RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 POTEAQ6S8J7 498 aa20.93■□□□□ 0.94
RPRD1B-206ENST00000495457 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
RPRD1B-206ENST00000495457 LRRC59Q96AG4 307 aaKnown RBP20.9■□□□□ 0.94
RPRD1B-206ENST00000495457 CDC42BPGQ6DT37 1551 aa20.89■□□□□ 0.94
RPRD1B-206ENST00000495457 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.93
RPRD1B-206ENST00000495457 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.93
RPRD1B-206ENST00000495457 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.93
RPRD1B-206ENST00000495457 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
RPRD1B-206ENST00000495457 KNDC1Q76NI1 1749 aa20.89■□□□□ 0.93
RPRD1B-206ENST00000495457 NUTM2FA1L443 756 aa20.88■□□□□ 0.93
RPRD1B-206ENST00000495457 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
RPRD1B-206ENST00000495457 DCAF11Q8TEB1 546 aa20.88■□□□□ 0.93
RPRD1B-206ENST00000495457 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
RPRD1B-206ENST00000495457 ESCO1Q5FWF5 840 aa20.87■□□□□ 0.93
RPRD1B-206ENST00000495457 PNPLA6Q8IY17 1366 aa20.85■□□□□ 0.93
RPRD1B-206ENST00000495457 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
RPRD1B-206ENST00000495457 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
RPRD1B-206ENST00000495457 LAMC1P11047 1609 aa20.85■□□□□ 0.93
RPRD1B-206ENST00000495457 SAFB2Q14151 953 aaKnown RBP eCLIP20.83■□□□□ 0.93
RPRD1B-206ENST00000495457 PRAM1Q96QH2 718 aa20.83■□□□□ 0.93
RPRD1B-206ENST00000495457 ADGRB1O14514 1584 aa20.82■□□□□ 0.92
RPRD1B-206ENST00000495457 FOXO3O43524 673 aa20.81■□□□□ 0.92
RPRD1B-206ENST00000495457 XPCQ01831 940 aaPredicted RBP20.8■□□□□ 0.92
RPRD1B-206ENST00000495457 NPHP3Q7Z494 1330 aa20.79■□□□□ 0.92
RPRD1B-206ENST00000495457 TRAK1Q9UPV9 953 aa20.79■□□□□ 0.92
RPRD1B-206ENST00000495457 ZNF772Q68DY9 489 aaPredicted RBP20.78■□□□□ 0.92
RPRD1B-206ENST00000495457 STAC3Q96MF2 364 aa20.78■□□□□ 0.92
RPRD1B-206ENST00000495457 POGKQ9P215 609 aa20.78■□□□□ 0.92
RPRD1B-206ENST00000495457 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
RPRD1B-206ENST00000495457 FMN2Q9NZ56 1722 aa20.77■□□□□ 0.92
RPRD1B-206ENST00000495457 PXDNQ92626 1479 aa20.76■□□□□ 0.91
RPRD1B-206ENST00000495457 C8orf37Q96NL8 207 aa20.76■□□□□ 0.91
RPRD1B-206ENST00000495457 AFF2P51816 1311 aa20.76■□□□□ 0.91
RPRD1B-206ENST00000495457 ADAMTS2O95450 1211 aa20.75■□□□□ 0.91
RPRD1B-206ENST00000495457 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
RPRD1B-206ENST00000495457 MINK1Q8N4C8 1332 aaPredicted RBP20.71■□□□□ 0.91
RPRD1B-206ENST00000495457 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.9
RPRD1B-206ENST00000495457 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
RPRD1B-206ENST00000495457 COL22A1Q8NFW1 1626 aaPredicted RBP20.68■□□□□ 0.9
RPRD1B-206ENST00000495457 KIF1AQ12756 1690 aa20.68■□□□□ 0.9
RPRD1B-206ENST00000495457 RXRBP28702 533 aa20.68■□□□□ 0.9
RPRD1B-206ENST00000495457 KRT28Q7Z3Y7 464 aa20.68■□□□□ 0.9
RPRD1B-206ENST00000495457 ADGRB2O60241 1585 aa20.68■□□□□ 0.9
RPRD1B-206ENST00000495457 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
RPRD1B-206ENST00000495457 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
RPRD1B-206ENST00000495457 SPATA31A3Q5VYP0 1347 aa20.66■□□□□ 0.9
RPRD1B-206ENST00000495457 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
RPRD1B-206ENST00000495457 RGPD8O14715 1765 aaPredicted RBP20.65■□□□□ 0.9
RPRD1B-206ENST00000495457 USP32Q8NFA0 1604 aa20.65■□□□□ 0.9
RPRD1B-206ENST00000495457 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
RPRD1B-206ENST00000495457 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
RPRD1B-206ENST00000495457 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
RPRD1B-206ENST00000495457 WASLO00401 505 aaPredicted RBP20.64■□□□□ 0.89
RPRD1B-206ENST00000495457 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
RPRD1B-206ENST00000495457 USP21Q9UK80 565 aa20.62■□□□□ 0.89
RPRD1B-206ENST00000495457 ARHGEF28Q8N1W1 1705 aaKnown RBP20.61■□□□□ 0.89
RPRD1B-206ENST00000495457 PSME1Q06323 249 aa20.61■□□□□ 0.89
RPRD1B-206ENST00000495457 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
RPRD1B-206ENST00000495457 FNBP4Q8N3X1 1017 aaPredicted RBP20.61■□□□□ 0.89
RPRD1B-206ENST00000495457 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
RPRD1B-206ENST00000495457 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
RPRD1B-206ENST00000495457 EIF3AQ14152 1382 aaKnown RBP20.59■□□□□ 0.89
RPRD1B-206ENST00000495457 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
RPRD1B-206ENST00000495457 RBM6P78332 1123 aaKnown RBP20.59■□□□□ 0.89
RPRD1B-206ENST00000495457 SBNO1A3KN83 1393 aa20.59■□□□□ 0.89
RPRD1B-206ENST00000495457 KIAA1210Q9ULL0 1709 aa20.58■□□□□ 0.89
RPRD1B-206ENST00000495457 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.89
RPRD1B-206ENST00000495457 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.89
RPRD1B-206ENST00000495457 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
RPRD1B-206ENST00000495457 RGS12O14924 1447 aa20.56■□□□□ 0.88
RPRD1B-206ENST00000495457 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
RPRD1B-206ENST00000495457 CDK19Q9BWU1 502 aa20.55■□□□□ 0.88
RPRD1B-206ENST00000495457 TRPC5Q9UL62 973 aaPredicted RBP20.55■□□□□ 0.88
RPRD1B-206ENST00000495457 ATP7BP35670 1465 aa20.55■□□□□ 0.88
RPRD1B-206ENST00000495457 BCL9LQ86UU0 1499 aa20.55■□□□□ 0.88
RPRD1B-206ENST00000495457 ATRNO75882 1429 aa20.53■□□□□ 0.88
RPRD1B-206ENST00000495457 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
RPRD1B-206ENST00000495457 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
RPRD1B-206ENST00000495457 ARHGEF10O15013 1369 aa20.53■□□□□ 0.88
RPRD1B-206ENST00000495457 GPRASP1Q5JY77 1395 aa20.53■□□□□ 0.88
RPRD1B-206ENST00000495457 MARF1Q9Y4F3 1742 aaKnown RBP20.51■□□□□ 0.87
RPRD1B-206ENST00000495457 UPF1Q92900 1129 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPRD1B-206ENST00000495457 CENPJQ9HC77 1338 aaPredicted RBP20.51■□□□□ 0.87
RPRD1B-206ENST00000495457 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
RPRD1B-206ENST00000495457 TRPM3Q9HCF6 1732 aaPredicted RBP20.5■□□□□ 0.87
RPRD1B-206ENST00000495457 SLIT2O94813 1529 aa20.49■□□□□ 0.87
RPRD1B-206ENST00000495457 UNC5CLQ8IV45 518 aa20.48■□□□□ 0.87
RPRD1B-206ENST00000495457 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
RPRD1B-206ENST00000495457 CCDC61Q9Y6R9 512 aa20.47■□□□□ 0.87
RPRD1B-206ENST00000495457 GJD4Q96KN9 370 aaPredicted RBP20.46■□□□□ 0.87
RPRD1B-206ENST00000495457 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.87
RPRD1B-206ENST00000495457 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 ABCA3Q99758 1704 aa20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 NBPF8Q3BBV2 869 aa20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 ACEP12821 1306 aa20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.86
RPRD1B-206ENST00000495457 POLR3AO14802 1390 aaPredicted RBP20.44■□□□□ 0.86
RPRD1B-206ENST00000495457 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms