RNA–Protein interactions for RNA: ENST00000494926.5

TM2D1-210, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-210ENST00000494926 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
TM2D1-210ENST00000494926 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
TM2D1-210ENST00000494926 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
TM2D1-210ENST00000494926 MYOM2P54296 1465 aa17.04■□□□□ 0.32
TM2D1-210ENST00000494926 TECPR2O15040 1411 aa17.04■□□□□ 0.32
TM2D1-210ENST00000494926 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
TM2D1-210ENST00000494926 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
TM2D1-210ENST00000494926 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
TM2D1-210ENST00000494926 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
TM2D1-210ENST00000494926 CFAP70Q5T0N1 1121 aa17.01■□□□□ 0.31
TM2D1-210ENST00000494926 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
TM2D1-210ENST00000494926 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
TM2D1-210ENST00000494926 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
TM2D1-210ENST00000494926 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
TM2D1-210ENST00000494926 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
TM2D1-210ENST00000494926 AFF2P51816 1311 aa16.98■□□□□ 0.31
TM2D1-210ENST00000494926 ADAMTS2O95450 1211 aa16.98■□□□□ 0.31
TM2D1-210ENST00000494926 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
TM2D1-210ENST00000494926 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
TM2D1-210ENST00000494926 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
TM2D1-210ENST00000494926 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.31
TM2D1-210ENST00000494926 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.31
TM2D1-210ENST00000494926 PXDNQ92626 1479 aa16.96■□□□□ 0.31
TM2D1-210ENST00000494926 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
TM2D1-210ENST00000494926 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.3
TM2D1-210ENST00000494926 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
TM2D1-210ENST00000494926 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
TM2D1-210ENST00000494926 FOXO3O43524 673 aa16.94■□□□□ 0.3
TM2D1-210ENST00000494926 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
TM2D1-210ENST00000494926 PRAM1Q96QH2 718 aa16.93■□□□□ 0.3
TM2D1-210ENST00000494926 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
TM2D1-210ENST00000494926 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
TM2D1-210ENST00000494926 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
TM2D1-210ENST00000494926 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
TM2D1-210ENST00000494926 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
TM2D1-210ENST00000494926 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
TM2D1-210ENST00000494926 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
TM2D1-210ENST00000494926 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
TM2D1-210ENST00000494926 RXRBP28702 533 aa16.89■□□□□ 0.29
TM2D1-210ENST00000494926 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.29
TM2D1-210ENST00000494926 POGKQ9P215 609 aa16.89■□□□□ 0.29
TM2D1-210ENST00000494926 ADGRB2O60241 1585 aa16.89■□□□□ 0.29
TM2D1-210ENST00000494926 RGS12O14924 1447 aa16.88■□□□□ 0.29
TM2D1-210ENST00000494926 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
TM2D1-210ENST00000494926 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
TM2D1-210ENST00000494926 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
TM2D1-210ENST00000494926 USP21Q9UK80 565 aa16.84■□□□□ 0.29
TM2D1-210ENST00000494926 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
TM2D1-210ENST00000494926 HRCP23327 699 aa16.83■□□□□ 0.28
TM2D1-210ENST00000494926 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
TM2D1-210ENST00000494926 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
TM2D1-210ENST00000494926 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
TM2D1-210ENST00000494926 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
TM2D1-210ENST00000494926 TNS3Q68CZ2 1445 aa16.82■□□□□ 0.28
TM2D1-210ENST00000494926 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
TM2D1-210ENST00000494926 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
TM2D1-210ENST00000494926 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
TM2D1-210ENST00000494926 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
TM2D1-210ENST00000494926 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
TM2D1-210ENST00000494926 PLCH1Q4KWH8 1693 aa16.81■□□□□ 0.28
TM2D1-210ENST00000494926 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
TM2D1-210ENST00000494926 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
TM2D1-210ENST00000494926 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
TM2D1-210ENST00000494926 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
TM2D1-210ENST00000494926 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
TM2D1-210ENST00000494926 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
TM2D1-210ENST00000494926 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
TM2D1-210ENST00000494926 ATRNO75882 1429 aa16.79■□□□□ 0.28
TM2D1-210ENST00000494926 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
TM2D1-210ENST00000494926 PSME1Q06323 249 aa16.77■□□□□ 0.28
TM2D1-210ENST00000494926 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
TM2D1-210ENST00000494926 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.28
TM2D1-210ENST00000494926 ALS2Q96Q42 1657 aa16.77■□□□□ 0.28
TM2D1-210ENST00000494926 FNBP4Q8N3X1 1017 aaPredicted RBP16.76■□□□□ 0.27
TM2D1-210ENST00000494926 ATP7BP35670 1465 aa16.75■□□□□ 0.27
TM2D1-210ENST00000494926 WASLO00401 505 aaPredicted RBP16.75■□□□□ 0.27
TM2D1-210ENST00000494926 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
TM2D1-210ENST00000494926 GLI3P10071 1580 aa16.74■□□□□ 0.27
TM2D1-210ENST00000494926 NBPF1Q3BBV0 1214 aa16.74■□□□□ 0.27
TM2D1-210ENST00000494926 QRICH2Q9H0J4 1663 aa16.74■□□□□ 0.27
TM2D1-210ENST00000494926 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
TM2D1-210ENST00000494926 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
TM2D1-210ENST00000494926 CRYBG1Q9Y4K1 1723 aa16.73■□□□□ 0.27
TM2D1-210ENST00000494926 SLIT2O94813 1529 aa16.72■□□□□ 0.27
TM2D1-210ENST00000494926 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
TM2D1-210ENST00000494926 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
TM2D1-210ENST00000494926 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
TM2D1-210ENST00000494926 BRWD3Q6RI45 1802 aa16.72■□□□□ 0.27
TM2D1-210ENST00000494926 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
TM2D1-210ENST00000494926 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
TM2D1-210ENST00000494926 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
TM2D1-210ENST00000494926 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
TM2D1-210ENST00000494926 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
TM2D1-210ENST00000494926 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
TM2D1-210ENST00000494926 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
TM2D1-210ENST00000494926 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
TM2D1-210ENST00000494926 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
TM2D1-210ENST00000494926 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
TM2D1-210ENST00000494926 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
TM2D1-210ENST00000494926 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms