RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 LRRC59Q96AG4 307 aaKnown RBP21.65■■□□□ 1.06
ATG4B-223ENST00000493618 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.06
ATG4B-223ENST00000493618 TECPR2O15040 1411 aa21.63■■□□□ 1.05
ATG4B-223ENST00000493618 PNPLA6Q8IY17 1366 aa21.63■■□□□ 1.05
ATG4B-223ENST00000493618 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
ATG4B-223ENST00000493618 RGPD8O14715 1765 aaPredicted RBP21.62■■□□□ 1.05
ATG4B-223ENST00000493618 FMN2Q9NZ56 1722 aa21.62■■□□□ 1.05
ATG4B-223ENST00000493618 MYOM2P54296 1465 aa21.62■■□□□ 1.05
ATG4B-223ENST00000493618 NRXN1Q9ULB1 1477 aa21.61■■□□□ 1.05
ATG4B-223ENST00000493618 NUTM2FA1L443 756 aa21.61■■□□□ 1.05
ATG4B-223ENST00000493618 CFAP70Q5T0N1 1121 aa21.6■■□□□ 1.05
ATG4B-223ENST00000493618 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
ATG4B-223ENST00000493618 ESCO1Q5FWF5 840 aa21.59■■□□□ 1.05
ATG4B-223ENST00000493618 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
ATG4B-223ENST00000493618 C14orf93Q9H972 538 aaKnown RBP21.58■■□□□ 1.05
ATG4B-223ENST00000493618 AFF2P51816 1311 aa21.57■■□□□ 1.04
ATG4B-223ENST00000493618 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
ATG4B-223ENST00000493618 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
ATG4B-223ENST00000493618 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
ATG4B-223ENST00000493618 ADAMTS2O95450 1211 aa21.54■■□□□ 1.04
ATG4B-223ENST00000493618 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
ATG4B-223ENST00000493618 PXDNQ92626 1479 aa21.53■■□□□ 1.04
ATG4B-223ENST00000493618 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
ATG4B-223ENST00000493618 KDM2AQ9Y2K7 1162 aa21.53■■□□□ 1.04
ATG4B-223ENST00000493618 SAFB2Q14151 953 aaKnown RBP eCLIP21.52■■□□□ 1.04
ATG4B-223ENST00000493618 KIF1AQ12756 1690 aa21.52■■□□□ 1.04
ATG4B-223ENST00000493618 MARF1Q9Y4F3 1742 aaKnown RBP21.52■■□□□ 1.03
ATG4B-223ENST00000493618 FOXO3O43524 673 aa21.51■■□□□ 1.03
ATG4B-223ENST00000493618 NPHP3Q7Z494 1330 aa21.51■■□□□ 1.03
ATG4B-223ENST00000493618 RXRBP28702 533 aa21.49■■□□□ 1.03
ATG4B-223ENST00000493618 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
ATG4B-223ENST00000493618 PRAM1Q96QH2 718 aa21.49■■□□□ 1.03
ATG4B-223ENST00000493618 ADGRB1O14514 1584 aa21.48■■□□□ 1.03
ATG4B-223ENST00000493618 SIRT1Q96EB6 747 aa21.48■■□□□ 1.03
ATG4B-223ENST00000493618 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
ATG4B-223ENST00000493618 HRCP23327 699 aa21.47■■□□□ 1.03
ATG4B-223ENST00000493618 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
ATG4B-223ENST00000493618 USP32Q8NFA0 1604 aa21.45■■□□□ 1.02
ATG4B-223ENST00000493618 QTRT2Q9H974 415 aaKnown RBP21.45■■□□□ 1.02
ATG4B-223ENST00000493618 POGKQ9P215 609 aa21.45■■□□□ 1.02
ATG4B-223ENST00000493618 TRAK1Q9UPV9 953 aa21.45■■□□□ 1.02
ATG4B-223ENST00000493618 ADGRB2O60241 1585 aa21.42■■□□□ 1.02
ATG4B-223ENST00000493618 ARHGEF28Q8N1W1 1705 aaKnown RBP21.42■■□□□ 1.02
ATG4B-223ENST00000493618 CDK12Q9NYV4 1490 aaPredicted RBP21.41■■□□□ 1.02
ATG4B-223ENST00000493618 RGS12O14924 1447 aa21.4■■□□□ 1.02
ATG4B-223ENST00000493618 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
ATG4B-223ENST00000493618 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
ATG4B-223ENST00000493618 USP21Q9UK80 565 aa21.4■■□□□ 1.02
ATG4B-223ENST00000493618 PHF8Q9UPP1 1060 aa21.4■■□□□ 1.02
ATG4B-223ENST00000493618 MINK1Q8N4C8 1332 aaPredicted RBP21.39■■□□□ 1.01
ATG4B-223ENST00000493618 RBM6P78332 1123 aaKnown RBP21.39■■□□□ 1.01
ATG4B-223ENST00000493618 PLEKHG5O94827 1062 aa21.38■■□□□ 1.01
ATG4B-223ENST00000493618 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
ATG4B-223ENST00000493618 SPATA31A3Q5VYP0 1347 aa21.37■■□□□ 1.01
ATG4B-223ENST00000493618 PMFBP1Q8TBY8 1022 aa21.36■■□□□ 1.01
ATG4B-223ENST00000493618 UPF1Q92900 1129 aaKnown RBP eCLIP21.36■■□□□ 1.01
ATG4B-223ENST00000493618 FNBP4Q8N3X1 1017 aaPredicted RBP21.34■■□□□ 1.01
ATG4B-223ENST00000493618 TNS3Q68CZ2 1445 aa21.34■■□□□ 1.01
ATG4B-223ENST00000493618 ANKARQ7Z5J8 1434 aa21.34■■□□□ 1.01
ATG4B-223ENST00000493618 TRPM3Q9HCF6 1732 aaPredicted RBP21.34■■□□□ 1.01
ATG4B-223ENST00000493618 KIAA1210Q9ULL0 1709 aa21.34■■□□□ 1.01
ATG4B-223ENST00000493618 ATRNO75882 1429 aa21.33■■□□□ 1.01
ATG4B-223ENST00000493618 STAC3Q96MF2 364 aa21.33■■□□□ 1.01
ATG4B-223ENST00000493618 TRPC5Q9UL62 973 aaPredicted RBP21.33■■□□□ 1.01
ATG4B-223ENST00000493618 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
ATG4B-223ENST00000493618 PSME1Q06323 249 aa21.32■■□□□ 1
ATG4B-223ENST00000493618 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
ATG4B-223ENST00000493618 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
ATG4B-223ENST00000493618 ITSN1Q15811 1721 aa21.32■■□□□ 1
ATG4B-223ENST00000493618 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
ATG4B-223ENST00000493618 PRR36Q9H6K5 1346 aa21.31■■□□□ 1
ATG4B-223ENST00000493618 PLCH1Q4KWH8 1693 aa21.31■■□□□ 1
ATG4B-223ENST00000493618 CABLES1Q8TDN4 633 aa21.31■■□□□ 1
ATG4B-223ENST00000493618 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
ATG4B-223ENST00000493618 ALS2Q96Q42 1657 aa21.28■■□□□ 1
ATG4B-223ENST00000493618 SBNO1A3KN83 1393 aa21.28■■□□□ 1
ATG4B-223ENST00000493618 WASLO00401 505 aaPredicted RBP21.28■■□□□ 1
ATG4B-223ENST00000493618 EIF3AQ14152 1382 aaKnown RBP21.26■□□□□ 0.99
ATG4B-223ENST00000493618 SLIT2O94813 1529 aa21.25■□□□□ 0.99
ATG4B-223ENST00000493618 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
ATG4B-223ENST00000493618 GLI3P10071 1580 aa21.24■□□□□ 0.99
ATG4B-223ENST00000493618 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
ATG4B-223ENST00000493618 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
ATG4B-223ENST00000493618 ARHGEF10O15013 1369 aa21.23■□□□□ 0.99
ATG4B-223ENST00000493618 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
ATG4B-223ENST00000493618 CRYBG1Q9Y4K1 1723 aa21.23■□□□□ 0.99
ATG4B-223ENST00000493618 ATP7BP35670 1465 aa21.22■□□□□ 0.99
ATG4B-223ENST00000493618 UNC5CLQ8IV45 518 aa21.22■□□□□ 0.99
ATG4B-223ENST00000493618 GPRASP1Q5JY77 1395 aa21.22■□□□□ 0.99
ATG4B-223ENST00000493618 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
ATG4B-223ENST00000493618 GJD4Q96KN9 370 aaPredicted RBP21.21■□□□□ 0.99
ATG4B-223ENST00000493618 QRICH2Q9H0J4 1663 aa21.21■□□□□ 0.99
ATG4B-223ENST00000493618 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
ATG4B-223ENST00000493618 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
ATG4B-223ENST00000493618 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
ATG4B-223ENST00000493618 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
ATG4B-223ENST00000493618 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
ATG4B-223ENST00000493618 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
ATG4B-223ENST00000493618 PAK3O75914 559 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-223ENST00000493618 L3MBTL2Q969R5 705 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms