RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 XRN1Q8IZH2 1706 aaKnown RBP21.81■■□□□ 1.08
PHF1-211ENST00000495509 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
PHF1-211ENST00000495509 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
PHF1-211ENST00000495509 TULP4Q9NRJ4 1543 aa21.76■■□□□ 1.07
PHF1-211ENST00000495509 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
PHF1-211ENST00000495509 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
PHF1-211ENST00000495509 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.76■■□□□ 1.07
PHF1-211ENST00000495509 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
PHF1-211ENST00000495509 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
PHF1-211ENST00000495509 CDK19Q9BWU1 502 aa21.74■■□□□ 1.07
PHF1-211ENST00000495509 STRCP1A6NGW2 1772 aa21.72■■□□□ 1.07
PHF1-211ENST00000495509 SRPK2P78362 688 aaKnown RBP21.71■■□□□ 1.07
PHF1-211ENST00000495509 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
PHF1-211ENST00000495509 WASLO00401 505 aaPredicted RBP21.7■■□□□ 1.06
PHF1-211ENST00000495509 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
PHF1-211ENST00000495509 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
PHF1-211ENST00000495509 PUS7Q96PZ0 661 aaKnown RBP21.67■■□□□ 1.06
PHF1-211ENST00000495509 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
PHF1-211ENST00000495509 ZNF335Q9H4Z2 1342 aaPredicted RBP21.67■■□□□ 1.06
PHF1-211ENST00000495509 SLC12A5Q9H2X9 1139 aa21.66■■□□□ 1.06
PHF1-211ENST00000495509 MYOM1P52179 1685 aa21.66■■□□□ 1.06
PHF1-211ENST00000495509 TMC1Q8TDI8 760 aa21.66■■□□□ 1.06
PHF1-211ENST00000495509 PANK3Q9H999 370 aa21.66■■□□□ 1.06
PHF1-211ENST00000495509 NUTM2FA1L443 756 aa21.64■■□□□ 1.06
PHF1-211ENST00000495509 ADGRB2O60241 1585 aa21.63■■□□□ 1.05
PHF1-211ENST00000495509 NKTRP30414 1462 aaKnown RBP21.62■■□□□ 1.05
PHF1-211ENST00000495509 NALCNQ8IZF0 1738 aa21.62■■□□□ 1.05
PHF1-211ENST00000495509 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
PHF1-211ENST00000495509 NUDT16Q96DE0 195 aaKnown RBP21.61■■□□□ 1.05
PHF1-211ENST00000495509 PRR36Q9H6K5 1346 aa21.61■■□□□ 1.05
PHF1-211ENST00000495509 PER1O15534 1290 aaPredicted RBP21.6■■□□□ 1.05
PHF1-211ENST00000495509 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
PHF1-211ENST00000495509 TMEM94Q12767 1356 aa21.59■■□□□ 1.05
PHF1-211ENST00000495509 ATAD2Q6PL18 1390 aa21.59■■□□□ 1.05
PHF1-211ENST00000495509 MIER1Q8N108 512 aa21.59■■□□□ 1.05
PHF1-211ENST00000495509 ADGRL3Q9HAR2 1447 aa21.58■■□□□ 1.05
PHF1-211ENST00000495509 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
PHF1-211ENST00000495509 CARD14Q9BXL6 1004 aa21.57■■□□□ 1.04
PHF1-211ENST00000495509 CCDC61Q9Y6R9 512 aa21.56■■□□□ 1.04
PHF1-211ENST00000495509 RGPD8O14715 1765 aaPredicted RBP21.55■■□□□ 1.04
PHF1-211ENST00000495509 ATP7BP35670 1465 aa21.55■■□□□ 1.04
PHF1-211ENST00000495509 XIRP1Q702N8 1843 aaKnown RBP21.54■■□□□ 1.04
PHF1-211ENST00000495509 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
PHF1-211ENST00000495509 USP32Q8NFA0 1604 aa21.54■■□□□ 1.04
PHF1-211ENST00000495509 PPIP5K1Q6PFW1 1433 aa21.54■■□□□ 1.04
PHF1-211ENST00000495509 LRRC7Q96NW7 1537 aa21.54■■□□□ 1.04
PHF1-211ENST00000495509 FMN2Q9NZ56 1722 aa21.53■■□□□ 1.04
PHF1-211ENST00000495509 CDC42BPGQ6DT37 1551 aa21.52■■□□□ 1.04
PHF1-211ENST00000495509 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.04
PHF1-211ENST00000495509 NINLQ9Y2I6 1382 aa21.51■■□□□ 1.03
PHF1-211ENST00000495509 ANP32CO43423 234 aa21.51■■□□□ 1.03
PHF1-211ENST00000495509 KNSTRNQ9Y448 316 aa21.51■■□□□ 1.03
PHF1-211ENST00000495509 A0A1W2PP64 1363 aa21.5■■□□□ 1.03
PHF1-211ENST00000495509 ANKRD36BQ8N2N9 1353 aa21.5■■□□□ 1.03
PHF1-211ENST00000495509 NCOA3Q9Y6Q9 1424 aa21.5■■□□□ 1.03
PHF1-211ENST00000495509 TERF2IPQ9NYB0 399 aa21.49■■□□□ 1.03
PHF1-211ENST00000495509 PMFBP1Q8TBY8 1022 aa21.48■■□□□ 1.03
PHF1-211ENST00000495509 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
PHF1-211ENST00000495509 TOPAZ1Q8N9V7 1692 aa21.48■■□□□ 1.03
PHF1-211ENST00000495509 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
PHF1-211ENST00000495509 CC2D1BQ5T0F9 858 aaKnown RBP21.47■■□□□ 1.03
PHF1-211ENST00000495509 ANKARQ7Z5J8 1434 aa21.47■■□□□ 1.03
PHF1-211ENST00000495509 NSD3Q9BZ95 1437 aa21.47■■□□□ 1.03
PHF1-211ENST00000495509 HDGFL2Q7Z4V5 671 aaPredicted RBP21.46■■□□□ 1.03
PHF1-211ENST00000495509 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
PHF1-211ENST00000495509 ATF3P18847 181 aa21.46■■□□□ 1.03
PHF1-211ENST00000495509 ACEP12821 1306 aa21.46■■□□□ 1.03
PHF1-211ENST00000495509 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
PHF1-211ENST00000495509 MSH6P52701 1360 aa21.45■■□□□ 1.02
PHF1-211ENST00000495509 ESCO1Q5FWF5 840 aa21.43■■□□□ 1.02
PHF1-211ENST00000495509 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
PHF1-211ENST00000495509 LTBP4Q8N2S1 1624 aa21.43■■□□□ 1.02
PHF1-211ENST00000495509 ITSN1Q15811 1721 aa21.43■■□□□ 1.02
PHF1-211ENST00000495509 KTN1Q86UP2 1357 aaKnown RBP21.43■■□□□ 1.02
PHF1-211ENST00000495509 CADPS2Q86UW7 1296 aa21.41■■□□□ 1.02
PHF1-211ENST00000495509 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
PHF1-211ENST00000495509 DCCP43146 1447 aa21.41■■□□□ 1.02
PHF1-211ENST00000495509 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
PHF1-211ENST00000495509 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
PHF1-211ENST00000495509 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
PHF1-211ENST00000495509 AKAP12Q02952 1782 aa21.4■■□□□ 1.02
PHF1-211ENST00000495509 MST1RQ04912 1400 aa21.4■■□□□ 1.02
PHF1-211ENST00000495509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
PHF1-211ENST00000495509 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
PHF1-211ENST00000495509 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
PHF1-211ENST00000495509 FYB1O15117 783 aa21.37■■□□□ 1.01
PHF1-211ENST00000495509 MON2Q7Z3U7 1717 aa21.37■■□□□ 1.01
PHF1-211ENST00000495509 NPC1L1Q9UHC9 1359 aa21.37■■□□□ 1.01
PHF1-211ENST00000495509 RALBP1Q15311 655 aa21.36■■□□□ 1.01
PHF1-211ENST00000495509 GGNBP2Q9H3C7 697 aa21.36■■□□□ 1.01
PHF1-211ENST00000495509 PARD3Q8TEW0 1356 aa21.35■■□□□ 1.01
PHF1-211ENST00000495509 USP6P35125 1406 aa21.35■■□□□ 1.01
PHF1-211ENST00000495509 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
PHF1-211ENST00000495509 FOXO3O43524 673 aa21.34■■□□□ 1.01
PHF1-211ENST00000495509 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
PHF1-211ENST00000495509 SLAIN2Q9P270 581 aa21.34■■□□□ 1.01
PHF1-211ENST00000495509 NME9Q86XW9 330 aa21.33■■□□□ 1.01
PHF1-211ENST00000495509 ZRANB1Q9UGI0 708 aa21.33■■□□□ 1.01
PHF1-211ENST00000495509 TTC21BQ7Z4L5 1316 aa21.33■■□□□ 1.01
PHF1-211ENST00000495509 SSH2Q76I76 1423 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms