RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
TRIM2-209ENST00000494872 POLR3AO14802 1390 aaPredicted RBP15.31■□□□□ 0.04
TRIM2-209ENST00000494872 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
TRIM2-209ENST00000494872 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
TRIM2-209ENST00000494872 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
TRIM2-209ENST00000494872 IGHDP01880 384 aa15.29■□□□□ 0.04
TRIM2-209ENST00000494872 NPATQ14207 1427 aa15.29■□□□□ 0.04
TRIM2-209ENST00000494872 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
TRIM2-209ENST00000494872 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
TRIM2-209ENST00000494872 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
TRIM2-209ENST00000494872 FRMPD1Q5SYB0 1578 aa15.29■□□□□ 0.04
TRIM2-209ENST00000494872 USP19O94966 1318 aa15.28■□□□□ 0.04
TRIM2-209ENST00000494872 BECN1Q14457 450 aa15.28■□□□□ 0.04
TRIM2-209ENST00000494872 GGT6Q6P531 493 aa15.28■□□□□ 0.04
TRIM2-209ENST00000494872 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.04
TRIM2-209ENST00000494872 PPLO60437 1756 aa15.27■□□□□ 0.04
TRIM2-209ENST00000494872 WWC1Q8IX03 1113 aa15.27■□□□□ 0.03
TRIM2-209ENST00000494872 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.03
TRIM2-209ENST00000494872 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
TRIM2-209ENST00000494872 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
TRIM2-209ENST00000494872 ABCC3O15438 1527 aa15.25■□□□□ 0.03
TRIM2-209ENST00000494872 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
TRIM2-209ENST00000494872 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
TRIM2-209ENST00000494872 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
TRIM2-209ENST00000494872 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
TRIM2-209ENST00000494872 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
TRIM2-209ENST00000494872 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
TRIM2-209ENST00000494872 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
TRIM2-209ENST00000494872 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
TRIM2-209ENST00000494872 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
TRIM2-209ENST00000494872 COG6Q9Y2V7 657 aa15.23■□□□□ 0.03
TRIM2-209ENST00000494872 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
TRIM2-209ENST00000494872 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
TRIM2-209ENST00000494872 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
TRIM2-209ENST00000494872 SLC12A5Q9H2X9 1139 aa15.22■□□□□ 0.03
TRIM2-209ENST00000494872 IQSEC2Q5JU85 1478 aa15.22■□□□□ 0.03
TRIM2-209ENST00000494872 WDR63Q8IWG1 891 aa15.21■□□□□ 0.03
TRIM2-209ENST00000494872 PANK1Q8TE04 598 aa15.21■□□□□ 0.03
TRIM2-209ENST00000494872 NEO1Q92859 1461 aa15.21■□□□□ 0.03
TRIM2-209ENST00000494872 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
TRIM2-209ENST00000494872 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.03
TRIM2-209ENST00000494872 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.03
TRIM2-209ENST00000494872 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.02
TRIM2-209ENST00000494872 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
TRIM2-209ENST00000494872 VGFO15240 615 aaPredicted RBP15.2■□□□□ 0.02
TRIM2-209ENST00000494872 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
TRIM2-209ENST00000494872 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
TRIM2-209ENST00000494872 SEC24BO95487 1268 aa15.19■□□□□ 0.02
TRIM2-209ENST00000494872 FAM43AQ8N2R8 423 aa15.19■□□□□ 0.02
TRIM2-209ENST00000494872 EVC2Q86UK5 1308 aa15.18■□□□□ 0.02
TRIM2-209ENST00000494872 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
TRIM2-209ENST00000494872 GLI2P10070 1586 aa15.17■□□□□ 0.02
TRIM2-209ENST00000494872 TBC1D32Q96NH3 1257 aa15.17■□□□□ 0.02
TRIM2-209ENST00000494872 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
TRIM2-209ENST00000494872 NEXMIFQ5QGS0 1516 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 CFAP65Q6ZU64 1925 aaKnown RBP15.16■□□□□ 0.02
TRIM2-209ENST00000494872 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
TRIM2-209ENST00000494872 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 TCP11L2Q8N4U5 519 aa15.16■□□□□ 0.02
TRIM2-209ENST00000494872 NSD2O96028 1365 aa15.15■□□□□ 0.02
TRIM2-209ENST00000494872 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
TRIM2-209ENST00000494872 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
TRIM2-209ENST00000494872 PCDHB15Q9Y5E8 787 aa15.15■□□□□ 0.02
TRIM2-209ENST00000494872 DIP2CQ9Y2E4 1556 aa15.15■□□□□ 0.02
TRIM2-209ENST00000494872 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
TRIM2-209ENST00000494872 ANKRD36BQ8N2N9 1353 aa15.14■□□□□ 0.01
TRIM2-209ENST00000494872 MTHFSP49914 203 aa15.14■□□□□ 0.01
TRIM2-209ENST00000494872 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
TRIM2-209ENST00000494872 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
TRIM2-209ENST00000494872 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
TRIM2-209ENST00000494872 TULP4Q9NRJ4 1543 aa15.13■□□□□ 0.01
TRIM2-209ENST00000494872 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
TRIM2-209ENST00000494872 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
TRIM2-209ENST00000494872 RLBP1P12271 317 aa15.12■□□□□ 0.01
TRIM2-209ENST00000494872 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
TRIM2-209ENST00000494872 POGKQ9P215 609 aa15.12■□□□□ 0.01
TRIM2-209ENST00000494872 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
TRIM2-209ENST00000494872 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
TRIM2-209ENST00000494872 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
TRIM2-209ENST00000494872 IDI1Q13907 227 aa15.11■□□□□ 0.01
TRIM2-209ENST00000494872 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
TRIM2-209ENST00000494872 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
TRIM2-209ENST00000494872 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
TRIM2-209ENST00000494872 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
TRIM2-209ENST00000494872 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
TRIM2-209ENST00000494872 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
TRIM2-209ENST00000494872 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
TRIM2-209ENST00000494872 CABP2Q9NPB3 220 aa15.09■□□□□ 0.01
TRIM2-209ENST00000494872 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
TRIM2-209ENST00000494872 RICTORQ6R327 1708 aa15.08■□□□□ 0.01
TRIM2-209ENST00000494872 TNNQ9UQP3 1299 aa15.07■□□□□ 0
TRIM2-209ENST00000494872 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
TRIM2-209ENST00000494872 BCL2L13Q9BXK5 485 aa15.06■□□□□ 0
TRIM2-209ENST00000494872 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ 0
TRIM2-209ENST00000494872 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ 0
TRIM2-209ENST00000494872 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ 0
TRIM2-209ENST00000494872 ABCC11Q96J66 1382 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms