RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
PDZRN3-210ENST00000492909 MIER1Q8N108 512 aa19.43■□□□□ 0.7
PDZRN3-210ENST00000492909 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
PDZRN3-210ENST00000492909 TULP4Q9NRJ4 1543 aa19.42■□□□□ 0.7
PDZRN3-210ENST00000492909 LTBP4Q8N2S1 1624 aa19.42■□□□□ 0.7
PDZRN3-210ENST00000492909 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
PDZRN3-210ENST00000492909 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-210ENST00000492909 PLEKHH1Q9ULM0 1364 aa19.41■□□□□ 0.7
PDZRN3-210ENST00000492909 CHD2O14647 1828 aaKnown RBP19.41■□□□□ 0.7
PDZRN3-210ENST00000492909 MYOM1P52179 1685 aa19.41■□□□□ 0.7
PDZRN3-210ENST00000492909 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-210ENST00000492909 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
PDZRN3-210ENST00000492909 ROBO2Q9HCK4 1378 aa19.4■□□□□ 0.7
PDZRN3-210ENST00000492909 KCNA6P17658 529 aa19.39■□□□□ 0.7
PDZRN3-210ENST00000492909 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
PDZRN3-210ENST00000492909 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-210ENST00000492909 PUS7Q96PZ0 661 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-210ENST00000492909 ANP32CO43423 234 aa19.38■□□□□ 0.69
PDZRN3-210ENST00000492909 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
PDZRN3-210ENST00000492909 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
PDZRN3-210ENST00000492909 PANK3Q9H999 370 aa19.34■□□□□ 0.69
PDZRN3-210ENST00000492909 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
PDZRN3-210ENST00000492909 CERKQ8TCT0 537 aa19.33■□□□□ 0.68
PDZRN3-210ENST00000492909 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
PDZRN3-210ENST00000492909 ADGRB2O60241 1585 aa19.33■□□□□ 0.68
PDZRN3-210ENST00000492909 LRRC7Q96NW7 1537 aa19.33■□□□□ 0.68
PDZRN3-210ENST00000492909 PROSER2Q86WR7 435 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-210ENST00000492909 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
PDZRN3-210ENST00000492909 ATAD2Q6PL18 1390 aa19.32■□□□□ 0.68
PDZRN3-210ENST00000492909 WASLO00401 505 aaPredicted RBP19.3■□□□□ 0.68
PDZRN3-210ENST00000492909 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
PDZRN3-210ENST00000492909 PER1O15534 1290 aaPredicted RBP19.29■□□□□ 0.68
PDZRN3-210ENST00000492909 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
PDZRN3-210ENST00000492909 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
PDZRN3-210ENST00000492909 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
PDZRN3-210ENST00000492909 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
PDZRN3-210ENST00000492909 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
PDZRN3-210ENST00000492909 SLC12A5Q9H2X9 1139 aa19.27■□□□□ 0.68
PDZRN3-210ENST00000492909 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.67
PDZRN3-210ENST00000492909 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
PDZRN3-210ENST00000492909 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
PDZRN3-210ENST00000492909 C14orf37Q86TY3 774 aa19.24■□□□□ 0.67
PDZRN3-210ENST00000492909 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
PDZRN3-210ENST00000492909 ANKRD36BQ8N2N9 1353 aa19.22■□□□□ 0.67
PDZRN3-210ENST00000492909 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
PDZRN3-210ENST00000492909 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
PDZRN3-210ENST00000492909 CCER2I3L3R5 266 aa19.21■□□□□ 0.67
PDZRN3-210ENST00000492909 ATP7BP35670 1465 aa19.21■□□□□ 0.67
PDZRN3-210ENST00000492909 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-210ENST00000492909 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-210ENST00000492909 CARD14Q9BXL6 1004 aa19.2■□□□□ 0.66
PDZRN3-210ENST00000492909 TERF2IPQ9NYB0 399 aa19.2■□□□□ 0.66
PDZRN3-210ENST00000492909 CABP1Q9NZU7 370 aa19.2■□□□□ 0.66
PDZRN3-210ENST00000492909 CCDC61Q9Y6R9 512 aa19.19■□□□□ 0.66
PDZRN3-210ENST00000492909 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
PDZRN3-210ENST00000492909 TOPAZ1Q8N9V7 1692 aa19.19■□□□□ 0.66
PDZRN3-210ENST00000492909 RALBP1Q15311 655 aa19.19■□□□□ 0.66
PDZRN3-210ENST00000492909 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 ADGRL3Q9HAR2 1447 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 FMN2Q9NZ56 1722 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 USP32Q8NFA0 1604 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 AMER1Q5JTC6 1135 aaPredicted RBP19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 NSD3Q9BZ95 1437 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
PDZRN3-210ENST00000492909 PRR36Q9H6K5 1346 aa19.17■□□□□ 0.66
PDZRN3-210ENST00000492909 IQSEC2Q5JU85 1478 aa19.17■□□□□ 0.66
PDZRN3-210ENST00000492909 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
PDZRN3-210ENST00000492909 UBAP1LF5GYI3 381 aa19.17■□□□□ 0.66
PDZRN3-210ENST00000492909 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
PDZRN3-210ENST00000492909 HDGFL2Q7Z4V5 671 aaPredicted RBP19.16■□□□□ 0.66
PDZRN3-210ENST00000492909 MSH6P52701 1360 aa19.16■□□□□ 0.66
PDZRN3-210ENST00000492909 PARD3Q8TEW0 1356 aa19.16■□□□□ 0.66
PDZRN3-210ENST00000492909 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
PDZRN3-210ENST00000492909 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
PDZRN3-210ENST00000492909 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
PDZRN3-210ENST00000492909 NUTM2FA1L443 756 aa19.14■□□□□ 0.66
PDZRN3-210ENST00000492909 ANKARQ7Z5J8 1434 aa19.14■□□□□ 0.65
PDZRN3-210ENST00000492909 CGNL1Q0VF96 1302 aa19.13■□□□□ 0.65
PDZRN3-210ENST00000492909 AKAP12Q02952 1782 aa19.13■□□□□ 0.65
PDZRN3-210ENST00000492909 CPSF1Q10570 1443 aaKnown RBP19.13■□□□□ 0.65
PDZRN3-210ENST00000492909 PIP4K2BP78356 416 aa19.12■□□□□ 0.65
PDZRN3-210ENST00000492909 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
PDZRN3-210ENST00000492909 MON2Q7Z3U7 1717 aa19.11■□□□□ 0.65
PDZRN3-210ENST00000492909 TOM1O60784 492 aa19.11■□□□□ 0.65
PDZRN3-210ENST00000492909 ATF3P18847 181 aa19.11■□□□□ 0.65
PDZRN3-210ENST00000492909 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
PDZRN3-210ENST00000492909 NSD2O96028 1365 aa19.09■□□□□ 0.65
PDZRN3-210ENST00000492909 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
PDZRN3-210ENST00000492909 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
PDZRN3-210ENST00000492909 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
PDZRN3-210ENST00000492909 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
PDZRN3-210ENST00000492909 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
PDZRN3-210ENST00000492909 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
PDZRN3-210ENST00000492909 ANKRD26Q9UPS8 1709 aa19.07■□□□□ 0.64
PDZRN3-210ENST00000492909 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
PDZRN3-210ENST00000492909 FBXO41Q8TF61 875 aa19.06■□□□□ 0.64
PDZRN3-210ENST00000492909 ACEP12821 1306 aa19.06■□□□□ 0.64
PDZRN3-210ENST00000492909 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms