RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 POLR3GLQ9BT43 218 aa7.33□□□□□ -1.24
NEK4-205ENST00000493199 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
NEK4-205ENST00000493199 CADPS2Q86UW7 1296 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 C19orf44Q9H6X5 657 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 TERF2IPQ9NYB0 399 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 DLC1Q96QB1 1528 aa7.32□□□□□ -1.24
NEK4-205ENST00000493199 PIP4K2BP78356 416 aa7.31□□□□□ -1.24
NEK4-205ENST00000493199 ADAMTS13Q76LX8 1427 aa7.31□□□□□ -1.24
NEK4-205ENST00000493199 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
NEK4-205ENST00000493199 ZNF692Q9BU19 519 aaPredicted RBP7.31□□□□□ -1.24
NEK4-205ENST00000493199 MSH6P52701 1360 aa7.31□□□□□ -1.24
NEK4-205ENST00000493199 SCAF1Q9H7N4 1312 aaKnown RBP7.3□□□□□ -1.24
NEK4-205ENST00000493199 TECPR2O15040 1411 aa7.3□□□□□ -1.24
NEK4-205ENST00000493199 PTCH1Q13635 1447 aa7.3□□□□□ -1.24
NEK4-205ENST00000493199 SAFB2Q14151 953 aaKnown RBP eCLIP7.3□□□□□ -1.24
NEK4-205ENST00000493199 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
NEK4-205ENST00000493199 METP08581 1390 aa7.3□□□□□ -1.24
NEK4-205ENST00000493199 NKTRP30414 1462 aaKnown RBP7.3□□□□□ -1.24
NEK4-205ENST00000493199 WASLO00401 505 aaPredicted RBP7.29□□□□□ -1.24
NEK4-205ENST00000493199 KNSTRNQ9Y448 316 aa7.29□□□□□ -1.24
NEK4-205ENST00000493199 CCDC61Q9Y6R9 512 aa7.29□□□□□ -1.24
NEK4-205ENST00000493199 WASHC2AQ641Q2 1341 aa7.28□□□□□ -1.24
NEK4-205ENST00000493199 MINK1Q8N4C8 1332 aaPredicted RBP7.28□□□□□ -1.24
NEK4-205ENST00000493199 WAPLQ7Z5K2 1190 aa7.28□□□□□ -1.24
NEK4-205ENST00000493199 CDK19Q9BWU1 502 aa7.28□□□□□ -1.24
NEK4-205ENST00000493199 ADGRB1O14514 1584 aa7.28□□□□□ -1.24
NEK4-205ENST00000493199 STRCP1A6NGW2 1772 aa7.28□□□□□ -1.24
NEK4-205ENST00000493199 LRRC7Q96NW7 1537 aa7.27□□□□□ -1.25
NEK4-205ENST00000493199 ANP32CO43423 234 aa7.27□□□□□ -1.25
NEK4-205ENST00000493199 PSME1Q06323 249 aa7.27□□□□□ -1.25
NEK4-205ENST00000493199 NGDNQ8NEJ9 315 aaKnown RBP7.27□□□□□ -1.25
NEK4-205ENST00000493199 CHD2O14647 1828 aaKnown RBP7.27□□□□□ -1.25
NEK4-205ENST00000493199 KNDC1Q76NI1 1749 aa7.27□□□□□ -1.25
NEK4-205ENST00000493199 TESK2Q96S53 571 aa7.26□□□□□ -1.25
NEK4-205ENST00000493199 HIRIP3Q9BW71 556 aaPredicted RBP7.26□□□□□ -1.25
NEK4-205ENST00000493199 DCCP43146 1447 aa7.26□□□□□ -1.25
NEK4-205ENST00000493199 BRD4O60885 1362 aaPredicted RBP7.25□□□□□ -1.25
NEK4-205ENST00000493199 CCDC7Q96M83 1385 aa7.25□□□□□ -1.25
NEK4-205ENST00000493199 DDX10Q13206 875 aaKnown RBP7.25□□□□□ -1.25
NEK4-205ENST00000493199 ESCO1Q5FWF5 840 aa7.25□□□□□ -1.25
NEK4-205ENST00000493199 DIEXFQ68CQ4 756 aaKnown RBP7.25□□□□□ -1.25
NEK4-205ENST00000493199 NUDT16Q96DE0 195 aaKnown RBP7.25□□□□□ -1.25
NEK4-205ENST00000493199 ANKARQ7Z5J8 1434 aa7.25□□□□□ -1.25
NEK4-205ENST00000493199 TMEM94Q12767 1356 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 KTN1Q86UP2 1357 aaKnown RBP7.24□□□□□ -1.25
NEK4-205ENST00000493199 ROBO2Q9HCK4 1378 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 NRXN3Q9Y4C0 1643 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 CABP2Q9NPB3 220 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 ADGRL3Q9HAR2 1447 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 CGNL1Q0VF96 1302 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 KIF7Q2M1P5 1343 aa7.24□□□□□ -1.25
NEK4-205ENST00000493199 QRICH2Q9H0J4 1663 aa7.23□□□□□ -1.25
NEK4-205ENST00000493199 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
NEK4-205ENST00000493199 ARHGEF28Q8N1W1 1705 aaKnown RBP7.23□□□□□ -1.25
NEK4-205ENST00000493199 NPHP3Q7Z494 1330 aa7.23□□□□□ -1.25
NEK4-205ENST00000493199 XIRP1Q702N8 1843 aaKnown RBP7.22□□□□□ -1.25
NEK4-205ENST00000493199 PTPRUQ92729 1446 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 PLEKHG3A1L390 1219 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 RALBP1Q15311 655 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 PANK3Q9H999 370 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 CABP1Q9NZU7 370 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 SLAIN2Q9P270 581 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 RGS17Q9UGC6 210 aaPredicted RBP7.22□□□□□ -1.25
NEK4-205ENST00000493199 PHF8Q9UPP1 1060 aa7.22□□□□□ -1.25
NEK4-205ENST00000493199 SETD1AO15047 1707 aaKnown RBP7.21□□□□□ -1.25
NEK4-205ENST00000493199 XRN1Q8IZH2 1706 aaKnown RBP7.21□□□□□ -1.25
NEK4-205ENST00000493199 TTC21AQ8NDW8 1320 aa7.21□□□□□ -1.26
NEK4-205ENST00000493199 TULP4Q9NRJ4 1543 aa7.21□□□□□ -1.26
NEK4-205ENST00000493199 NSD2O96028 1365 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 ANKRD36BQ8N2N9 1353 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 ADGRB2O60241 1585 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 PPIP5K1Q6PFW1 1433 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 ATP7BP35670 1465 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 NUTM2FA1L443 756 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 PAK3O75914 559 aaPredicted RBP7.2□□□□□ -1.26
NEK4-205ENST00000493199 HAP1P54257 671 aaPredicted RBP7.2□□□□□ -1.26
NEK4-205ENST00000493199 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 COG3Q96JB2 828 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 SLC12A5Q9H2X9 1139 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 ASXL1Q8IXJ9 1541 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 PLEKHH1Q9ULM0 1364 aa7.2□□□□□ -1.26
NEK4-205ENST00000493199 ITSN1Q15811 1721 aa7.19□□□□□ -1.26
NEK4-205ENST00000493199 MORC1Q86VD1 984 aa7.19□□□□□ -1.26
NEK4-205ENST00000493199 KCNH5Q8NCM2 988 aa7.19□□□□□ -1.26
NEK4-205ENST00000493199 LRRC59Q96AG4 307 aaKnown RBP7.19□□□□□ -1.26
NEK4-205ENST00000493199 CFAP53Q96M91 514 aa7.19□□□□□ -1.26
NEK4-205ENST00000493199 ACEP12821 1306 aa7.19□□□□□ -1.26
NEK4-205ENST00000493199 NEFMP07197 916 aa7.18□□□□□ -1.26
NEK4-205ENST00000493199 LMOD2Q6P5Q4 547 aa7.18□□□□□ -1.26
NEK4-205ENST00000493199 ABTB2Q8N961 1025 aa7.18□□□□□ -1.26
NEK4-205ENST00000493199 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
NEK4-205ENST00000493199 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
NEK4-205ENST00000493199 EDC4Q6P2E9 1401 aaKnown RBP7.18□□□□□ -1.26
NEK4-205ENST00000493199 FOXO3O43524 673 aa7.17□□□□□ -1.26
NEK4-205ENST00000493199 KRT28Q7Z3Y7 464 aa7.17□□□□□ -1.26
NEK4-205ENST00000493199 RBM33Q96EV2 1170 aaKnown RBP7.17□□□□□ -1.26
NEK4-205ENST00000493199 PNNQ9H307 717 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms