RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
SGMS1-204ENST00000492601 TECPR2O15040 1411 aa25.48■■□□□ 1.67
SGMS1-204ENST00000492601 PNPLA6Q8IY17 1366 aa25.46■■□□□ 1.67
SGMS1-204ENST00000492601 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
SGMS1-204ENST00000492601 ABCC11Q96J66 1382 aa25.45■■□□□ 1.67
SGMS1-204ENST00000492601 PLEKHH1Q9ULM0 1364 aa25.45■■□□□ 1.67
SGMS1-204ENST00000492601 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
SGMS1-204ENST00000492601 MYOM2P54296 1465 aa25.44■■□□□ 1.66
SGMS1-204ENST00000492601 NRXN1Q9ULB1 1477 aa25.44■■□□□ 1.66
SGMS1-204ENST00000492601 C14orf93Q9H972 538 aaKnown RBP25.43■■□□□ 1.66
SGMS1-204ENST00000492601 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
SGMS1-204ENST00000492601 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
SGMS1-204ENST00000492601 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
SGMS1-204ENST00000492601 RGPD8O14715 1765 aaPredicted RBP25.41■■□□□ 1.66
SGMS1-204ENST00000492601 SOS2Q07890 1332 aaPredicted RBP25.41■■□□□ 1.66
SGMS1-204ENST00000492601 NUTM2FA1L443 756 aa25.41■■□□□ 1.66
SGMS1-204ENST00000492601 AFF2P51816 1311 aa25.39■■□□□ 1.66
SGMS1-204ENST00000492601 C8orf37Q96NL8 207 aa25.38■■□□□ 1.65
SGMS1-204ENST00000492601 DHX57Q6P158 1386 aaKnown RBP25.37■■□□□ 1.65
SGMS1-204ENST00000492601 ADAMTS2O95450 1211 aa25.35■■□□□ 1.65
SGMS1-204ENST00000492601 NPHP3Q7Z494 1330 aa25.35■■□□□ 1.65
SGMS1-204ENST00000492601 COL22A1Q8NFW1 1626 aaPredicted RBP25.34■■□□□ 1.65
SGMS1-204ENST00000492601 XPCQ01831 940 aaPredicted RBP25.34■■□□□ 1.65
SGMS1-204ENST00000492601 PXDNQ92626 1479 aa25.34■■□□□ 1.65
SGMS1-204ENST00000492601 FOXO3O43524 673 aa25.33■■□□□ 1.65
SGMS1-204ENST00000492601 HRCP23327 699 aa25.33■■□□□ 1.65
SGMS1-204ENST00000492601 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
SGMS1-204ENST00000492601 RXRBP28702 533 aa25.32■■□□□ 1.64
SGMS1-204ENST00000492601 SAFB2Q14151 953 aaKnown RBP eCLIP25.32■■□□□ 1.64
SGMS1-204ENST00000492601 SIRT1Q96EB6 747 aa25.32■■□□□ 1.64
SGMS1-204ENST00000492601 KIF1AQ12756 1690 aa25.31■■□□□ 1.64
SGMS1-204ENST00000492601 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
SGMS1-204ENST00000492601 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
SGMS1-204ENST00000492601 PRAM1Q96QH2 718 aa25.3■■□□□ 1.64
SGMS1-204ENST00000492601 MARF1Q9Y4F3 1742 aaKnown RBP25.29■■□□□ 1.64
SGMS1-204ENST00000492601 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
SGMS1-204ENST00000492601 DLC1Q96QB1 1528 aa25.27■■□□□ 1.64
SGMS1-204ENST00000492601 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
SGMS1-204ENST00000492601 POGKQ9P215 609 aa25.26■■□□□ 1.63
SGMS1-204ENST00000492601 TRAK1Q9UPV9 953 aa25.24■■□□□ 1.63
SGMS1-204ENST00000492601 CDK12Q9NYV4 1490 aaPredicted RBP25.23■■□□□ 1.63
SGMS1-204ENST00000492601 USP32Q8NFA0 1604 aa25.22■■□□□ 1.63
SGMS1-204ENST00000492601 PHF8Q9UPP1 1060 aa25.21■■□□□ 1.63
SGMS1-204ENST00000492601 ADGRB2O60241 1585 aa25.2■■□□□ 1.62
SGMS1-204ENST00000492601 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
SGMS1-204ENST00000492601 KRT28Q7Z3Y7 464 aa25.2■■□□□ 1.62
SGMS1-204ENST00000492601 USP21Q9UK80 565 aa25.2■■□□□ 1.62
SGMS1-204ENST00000492601 HIRIP3Q9BW71 556 aaPredicted RBP25.19■■□□□ 1.62
SGMS1-204ENST00000492601 ARHGEF28Q8N1W1 1705 aaKnown RBP25.18■■□□□ 1.62
SGMS1-204ENST00000492601 RGS12O14924 1447 aa25.18■■□□□ 1.62
SGMS1-204ENST00000492601 SPATA31A3Q5VYP0 1347 aa25.17■■□□□ 1.62
SGMS1-204ENST00000492601 MINK1Q8N4C8 1332 aaPredicted RBP25.17■■□□□ 1.62
SGMS1-204ENST00000492601 STAC3Q96MF2 364 aa25.17■■□□□ 1.62
SGMS1-204ENST00000492601 FNBP4Q8N3X1 1017 aaPredicted RBP25.16■■□□□ 1.62
SGMS1-204ENST00000492601 UPF1Q92900 1129 aaKnown RBP eCLIP25.16■■□□□ 1.62
SGMS1-204ENST00000492601 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
SGMS1-204ENST00000492601 TRPC5Q9UL62 973 aaPredicted RBP25.13■■□□□ 1.61
SGMS1-204ENST00000492601 ANKARQ7Z5J8 1434 aa25.12■■□□□ 1.61
SGMS1-204ENST00000492601 PLEKHG5O94827 1062 aa25.12■■□□□ 1.61
SGMS1-204ENST00000492601 PSME1Q06323 249 aa25.12■■□□□ 1.61
SGMS1-204ENST00000492601 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
SGMS1-204ENST00000492601 ABCA3Q99758 1704 aa25.11■■□□□ 1.61
SGMS1-204ENST00000492601 ATRNO75882 1429 aa25.11■■□□□ 1.61
SGMS1-204ENST00000492601 KIAA1210Q9ULL0 1709 aa25.1■■□□□ 1.61
SGMS1-204ENST00000492601 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
SGMS1-204ENST00000492601 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
SGMS1-204ENST00000492601 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.09■■□□□ 1.61
SGMS1-204ENST00000492601 TULP4Q9NRJ4 1543 aa25.08■■□□□ 1.61
SGMS1-204ENST00000492601 TRPM3Q9HCF6 1732 aaPredicted RBP25.08■■□□□ 1.61
SGMS1-204ENST00000492601 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.6
SGMS1-204ENST00000492601 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
SGMS1-204ENST00000492601 WASLO00401 505 aaPredicted RBP25.07■■□□□ 1.6
SGMS1-204ENST00000492601 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
SGMS1-204ENST00000492601 EIF3AQ14152 1382 aaKnown RBP25.06■■□□□ 1.6
SGMS1-204ENST00000492601 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
SGMS1-204ENST00000492601 HAP1P54257 671 aaPredicted RBP25.06■■□□□ 1.6
SGMS1-204ENST00000492601 PLCH1Q4KWH8 1693 aa25.04■■□□□ 1.6
SGMS1-204ENST00000492601 ALS2Q96Q42 1657 aa25.03■■□□□ 1.6
SGMS1-204ENST00000492601 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
SGMS1-204ENST00000492601 SLIT2O94813 1529 aa25.02■■□□□ 1.6
SGMS1-204ENST00000492601 NBPF1Q3BBV0 1214 aa25■■□□□ 1.59
SGMS1-204ENST00000492601 UNC5CLQ8IV45 518 aa25■■□□□ 1.59
SGMS1-204ENST00000492601 GPRASP1Q5JY77 1395 aa25■■□□□ 1.59
SGMS1-204ENST00000492601 NGDNQ8NEJ9 315 aaKnown RBP24.99■■□□□ 1.59
SGMS1-204ENST00000492601 GJD4Q96KN9 370 aaPredicted RBP24.99■■□□□ 1.59
SGMS1-204ENST00000492601 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
SGMS1-204ENST00000492601 ATP7BP35670 1465 aa24.98■■□□□ 1.59
SGMS1-204ENST00000492601 EP400Q96L91 3159 aa24.97■■□□□ 1.59
SGMS1-204ENST00000492601 GLI3P10071 1580 aa24.97■■□□□ 1.59
SGMS1-204ENST00000492601 NUDT16Q96DE0 195 aaKnown RBP24.97■■□□□ 1.59
SGMS1-204ENST00000492601 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
SGMS1-204ENST00000492601 BRWD3Q6RI45 1802 aa24.96■■□□□ 1.59
SGMS1-204ENST00000492601 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
SGMS1-204ENST00000492601 TOPAZ1Q8N9V7 1692 aa24.95■■□□□ 1.58
SGMS1-204ENST00000492601 CDK19Q9BWU1 502 aa24.95■■□□□ 1.58
SGMS1-204ENST00000492601 CRYBG1Q9Y4K1 1723 aa24.95■■□□□ 1.58
SGMS1-204ENST00000492601 PAK3O75914 559 aaPredicted RBP24.94■■□□□ 1.58
SGMS1-204ENST00000492601 SIN3AQ96ST3 1273 aa24.94■■□□□ 1.58
SGMS1-204ENST00000492601 QRICH2Q9H0J4 1663 aa24.92■■□□□ 1.58
SGMS1-204ENST00000492601 L3MBTL2Q969R5 705 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms