RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 PIK3C2GO75747 1445 aa35.52■■■■□ 3.28
TTC3-224ENST00000494243 TMEM132EQ6IEE7 984 aa35.52■■■■□ 3.28
TTC3-224ENST00000494243 CDC42BPGQ6DT37 1551 aa35.51■■■■□ 3.28
TTC3-224ENST00000494243 RXRBP28702 533 aa35.51■■■■□ 3.28
TTC3-224ENST00000494243 WAPLQ7Z5K2 1190 aa35.51■■■■□ 3.28
TTC3-224ENST00000494243 ABCC11Q96J66 1382 aa35.51■■■■□ 3.27
TTC3-224ENST00000494243 C8orf37Q96NL8 207 aa35.48■■■■□ 3.27
TTC3-224ENST00000494243 ESCO1Q5FWF5 840 aa35.45■■■■□ 3.27
TTC3-224ENST00000494243 PLEKHH1Q9ULM0 1364 aa35.45■■■■□ 3.27
TTC3-224ENST00000494243 RAB3GAP2Q9H2M9 1393 aa35.43■■■■□ 3.26
TTC3-224ENST00000494243 KNDC1Q76NI1 1749 aa35.43■■■■□ 3.26
TTC3-224ENST00000494243 CDK12Q9NYV4 1490 aaPredicted RBP35.42■■■■□ 3.26
TTC3-224ENST00000494243 ADAMTS2O95450 1211 aa35.42■■■■□ 3.26
TTC3-224ENST00000494243 C14orf93Q9H972 538 aaKnown RBP35.42■■■■□ 3.26
TTC3-224ENST00000494243 YTHDC2Q9H6S0 1430 aaKnown RBP35.41■■■■□ 3.26
TTC3-224ENST00000494243 QTRT2Q9H974 415 aaKnown RBP35.4■■■■□ 3.26
TTC3-224ENST00000494243 NRXN1Q9ULB1 1477 aa35.4■■■■□ 3.26
TTC3-224ENST00000494243 NPHP3Q7Z494 1330 aa35.39■■■■□ 3.26
TTC3-224ENST00000494243 UPF1Q92900 1129 aaKnown RBP eCLIP35.39■■■■□ 3.26
TTC3-224ENST00000494243 PXDNQ92626 1479 aa35.38■■■■□ 3.25
TTC3-224ENST00000494243 NGLY1Q96IV0 654 aa35.38■■■■□ 3.25
TTC3-224ENST00000494243 NUTM2FA1L443 756 aa35.37■■■■□ 3.25
TTC3-224ENST00000494243 FOXO3O43524 673 aa35.37■■■■□ 3.25
TTC3-224ENST00000494243 SIRT1Q96EB6 747 aa35.37■■■■□ 3.25
TTC3-224ENST00000494243 COL22A1Q8NFW1 1626 aaPredicted RBP35.36■■■■□ 3.25
TTC3-224ENST00000494243 MYOM2P54296 1465 aa35.35■■■■□ 3.25
TTC3-224ENST00000494243 CFAP70Q5T0N1 1121 aa35.35■■■■□ 3.25
TTC3-224ENST00000494243 RBM6P78332 1123 aaKnown RBP35.33■■■■□ 3.25
TTC3-224ENST00000494243 XPCQ01831 940 aaPredicted RBP35.33■■■■□ 3.25
TTC3-224ENST00000494243 FMN2Q9NZ56 1722 aa35.31■■■■□ 3.24
TTC3-224ENST00000494243 DHX57Q6P158 1386 aaKnown RBP35.28■■■■□ 3.24
TTC3-224ENST00000494243 FNBP4Q8N3X1 1017 aaPredicted RBP35.28■■■■□ 3.24
TTC3-224ENST00000494243 RGS12O14924 1447 aa35.28■■■■□ 3.24
TTC3-224ENST00000494243 USP21Q9UK80 565 aa35.26■■■■□ 3.24
TTC3-224ENST00000494243 PRAM1Q96QH2 718 aa35.2■■■■□ 3.23
TTC3-224ENST00000494243 KIF1AQ12756 1690 aa35.2■■■■□ 3.23
TTC3-224ENST00000494243 TRPC5Q9UL62 973 aaPredicted RBP35.19■■■■□ 3.22
TTC3-224ENST00000494243 SPATA31A3Q5VYP0 1347 aa35.18■■■■□ 3.22
TTC3-224ENST00000494243 SAFB2Q14151 953 aaKnown RBP eCLIP35.17■■■■□ 3.22
TTC3-224ENST00000494243 ATRNO75882 1429 aa35.16■■■■□ 3.22
TTC3-224ENST00000494243 RGPD8O14715 1765 aaPredicted RBP35.16■■■■□ 3.22
TTC3-224ENST00000494243 HRCP23327 699 aa35.16■■■■□ 3.22
TTC3-224ENST00000494243 KRT28Q7Z3Y7 464 aa35.16■■■■□ 3.22
TTC3-224ENST00000494243 ADGRB1O14514 1584 aa35.16■■■■□ 3.22
TTC3-224ENST00000494243 DLC1Q96QB1 1528 aa35.16■■■■□ 3.22
TTC3-224ENST00000494243 BCL9LQ86UU0 1499 aa35.15■■■■□ 3.22
TTC3-224ENST00000494243 MARF1Q9Y4F3 1742 aaKnown RBP35.15■■■■□ 3.22
TTC3-224ENST00000494243 PHF8Q9UPP1 1060 aa35.14■■■■□ 3.22
TTC3-224ENST00000494243 DCAF11Q8TEB1 546 aa35.11■■■■□ 3.21
TTC3-224ENST00000494243 POGKQ9P215 609 aa35.11■■■■□ 3.21
TTC3-224ENST00000494243 KDM2AQ9Y2K7 1162 aa35.11■■■■□ 3.21
TTC3-224ENST00000494243 TRAK1Q9UPV9 953 aa35.08■■■■□ 3.21
TTC3-224ENST00000494243 PSME1Q06323 249 aa35.05■■■■□ 3.2
TTC3-224ENST00000494243 USP32Q8NFA0 1604 aa35.05■■■■□ 3.2
TTC3-224ENST00000494243 ADGRB2O60241 1585 aa35.04■■■■□ 3.2
TTC3-224ENST00000494243 STAC3Q96MF2 364 aa35.04■■■■□ 3.2
TTC3-224ENST00000494243 TNS3Q68CZ2 1445 aa35.04■■■■□ 3.2
TTC3-224ENST00000494243 ANKARQ7Z5J8 1434 aa35.03■■■■□ 3.2
TTC3-224ENST00000494243 SLIT2O94813 1529 aa35.01■■■■□ 3.2
TTC3-224ENST00000494243 SBNO1A3KN83 1393 aa35.01■■■■□ 3.2
TTC3-224ENST00000494243 HIRIP3Q9BW71 556 aaPredicted RBP35.01■■■■□ 3.2
TTC3-224ENST00000494243 GJD4Q96KN9 370 aaPredicted RBP35■■■■□ 3.19
TTC3-224ENST00000494243 ATAD2Q6PL18 1390 aa35■■■■□ 3.19
TTC3-224ENST00000494243 PMFBP1Q8TBY8 1022 aa34.99■■■■□ 3.19
TTC3-224ENST00000494243 CABLES1Q8TDN4 633 aa34.99■■■■□ 3.19
TTC3-224ENST00000494243 UNC5CLQ8IV45 518 aa34.98■■■■□ 3.19
TTC3-224ENST00000494243 MINK1Q8N4C8 1332 aaPredicted RBP34.98■■■■□ 3.19
TTC3-224ENST00000494243 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.98■■■■□ 3.19
TTC3-224ENST00000494243 PRR36Q9H6K5 1346 aa34.95■■■■□ 3.19
TTC3-224ENST00000494243 ARHGEF10O15013 1369 aa34.92■■■■□ 3.18
TTC3-224ENST00000494243 WASLO00401 505 aaPredicted RBP34.92■■■■□ 3.18
TTC3-224ENST00000494243 LMOD2Q6P5Q4 547 aa34.92■■■■□ 3.18
TTC3-224ENST00000494243 HAP1P54257 671 aaPredicted RBP34.91■■■■□ 3.18
TTC3-224ENST00000494243 RALGAPBQ86X10 1494 aa34.9■■■■□ 3.18
TTC3-224ENST00000494243 PLEKHG5O94827 1062 aa34.9■■■■□ 3.18
TTC3-224ENST00000494243 GLI3P10071 1580 aa34.9■■■■□ 3.18
TTC3-224ENST00000494243 TULP4Q9NRJ4 1543 aa34.89■■■■□ 3.18
TTC3-224ENST00000494243 ABCA3Q99758 1704 aa34.89■■■■□ 3.18
TTC3-224ENST00000494243 EIF3AQ14152 1382 aaKnown RBP34.88■■■■□ 3.17
TTC3-224ENST00000494243 TRPM3Q9HCF6 1732 aaPredicted RBP34.88■■■■□ 3.17
TTC3-224ENST00000494243 ARHGEF28Q8N1W1 1705 aaKnown RBP34.85■■■■□ 3.17
TTC3-224ENST00000494243 GPRASP1Q5JY77 1395 aa34.83■■■■□ 3.17
TTC3-224ENST00000494243 FAM83GA6ND36 823 aa34.82■■■■□ 3.16
TTC3-224ENST00000494243 VPS72Q15906 364 aa34.82■■■■□ 3.16
TTC3-224ENST00000494243 PLCH1Q4KWH8 1693 aa34.82■■■■□ 3.16
TTC3-224ENST00000494243 ALS2Q96Q42 1657 aa34.81■■■■□ 3.16
TTC3-224ENST00000494243 NWD2Q9ULI1 1742 aa34.81■■■■□ 3.16
TTC3-224ENST00000494243 NGDNQ8NEJ9 315 aaKnown RBP34.77■■■■□ 3.16
TTC3-224ENST00000494243 CCDC125Q86Z20 511 aa34.76■■■■□ 3.16
TTC3-224ENST00000494243 NUDT16Q96DE0 195 aaKnown RBP34.76■■■■□ 3.16
TTC3-224ENST00000494243 ATP7BP35670 1465 aa34.76■■■■□ 3.15
TTC3-224ENST00000494243 ONECUT3O60422 494 aaPredicted RBP34.75■■■■□ 3.15
TTC3-224ENST00000494243 EP400Q96L91 3159 aa34.74■■■■□ 3.15
TTC3-224ENST00000494243 SEPT12Q8IYM1 358 aa34.74■■■■□ 3.15
TTC3-224ENST00000494243 KIAA1210Q9ULL0 1709 aa34.73■■■■□ 3.15
TTC3-224ENST00000494243 BRWD3Q6RI45 1802 aa34.73■■■■□ 3.15
TTC3-224ENST00000494243 NBPF1Q3BBV0 1214 aa34.72■■■■□ 3.15
TTC3-224ENST00000494243 CDK19Q9BWU1 502 aa34.72■■■■□ 3.15
TTC3-224ENST00000494243 CCDC9Q9Y3X0 531 aaKnown RBP34.71■■■■□ 3.15
TTC3-224ENST00000494243 PAK3O75914 559 aaPredicted RBP34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms