RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
SPTBN1-205ENST00000496323 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
SPTBN1-205ENST00000496323 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
SPTBN1-205ENST00000496323 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
SPTBN1-205ENST00000496323 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
SPTBN1-205ENST00000496323 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
SPTBN1-205ENST00000496323 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
SPTBN1-205ENST00000496323 ARHGAP23Q9P227 1491 aa18.47■□□□□ 0.55
SPTBN1-205ENST00000496323 SRPK2P78362 688 aaKnown RBP18.46■□□□□ 0.55
SPTBN1-205ENST00000496323 BCANQ96GW7 911 aa18.46■□□□□ 0.55
SPTBN1-205ENST00000496323 SLIT1O75093 1534 aa18.46■□□□□ 0.55
SPTBN1-205ENST00000496323 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
SPTBN1-205ENST00000496323 TECPR2O15040 1411 aa18.44■□□□□ 0.54
SPTBN1-205ENST00000496323 CDK19Q9BWU1 502 aa18.44■□□□□ 0.54
SPTBN1-205ENST00000496323 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
SPTBN1-205ENST00000496323 EID1Q9Y6B2 187 aa18.43■□□□□ 0.54
SPTBN1-205ENST00000496323 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
SPTBN1-205ENST00000496323 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
SPTBN1-205ENST00000496323 MED14O60244 1454 aa18.43■□□□□ 0.54
SPTBN1-205ENST00000496323 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
SPTBN1-205ENST00000496323 FAM135BQ49AJ0 1406 aa18.41■□□□□ 0.54
SPTBN1-205ENST00000496323 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
SPTBN1-205ENST00000496323 SLC26A8Q96RN1 970 aa18.4■□□□□ 0.54
SPTBN1-205ENST00000496323 RIMS1Q86UR5 1692 aaKnown RBP18.4■□□□□ 0.54
SPTBN1-205ENST00000496323 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
SPTBN1-205ENST00000496323 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.54
SPTBN1-205ENST00000496323 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
SPTBN1-205ENST00000496323 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
SPTBN1-205ENST00000496323 CPS1P31327 1500 aa18.38■□□□□ 0.53
SPTBN1-205ENST00000496323 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
SPTBN1-205ENST00000496323 PTPRUQ92729 1446 aa18.37■□□□□ 0.53
SPTBN1-205ENST00000496323 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
SPTBN1-205ENST00000496323 INSRP06213 1382 aa18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 CEP170BQ9Y4F5 1589 aaPredicted RBP18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
SPTBN1-205ENST00000496323 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
SPTBN1-205ENST00000496323 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
SPTBN1-205ENST00000496323 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
SPTBN1-205ENST00000496323 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
SPTBN1-205ENST00000496323 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
SPTBN1-205ENST00000496323 NSD2O96028 1365 aa18.32■□□□□ 0.52
SPTBN1-205ENST00000496323 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
SPTBN1-205ENST00000496323 AMOTL2Q9Y2J4 779 aa18.31■□□□□ 0.52
SPTBN1-205ENST00000496323 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
SPTBN1-205ENST00000496323 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
SPTBN1-205ENST00000496323 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
SPTBN1-205ENST00000496323 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
SPTBN1-205ENST00000496323 FYB1O15117 783 aa18.29■□□□□ 0.52
SPTBN1-205ENST00000496323 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
SPTBN1-205ENST00000496323 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
SPTBN1-205ENST00000496323 ATP7BP35670 1465 aa18.28■□□□□ 0.52
SPTBN1-205ENST00000496323 FKBP8Q14318 412 aa18.27■□□□□ 0.52
SPTBN1-205ENST00000496323 GGNBP2Q9H3C7 697 aa18.27■□□□□ 0.52
SPTBN1-205ENST00000496323 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
SPTBN1-205ENST00000496323 DIP2AQ14689 1571 aa18.27■□□□□ 0.52
SPTBN1-205ENST00000496323 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.51
SPTBN1-205ENST00000496323 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 CPSF1Q10570 1443 aaKnown RBP18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
SPTBN1-205ENST00000496323 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
SPTBN1-205ENST00000496323 MTHFSP49914 203 aa18.25■□□□□ 0.51
SPTBN1-205ENST00000496323 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
SPTBN1-205ENST00000496323 ADGRB2O60241 1585 aa18.24■□□□□ 0.51
SPTBN1-205ENST00000496323 NEFLP07196 543 aa18.22■□□□□ 0.51
SPTBN1-205ENST00000496323 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
SPTBN1-205ENST00000496323 KCNA6P17658 529 aa18.22■□□□□ 0.51
SPTBN1-205ENST00000496323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
SPTBN1-205ENST00000496323 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
SPTBN1-205ENST00000496323 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
SPTBN1-205ENST00000496323 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
SPTBN1-205ENST00000496323 EDC4Q6P2E9 1401 aaKnown RBP18.19■□□□□ 0.5
SPTBN1-205ENST00000496323 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
SPTBN1-205ENST00000496323 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
SPTBN1-205ENST00000496323 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
SPTBN1-205ENST00000496323 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
SPTBN1-205ENST00000496323 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
SPTBN1-205ENST00000496323 SETD1BQ9UPS6 1966 aaKnown RBP18.16■□□□□ 0.5
SPTBN1-205ENST00000496323 NME9Q86XW9 330 aa18.16■□□□□ 0.5
SPTBN1-205ENST00000496323 SHPRHQ149N8 1683 aa18.15■□□□□ 0.5
SPTBN1-205ENST00000496323 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
SPTBN1-205ENST00000496323 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
SPTBN1-205ENST00000496323 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
SPTBN1-205ENST00000496323 APAF1O14727 1248 aa18.14■□□□□ 0.49
SPTBN1-205ENST00000496323 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
SPTBN1-205ENST00000496323 ACEP12821 1306 aa18.14■□□□□ 0.49
SPTBN1-205ENST00000496323 NPHP4O75161 1426 aaPredicted RBP18.13■□□□□ 0.49
SPTBN1-205ENST00000496323 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
SPTBN1-205ENST00000496323 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
SPTBN1-205ENST00000496323 FBLN1P23142 703 aa18.13■□□□□ 0.49
SPTBN1-205ENST00000496323 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
SPTBN1-205ENST00000496323 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
SPTBN1-205ENST00000496323 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
SPTBN1-205ENST00000496323 PNPLA6Q8IY17 1366 aa18.11■□□□□ 0.49
SPTBN1-205ENST00000496323 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms