RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TMEM2Q9UHN6 1383 aa14.32□□□□□ -0.12
PRPF4B-209ENST00000494674 FKBP8Q14318 412 aa14.32□□□□□ -0.12
PRPF4B-209ENST00000494674 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
PRPF4B-209ENST00000494674 CPS1P31327 1500 aa14.31□□□□□ -0.12
PRPF4B-209ENST00000494674 ANKRD36BQ8N2N9 1353 aa14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 ABCC11Q96J66 1382 aa14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 ANKRD26Q9UPS8 1709 aa14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 TECPR2O15040 1411 aa14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 METP08581 1390 aa14.3□□□□□ -0.12
PRPF4B-209ENST00000494674 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRPF4B-209ENST00000494674 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
PRPF4B-209ENST00000494674 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
PRPF4B-209ENST00000494674 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
PRPF4B-209ENST00000494674 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
PRPF4B-209ENST00000494674 SLIT1O75093 1534 aa14.28□□□□□ -0.12
PRPF4B-209ENST00000494674 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
PRPF4B-209ENST00000494674 ADAMTS13Q76LX8 1427 aa14.28□□□□□ -0.12
PRPF4B-209ENST00000494674 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
PRPF4B-209ENST00000494674 MINK1Q8N4C8 1332 aaPredicted RBP14.27□□□□□ -0.12
PRPF4B-209ENST00000494674 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.12
PRPF4B-209ENST00000494674 CEBPAP49715 358 aaPredicted RBP14.27□□□□□ -0.12
PRPF4B-209ENST00000494674 NEFLP07196 543 aa14.27□□□□□ -0.13
PRPF4B-209ENST00000494674 A0A1W2PP64 1363 aa14.26□□□□□ -0.13
PRPF4B-209ENST00000494674 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
PRPF4B-209ENST00000494674 MED14O60244 1454 aa14.26□□□□□ -0.13
PRPF4B-209ENST00000494674 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
PRPF4B-209ENST00000494674 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
PRPF4B-209ENST00000494674 RIMS1Q86UR5 1692 aaKnown RBP14.25□□□□□ -0.13
PRPF4B-209ENST00000494674 POGKQ9P215 609 aa14.25□□□□□ -0.13
PRPF4B-209ENST00000494674 PLEKHG1Q9ULL1 1385 aa14.25□□□□□ -0.13
PRPF4B-209ENST00000494674 FAM135BQ49AJ0 1406 aa14.25□□□□□ -0.13
PRPF4B-209ENST00000494674 ADAMTS8Q9UP79 889 aa14.24□□□□□ -0.13
PRPF4B-209ENST00000494674 NSD2O96028 1365 aa14.24□□□□□ -0.13
PRPF4B-209ENST00000494674 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
PRPF4B-209ENST00000494674 POLR3AO14802 1390 aaPredicted RBP14.23□□□□□ -0.13
PRPF4B-209ENST00000494674 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
PRPF4B-209ENST00000494674 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
PRPF4B-209ENST00000494674 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 LTKP29376 864 aa14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 HDGFP51858 240 aaKnown RBP14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.22□□□□□ -0.13
PRPF4B-209ENST00000494674 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
PRPF4B-209ENST00000494674 BCANQ96GW7 911 aa14.21□□□□□ -0.13
PRPF4B-209ENST00000494674 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
PRPF4B-209ENST00000494674 ATP7BP35670 1465 aa14.21□□□□□ -0.13
PRPF4B-209ENST00000494674 CEP170BQ9Y4F5 1589 aaPredicted RBP14.2□□□□□ -0.14
PRPF4B-209ENST00000494674 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
PRPF4B-209ENST00000494674 MON2Q7Z3U7 1717 aa14.2□□□□□ -0.14
PRPF4B-209ENST00000494674 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
PRPF4B-209ENST00000494674 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
PRPF4B-209ENST00000494674 MORC1Q86VD1 984 aa14.19□□□□□ -0.14
PRPF4B-209ENST00000494674 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
PRPF4B-209ENST00000494674 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
PRPF4B-209ENST00000494674 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
PRPF4B-209ENST00000494674 PTPRUQ92729 1446 aa14.19□□□□□ -0.14
PRPF4B-209ENST00000494674 IRX6P78412 446 aaPredicted RBP14.18□□□□□ -0.14
PRPF4B-209ENST00000494674 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
PRPF4B-209ENST00000494674 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
PRPF4B-209ENST00000494674 XRN1Q8IZH2 1706 aaKnown RBP14.18□□□□□ -0.14
PRPF4B-209ENST00000494674 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
PRPF4B-209ENST00000494674 ITSN1Q15811 1721 aa14.17□□□□□ -0.14
PRPF4B-209ENST00000494674 CDC42BPGQ6DT37 1551 aa14.17□□□□□ -0.14
PRPF4B-209ENST00000494674 TERF2IPQ9NYB0 399 aa14.16□□□□□ -0.14
PRPF4B-209ENST00000494674 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
PRPF4B-209ENST00000494674 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
PRPF4B-209ENST00000494674 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
PRPF4B-209ENST00000494674 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
PRPF4B-209ENST00000494674 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
PRPF4B-209ENST00000494674 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
PRPF4B-209ENST00000494674 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
PRPF4B-209ENST00000494674 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
PRPF4B-209ENST00000494674 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 IQSEC2Q5JU85 1478 aa14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 FYB1O15117 783 aa14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
PRPF4B-209ENST00000494674 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 MTHFSP49914 203 aa14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 GGNBP2Q9H3C7 697 aa14.12□□□□□ -0.15
PRPF4B-209ENST00000494674 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 PRR36Q9H6K5 1346 aa14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 CCDC146Q8IYE0 955 aa14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 TBX22Q9Y458 520 aa14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 EDC4Q6P2E9 1401 aaKnown RBP14.11□□□□□ -0.15
PRPF4B-209ENST00000494674 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
PRPF4B-209ENST00000494674 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
PRPF4B-209ENST00000494674 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
PRPF4B-209ENST00000494674 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.16
PRPF4B-209ENST00000494674 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
PRPF4B-209ENST00000494674 APAF1O14727 1248 aa14.08□□□□□ -0.16
PRPF4B-209ENST00000494674 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms