497318 MPHOSPH9Q99550 1183 aa24.69■■□□□ 1.54
SUPT20H-223ENST00000497318 PSDA5PKW4 1024 aaPredicted RBP24.66■■□□□ 1.54
SUPT20H-223ENST00000497318 HRCP23327 699 aa24.66■■□□□ 1.54
SUPT20H-223ENST00000497318 FAM98CQ17RN3 349 aaKnown RBP24.66■■□□□ 1.54
SUPT20H-223ENST00000497318 POGKQ9P215 609 aa24.66■■□□□ 1.54
SUPT20H-223ENST00000497318 KNDC1Q76NI1 1749 aa24.66■■□□□ 1.54
SUPT20H-223ENST00000497318 PRAM1Q96QH2 718 aa24.65■■□□□ 1.54
SUPT20H-223ENST00000497318 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.54
SUPT20H-223ENST00000497318 BRWD3Q6RI45 1802 aa24.64■■□□□ 1.54
SUPT20H-223ENST00000497318 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
SUPT20H-223ENST00000497318 BTG4Q9NY30 223 aa24.64■■□□□ 1.54
SUPT20H-223ENST00000497318 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
SUPT20H-223ENST00000497318 LRP5O75197 1615 aa24.63■■□□□ 1.53
SUPT20H-223ENST00000497318 NWD2Q9ULI1 1742 aa24.63■■□□□ 1.53
SUPT20H-223ENST00000497318 CFAP70Q5T0N1 1121 aa24.62■■□□□ 1.53
SUPT20H-223ENST00000497318 GPRASP1Q5JY77 1395 aa24.61■■□□□ 1.53
SUPT20H-223ENST00000497318 ANKARQ7Z5J8 1434 aa24.61■■□□□ 1.53
SUPT20H-223ENST00000497318 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
SUPT20H-223ENST00000497318 EN1Q05925 392 aaPredicted RBP24.59■■□□□ 1.53
SUPT20H-223ENST00000497318 PLCH1Q4KWH8 1693 aa24.58■■□□□ 1.53
SUPT20H-223ENST00000497318 IFT172Q9UG01 1749 aa24.56■■□□□ 1.52
SUPT20H-223ENST00000497318 EIF3AQ14152 1382 aaKnown RBP24.55■■□□□ 1.52
SUPT20H-223ENST00000497318 SPATA31A5Q5VU36 1347 aa24.55■■□□□ 1.52
SUPT20H-223ENST00000497318 SPATA31A7Q8IWB4 1347 aa24.55■■□□□ 1.52
SUPT20H-223ENST00000497318 R3HDM1Q15032 1099 aaKnown RBP24.54■■□□□ 1.52
SUPT20H-223ENST00000497318 PRDM11Q9NQV5 511 aa24.52■■□□□ 1.52
SUPT20H-223ENST00000497318 PAK3O75914 559 aaPredicted RBP24.51■■□□□ 1.51
SUPT20H-223ENST00000497318 FAM182BQ5T319 152 aa24.51■■□□□ 1.51
SUPT20H-223ENST00000497318 NGDNQ8NEJ9 315 aaKnown RBP24.51■■□□□ 1.51
SUPT20H-223ENST00000497318 RGPD8O14715 1765 aaPredicted RBP24.51■■□□□ 1.51
SUPT20H-223ENST00000497318 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
SUPT20H-223ENST00000497318 DLC1Q96QB1 1528 aa24.5■■□□□ 1.51
SUPT20H-223ENST00000497318 FAM196AQ6ZSG2 479 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms