RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
SORT1-208ENST00000495777 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
SORT1-208ENST00000495777 PPLO60437 1756 aa13.22□□□□□ -0.29
SORT1-208ENST00000495777 NPHP3Q7Z494 1330 aa13.21□□□□□ -0.29
SORT1-208ENST00000495777 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
SORT1-208ENST00000495777 PXDNQ92626 1479 aa13.21□□□□□ -0.3
SORT1-208ENST00000495777 USP21Q9UK80 565 aa13.2□□□□□ -0.3
SORT1-208ENST00000495777 CCDC144AA2RUR9 1427 aa13.2□□□□□ -0.3
SORT1-208ENST00000495777 ATRNO75882 1429 aa13.2□□□□□ -0.3
SORT1-208ENST00000495777 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
SORT1-208ENST00000495777 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
SORT1-208ENST00000495777 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
SORT1-208ENST00000495777 FOXD1Q16676 465 aa13.19□□□□□ -0.3
SORT1-208ENST00000495777 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
SORT1-208ENST00000495777 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
SORT1-208ENST00000495777 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
SORT1-208ENST00000495777 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
SORT1-208ENST00000495777 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
SORT1-208ENST00000495777 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
SORT1-208ENST00000495777 FOXO3O43524 673 aa13.16□□□□□ -0.3
SORT1-208ENST00000495777 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
SORT1-208ENST00000495777 PLEKHH1Q9ULM0 1364 aa13.16□□□□□ -0.3
SORT1-208ENST00000495777 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
SORT1-208ENST00000495777 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
SORT1-208ENST00000495777 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
SORT1-208ENST00000495777 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
SORT1-208ENST00000495777 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
SORT1-208ENST00000495777 STK26Q9P289 416 aa13.14□□□□□ -0.31
SORT1-208ENST00000495777 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
SORT1-208ENST00000495777 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
SORT1-208ENST00000495777 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SORT1-208ENST00000495777 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
SORT1-208ENST00000495777 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
SORT1-208ENST00000495777 EP400Q96L91 3159 aa13.12□□□□□ -0.31
SORT1-208ENST00000495777 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
SORT1-208ENST00000495777 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
SORT1-208ENST00000495777 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
SORT1-208ENST00000495777 SLIT2O94813 1529 aa13.11□□□□□ -0.31
SORT1-208ENST00000495777 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
SORT1-208ENST00000495777 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
SORT1-208ENST00000495777 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
SORT1-208ENST00000495777 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
SORT1-208ENST00000495777 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
SORT1-208ENST00000495777 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
SORT1-208ENST00000495777 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
SORT1-208ENST00000495777 RALGAPBQ86X10 1494 aa13.08□□□□□ -0.32
SORT1-208ENST00000495777 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.32
SORT1-208ENST00000495777 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
SORT1-208ENST00000495777 GLI3P10071 1580 aa13.07□□□□□ -0.32
SORT1-208ENST00000495777 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
SORT1-208ENST00000495777 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SORT1-208ENST00000495777 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
SORT1-208ENST00000495777 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
SORT1-208ENST00000495777 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
SORT1-208ENST00000495777 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
SORT1-208ENST00000495777 PSME1Q06323 249 aa13.04□□□□□ -0.32
SORT1-208ENST00000495777 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
SORT1-208ENST00000495777 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
SORT1-208ENST00000495777 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
SORT1-208ENST00000495777 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
SORT1-208ENST00000495777 VPS72Q15906 364 aa13.03□□□□□ -0.32
SORT1-208ENST00000495777 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
SORT1-208ENST00000495777 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
SORT1-208ENST00000495777 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
SORT1-208ENST00000495777 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
SORT1-208ENST00000495777 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
SORT1-208ENST00000495777 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
SORT1-208ENST00000495777 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
SORT1-208ENST00000495777 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
SORT1-208ENST00000495777 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
SORT1-208ENST00000495777 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
SORT1-208ENST00000495777 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
SORT1-208ENST00000495777 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
SORT1-208ENST00000495777 POGKQ9P215 609 aa12.98□□□□□ -0.33
SORT1-208ENST00000495777 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
SORT1-208ENST00000495777 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
SORT1-208ENST00000495777 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
SORT1-208ENST00000495777 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
SORT1-208ENST00000495777 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
SORT1-208ENST00000495777 TULP4Q9NRJ4 1543 aa12.96□□□□□ -0.33
SORT1-208ENST00000495777 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.34
SORT1-208ENST00000495777 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
SORT1-208ENST00000495777 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
SORT1-208ENST00000495777 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
SORT1-208ENST00000495777 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
SORT1-208ENST00000495777 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
SORT1-208ENST00000495777 ALS2Q96Q42 1657 aa12.94□□□□□ -0.34
SORT1-208ENST00000495777 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
SORT1-208ENST00000495777 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
SORT1-208ENST00000495777 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
SORT1-208ENST00000495777 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
SORT1-208ENST00000495777 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
SORT1-208ENST00000495777 BRWD3Q6RI45 1802 aa12.93□□□□□ -0.34
SORT1-208ENST00000495777 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
SORT1-208ENST00000495777 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
SORT1-208ENST00000495777 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
SORT1-208ENST00000495777 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
SORT1-208ENST00000495777 BTG4Q9NY30 223 aa12.92□□□□□ -0.34
SORT1-208ENST00000495777 HRCP23327 699 aa12.91□□□□□ -0.34
SORT1-208ENST00000495777 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms