RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 ORAI2Q96SN7 254 aa10.76□□□□□ -0.69
FN1-225ENST00000494446 E9PCH4 1651 aa10.76□□□□□ -0.69
FN1-225ENST00000494446 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
FN1-225ENST00000494446 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
FN1-225ENST00000494446 RALGAPBQ86X10 1494 aa10.74□□□□□ -0.69
FN1-225ENST00000494446 MYOM2P54296 1465 aa10.74□□□□□ -0.69
FN1-225ENST00000494446 BAG6P46379 1132 aa10.73□□□□□ -0.69
FN1-225ENST00000494446 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
FN1-225ENST00000494446 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
FN1-225ENST00000494446 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
FN1-225ENST00000494446 METP08581 1390 aa10.72□□□□□ -0.69
FN1-225ENST00000494446 RGPD1P0DJD0 1748 aa10.71□□□□□ -0.69
FN1-225ENST00000494446 IQGAP3Q86VI3 1631 aa10.7□□□□□ -0.7
FN1-225ENST00000494446 XPCQ01831 940 aaPredicted RBP10.69□□□□□ -0.7
FN1-225ENST00000494446 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
FN1-225ENST00000494446 KRT27Q7Z3Y8 459 aa10.69□□□□□ -0.7
FN1-225ENST00000494446 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
FN1-225ENST00000494446 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
FN1-225ENST00000494446 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
FN1-225ENST00000494446 PLCH1Q4KWH8 1693 aa10.68□□□□□ -0.7
FN1-225ENST00000494446 SLIT2O94813 1529 aa10.68□□□□□ -0.7
FN1-225ENST00000494446 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 NPHP3Q7Z494 1330 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 A0A0G2JS52 829 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 MYT1Q01538 1121 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 PXDNQ92626 1479 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 NWD2Q9ULI1 1742 aa10.67□□□□□ -0.7
FN1-225ENST00000494446 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
FN1-225ENST00000494446 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.7
FN1-225ENST00000494446 FOXO3O43524 673 aa10.65□□□□□ -0.7
FN1-225ENST00000494446 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
FN1-225ENST00000494446 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
FN1-225ENST00000494446 VPS72Q15906 364 aa10.64□□□□□ -0.71
FN1-225ENST00000494446 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
FN1-225ENST00000494446 ONECUT3O60422 494 aaPredicted RBP10.63□□□□□ -0.71
FN1-225ENST00000494446 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
FN1-225ENST00000494446 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
FN1-225ENST00000494446 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
FN1-225ENST00000494446 CAMTA1Q9Y6Y1 1673 aa10.63□□□□□ -0.71
FN1-225ENST00000494446 KIF1BO60333 1816 aa10.63□□□□□ -0.71
FN1-225ENST00000494446 FAM182BQ5T319 152 aa10.62□□□□□ -0.71
FN1-225ENST00000494446 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
FN1-225ENST00000494446 EZH2Q15910 746 aaKnown RBP10.61□□□□□ -0.71
FN1-225ENST00000494446 PPP1R1BQ9UD71 204 aaPredicted RBP10.61□□□□□ -0.71
FN1-225ENST00000494446 RGPD8O14715 1765 aaPredicted RBP10.61□□□□□ -0.71
FN1-225ENST00000494446 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
FN1-225ENST00000494446 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
FN1-225ENST00000494446 CHD4Q14839 1912 aa10.6□□□□□ -0.71
FN1-225ENST00000494446 NEXMIFQ5QGS0 1516 aa10.6□□□□□ -0.71
FN1-225ENST00000494446 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
FN1-225ENST00000494446 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
FN1-225ENST00000494446 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
FN1-225ENST00000494446 FAM50AQ14320 339 aaKnown RBP10.59□□□□□ -0.71
FN1-225ENST00000494446 CABLES1Q8TDN4 633 aa10.59□□□□□ -0.71
FN1-225ENST00000494446 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.71
FN1-225ENST00000494446 NRAPQ86VF7 1730 aa10.58□□□□□ -0.72
FN1-225ENST00000494446 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
FN1-225ENST00000494446 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
FN1-225ENST00000494446 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
FN1-225ENST00000494446 RREB1Q92766 1687 aa10.57□□□□□ -0.72
FN1-225ENST00000494446 ADGRB2O60241 1585 aa10.57□□□□□ -0.72
FN1-225ENST00000494446 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
FN1-225ENST00000494446 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
FN1-225ENST00000494446 NUP155O75694 1391 aa10.56□□□□□ -0.72
FN1-225ENST00000494446 CLTCL1P53675 1640 aa10.56□□□□□ -0.72
FN1-225ENST00000494446 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
FN1-225ENST00000494446 APLP2Q06481 763 aa10.56□□□□□ -0.72
FN1-225ENST00000494446 KRT28Q7Z3Y7 464 aa10.56□□□□□ -0.72
FN1-225ENST00000494446 CAMKK2Q96RR4 588 aa10.56□□□□□ -0.72
FN1-225ENST00000494446 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
FN1-225ENST00000494446 TRIM37O94972 964 aa10.55□□□□□ -0.72
FN1-225ENST00000494446 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
FN1-225ENST00000494446 SPON1Q9HCB6 807 aa10.55□□□□□ -0.72
FN1-225ENST00000494446 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 APBA3O96018 575 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 C1QTNF8P60827 252 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 NAIPQ13075 1403 aa10.54□□□□□ -0.72
FN1-225ENST00000494446 KCNQ2O43526 872 aa10.53□□□□□ -0.72
FN1-225ENST00000494446 NBPF8Q3BBV2 869 aa10.53□□□□□ -0.72
FN1-225ENST00000494446 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
FN1-225ENST00000494446 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
FN1-225ENST00000494446 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
FN1-225ENST00000494446 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
FN1-225ENST00000494446 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
FN1-225ENST00000494446 PRAG1Q86YV5 1406 aa10.52□□□□□ -0.73
FN1-225ENST00000494446 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
FN1-225ENST00000494446 BTG4Q9NY30 223 aa10.52□□□□□ -0.73
FN1-225ENST00000494446 PPLO60437 1756 aa10.52□□□□□ -0.73
FN1-225ENST00000494446 PSME1Q06323 249 aa10.51□□□□□ -0.73
FN1-225ENST00000494446 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
FN1-225ENST00000494446 PARD3Q8TEW0 1356 aa10.51□□□□□ -0.73
FN1-225ENST00000494446 FAM196AQ6ZSG2 479 aa10.5□□□□□ -0.73
FN1-225ENST00000494446 STK26Q9P289 416 aa10.5□□□□□ -0.73
FN1-225ENST00000494446 CEP350Q5VT06 3117 aa10.49□□□□□ -0.73
FN1-225ENST00000494446 SPATA31A5Q5VU36 1347 aa10.49□□□□□ -0.73
FN1-225ENST00000494446 SPATA31A7Q8IWB4 1347 aa10.49□□□□□ -0.73
FN1-225ENST00000494446 ARHGEF10O15013 1369 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms