RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 POLR3AO14802 1390 aaPredicted RBP38.21■■■■□ 3.71
CHKB-212ENST00000492582 STAG3Q9UJ98 1225 aa38.21■■■■□ 3.71
CHKB-212ENST00000492582 YTHDC2Q9H6S0 1430 aaKnown RBP38.2■■■■□ 3.71
CHKB-212ENST00000492582 ZNF521Q96K83 1311 aa38.2■■■■□ 3.71
CHKB-212ENST00000492582 ANKRD36BQ8N2N9 1353 aa38.2■■■■□ 3.71
CHKB-212ENST00000492582 SENP3Q9H4L4 574 aaPredicted RBP38.19■■■■□ 3.7
CHKB-212ENST00000492582 A2ML1A8K2U0 1454 aa38.19■■■■□ 3.7
CHKB-212ENST00000492582 MORC1Q86VD1 984 aa38.18■■■■□ 3.7
CHKB-212ENST00000492582 SAFB2Q14151 953 aaKnown RBP eCLIP38.17■■■■□ 3.7
CHKB-212ENST00000492582 MLECQ14165 292 aa38.17■■■■□ 3.7
CHKB-212ENST00000492582 CABP2Q9NPB3 220 aa38.16■■■■□ 3.7
CHKB-212ENST00000492582 CCDC136Q96JN2 1154 aa38.16■■■■□ 3.7
CHKB-212ENST00000492582 CGNL1Q0VF96 1302 aa38.15■■■■□ 3.7
CHKB-212ENST00000492582 NINLQ9Y2I6 1382 aa38.12■■■■□ 3.69
CHKB-212ENST00000492582 CCDC146Q8IYE0 955 aa38.12■■■■□ 3.69
CHKB-212ENST00000492582 PRAM1Q96QH2 718 aa38.1■■■■□ 3.69
CHKB-212ENST00000492582 NSD2O96028 1365 aa38.09■■■■□ 3.69
CHKB-212ENST00000492582 SHPRHQ149N8 1683 aa38.09■■■■□ 3.69
CHKB-212ENST00000492582 RIMS2Q9UQ26 1411 aa38.09■■■■□ 3.69
CHKB-212ENST00000492582 GOLGA2Q08379 1002 aa38.08■■■■□ 3.69
CHKB-212ENST00000492582 DUSP27Q5VZP5 1158 aa38.07■■■■□ 3.69
CHKB-212ENST00000492582 EXOC6Q8TAG9 804 aa38.05■■■■□ 3.68
CHKB-212ENST00000492582 POGKQ9P215 609 aa38.05■■■■□ 3.68
CHKB-212ENST00000492582 ATAD2Q6PL18 1390 aa38.05■■■■□ 3.68
CHKB-212ENST00000492582 APAF1O14727 1248 aa38.05■■■■□ 3.68
CHKB-212ENST00000492582 SRPK2P78362 688 aaKnown RBP38.05■■■■□ 3.68
CHKB-212ENST00000492582 MINK1Q8N4C8 1332 aaPredicted RBP38.04■■■■□ 3.68
CHKB-212ENST00000492582 SETD1AO15047 1707 aaKnown RBP38.04■■■■□ 3.68
CHKB-212ENST00000492582 TNNT2P45379 298 aaPredicted RBP38.03■■■■□ 3.68
CHKB-212ENST00000492582 A0A1W2PP64 1363 aa38.02■■■■□ 3.68
CHKB-212ENST00000492582 ZMYM3Q14202 1370 aa38.02■■■■□ 3.68
CHKB-212ENST00000492582 DLC1Q96QB1 1528 aa38.01■■■■□ 3.67
CHKB-212ENST00000492582 SLFN5Q08AF3 891 aa38■■■■□ 3.67
CHKB-212ENST00000492582 ABCC11Q96J66 1382 aa37.99■■■■□ 3.67
CHKB-212ENST00000492582 NGEFQ8N5V2 710 aa37.99■■■■□ 3.67
CHKB-212ENST00000492582 ESF1Q9H501 851 aaKnown RBP37.98■■■■□ 3.67
CHKB-212ENST00000492582 TRMT2AQ8IZ69 625 aaKnown RBP37.96■■■■□ 3.67
CHKB-212ENST00000492582 MTHFSP49914 203 aa37.95■■■■□ 3.67
CHKB-212ENST00000492582 PLIN1O60240 522 aa37.94■■■■□ 3.66
CHKB-212ENST00000492582 CD163L1Q9NR16 1453 aa37.93■■■■□ 3.66
CHKB-212ENST00000492582 NRXN3Q9Y4C0 1643 aa37.93■■■■□ 3.66
CHKB-212ENST00000492582 CFAP53Q96M91 514 aa37.91■■■■□ 3.66
CHKB-212ENST00000492582 TERF2IPQ9NYB0 399 aa37.9■■■■□ 3.66
CHKB-212ENST00000492582 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.89■■■■□ 3.66
CHKB-212ENST00000492582 CDK19Q9BWU1 502 aa37.89■■■■□ 3.66
CHKB-212ENST00000492582 SPINK5Q9NQ38 1064 aaPredicted RBP37.88■■■■□ 3.65
CHKB-212ENST00000492582 ANKRD26Q9UPS8 1709 aa37.86■■■■□ 3.65
CHKB-212ENST00000492582 IQSEC2Q5JU85 1478 aa37.86■■■■□ 3.65
CHKB-212ENST00000492582 E9PSI1 815 aa37.85■■■■□ 3.65
CHKB-212ENST00000492582 TNRQ92752 1358 aa37.85■■■■□ 3.65
CHKB-212ENST00000492582 MED14O60244 1454 aa37.85■■■■□ 3.65
CHKB-212ENST00000492582 RUNDC1Q96C34 613 aa37.84■■■■□ 3.65
CHKB-212ENST00000492582 NKTRP30414 1462 aaKnown RBP37.84■■■■□ 3.65
CHKB-212ENST00000492582 NLRP1Q9C000 1473 aa37.83■■■■□ 3.65
CHKB-212ENST00000492582 CRBNQ96SW2 442 aa37.83■■■■□ 3.65
CHKB-212ENST00000492582 WAPLQ7Z5K2 1190 aa37.81■■■■□ 3.64
CHKB-212ENST00000492582 GGNBP2Q9H3C7 697 aa37.8■■■■□ 3.64
CHKB-212ENST00000492582 DMRT2Q9Y5R5 561 aa37.8■■■■□ 3.64
CHKB-212ENST00000492582 HDGFL2Q7Z4V5 671 aaPredicted RBP37.8■■■■□ 3.64
CHKB-212ENST00000492582 WWC1Q8IX03 1113 aa37.79■■■■□ 3.64
CHKB-212ENST00000492582 FANCIQ9NVI1 1328 aa37.78■■■■□ 3.64
CHKB-212ENST00000492582 FYB1O15117 783 aa37.78■■■■□ 3.64
CHKB-212ENST00000492582 METP08581 1390 aa37.78■■■■□ 3.64
CHKB-212ENST00000492582 C20orf194Q5TEA3 1177 aa37.76■■■■□ 3.64
CHKB-212ENST00000492582 CABP1Q9NZU7 370 aa37.76■■■■□ 3.64
CHKB-212ENST00000492582 UBR1Q8IWV7 1749 aa37.76■■■■□ 3.64
CHKB-212ENST00000492582 HDGFP51858 240 aaKnown RBP37.75■■■■□ 3.63
CHKB-212ENST00000492582 KNDC1Q76NI1 1749 aa37.75■■■■□ 3.63
CHKB-212ENST00000492582 TCP11L2Q8N4U5 519 aa37.74■■■■□ 3.63
CHKB-212ENST00000492582 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.73■■■■□ 3.63
CHKB-212ENST00000492582 KIF20BQ96Q89 1820 aa37.73■■■■□ 3.63
CHKB-212ENST00000492582 ATP7BP35670 1465 aa37.73■■■■□ 3.63
CHKB-212ENST00000492582 PHF23Q9BUL5 403 aaPredicted RBP37.72■■■■□ 3.63
CHKB-212ENST00000492582 COL3A1P02461 1466 aaPredicted RBP37.71■■■■□ 3.63
CHKB-212ENST00000492582 TMEM2Q9UHN6 1383 aa37.71■■■■□ 3.63
CHKB-212ENST00000492582 TECPR2O15040 1411 aa37.69■■■■□ 3.62
CHKB-212ENST00000492582 RRP7AQ9Y3A4 280 aaKnown RBP37.68■■■■□ 3.62
CHKB-212ENST00000492582 FAM135BQ49AJ0 1406 aa37.67■■■■□ 3.62
CHKB-212ENST00000492582 ADGRB2O60241 1585 aa37.67■■■■□ 3.62
CHKB-212ENST00000492582 U2AF1L5P0DN76 240 aaPredicted RBP37.67■■■■□ 3.62
CHKB-212ENST00000492582 U2AF1Q01081 240 aaKnown RBP eCLIP37.67■■■■□ 3.62
CHKB-212ENST00000492582 CPS1P31327 1500 aa37.66■■■■□ 3.62
CHKB-212ENST00000492582 NEUROD2Q15784 382 aa37.65■■■■□ 3.62
CHKB-212ENST00000492582 CCDC27Q2M243 656 aa37.65■■■■□ 3.62
CHKB-212ENST00000492582 NCBP3Q53F19 620 aaKnown RBP37.65■■■■□ 3.62
CHKB-212ENST00000492582 SIRT1Q96EB6 747 aa37.65■■■■□ 3.62
CHKB-212ENST00000492582 WASLO00401 505 aaPredicted RBP37.64■■■■□ 3.62
CHKB-212ENST00000492582 TXNDC2Q86VQ3 553 aa37.63■■■■□ 3.61
CHKB-212ENST00000492582 WDR63Q8IWG1 891 aa37.62■■■■□ 3.61
CHKB-212ENST00000492582 BCAR3O75815 825 aa37.58■■■■□ 3.61
CHKB-212ENST00000492582 CPSF1Q10570 1443 aaKnown RBP37.58■■■■□ 3.61
CHKB-212ENST00000492582 PPIP5K1Q6PFW1 1433 aa37.57■■■■□ 3.61
CHKB-212ENST00000492582 ADAMTS13Q76LX8 1427 aa37.57■■■■□ 3.6
CHKB-212ENST00000492582 PNPLA6Q8IY17 1366 aa37.56■■■■□ 3.6
CHKB-212ENST00000492582 U2SURPO15042 1029 aaKnown RBP37.54■■■■□ 3.6
CHKB-212ENST00000492582 TCERG1O14776 1098 aaKnown RBP37.53■■■■□ 3.6
CHKB-212ENST00000492582 MSH5O43196 834 aa37.53■■■■□ 3.6
CHKB-212ENST00000492582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.53■■■■□ 3.6
CHKB-212ENST00000492582 PLEKHF1Q96S99 279 aa37.53■■■■□ 3.6
CHKB-212ENST00000492582 EDC4Q6P2E9 1401 aaKnown RBP37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms