RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
CDK9-204ENST00000491521 NUTM2FA1L443 756 aa19.83■□□□□ 0.77
CDK9-204ENST00000491521 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.77
CDK9-204ENST00000491521 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.76
CDK9-204ENST00000491521 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
CDK9-204ENST00000491521 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
CDK9-204ENST00000491521 KNDC1Q76NI1 1749 aa19.82■□□□□ 0.76
CDK9-204ENST00000491521 MYOM2P54296 1465 aa19.81■□□□□ 0.76
CDK9-204ENST00000491521 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
CDK9-204ENST00000491521 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
CDK9-204ENST00000491521 CDC42BPGQ6DT37 1551 aa19.8■□□□□ 0.76
CDK9-204ENST00000491521 TECPR2O15040 1411 aa19.8■□□□□ 0.76
CDK9-204ENST00000491521 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
CDK9-204ENST00000491521 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
CDK9-204ENST00000491521 ABCC11Q96J66 1382 aa19.8■□□□□ 0.76
CDK9-204ENST00000491521 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
CDK9-204ENST00000491521 LAMC1P11047 1609 aa19.78■□□□□ 0.76
CDK9-204ENST00000491521 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
CDK9-204ENST00000491521 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
CDK9-204ENST00000491521 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
CDK9-204ENST00000491521 XPCQ01831 940 aaPredicted RBP19.75■□□□□ 0.75
CDK9-204ENST00000491521 PRAM1Q96QH2 718 aa19.74■□□□□ 0.75
CDK9-204ENST00000491521 ADAMTS2O95450 1211 aa19.73■□□□□ 0.75
CDK9-204ENST00000491521 ZNF772Q68DY9 489 aaPredicted RBP19.73■□□□□ 0.75
CDK9-204ENST00000491521 C8orf37Q96NL8 207 aa19.73■□□□□ 0.75
CDK9-204ENST00000491521 FOXO3O43524 673 aa19.72■□□□□ 0.75
CDK9-204ENST00000491521 FMN2Q9NZ56 1722 aa19.72■□□□□ 0.75
CDK9-204ENST00000491521 POGKQ9P215 609 aa19.72■□□□□ 0.75
CDK9-204ENST00000491521 AFF2P51816 1311 aa19.72■□□□□ 0.75
CDK9-204ENST00000491521 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
CDK9-204ENST00000491521 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
CDK9-204ENST00000491521 NPHP3Q7Z494 1330 aa19.71■□□□□ 0.75
CDK9-204ENST00000491521 RGPD8O14715 1765 aaPredicted RBP19.69■□□□□ 0.74
CDK9-204ENST00000491521 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
CDK9-204ENST00000491521 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
CDK9-204ENST00000491521 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
CDK9-204ENST00000491521 PXDNQ92626 1479 aa19.67■□□□□ 0.74
CDK9-204ENST00000491521 NGLY1Q96IV0 654 aa19.66■□□□□ 0.74
CDK9-204ENST00000491521 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
CDK9-204ENST00000491521 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
CDK9-204ENST00000491521 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
CDK9-204ENST00000491521 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
CDK9-204ENST00000491521 PLEKHG5O94827 1062 aa19.64■□□□□ 0.73
CDK9-204ENST00000491521 RXRBP28702 533 aa19.64■□□□□ 0.73
CDK9-204ENST00000491521 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
CDK9-204ENST00000491521 SIN3AQ96ST3 1273 aa19.63■□□□□ 0.73
CDK9-204ENST00000491521 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
CDK9-204ENST00000491521 COL22A1Q8NFW1 1626 aaPredicted RBP19.62■□□□□ 0.73
CDK9-204ENST00000491521 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
CDK9-204ENST00000491521 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
CDK9-204ENST00000491521 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
CDK9-204ENST00000491521 QTRT2Q9H974 415 aaKnown RBP19.6■□□□□ 0.73
CDK9-204ENST00000491521 LMOD2Q6P5Q4 547 aa19.58■□□□□ 0.72
CDK9-204ENST00000491521 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
CDK9-204ENST00000491521 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
CDK9-204ENST00000491521 ARHGEF28Q8N1W1 1705 aaKnown RBP19.57■□□□□ 0.72
CDK9-204ENST00000491521 PSME1Q06323 249 aa19.57■□□□□ 0.72
CDK9-204ENST00000491521 USP21Q9UK80 565 aa19.57■□□□□ 0.72
CDK9-204ENST00000491521 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
CDK9-204ENST00000491521 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
CDK9-204ENST00000491521 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
CDK9-204ENST00000491521 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
CDK9-204ENST00000491521 RBM6P78332 1123 aaKnown RBP19.54■□□□□ 0.72
CDK9-204ENST00000491521 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
CDK9-204ENST00000491521 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
CDK9-204ENST00000491521 NBPF1Q3BBV0 1214 aa19.53■□□□□ 0.72
CDK9-204ENST00000491521 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
CDK9-204ENST00000491521 CABLES1Q8TDN4 633 aa19.52■□□□□ 0.72
CDK9-204ENST00000491521 RGS12O14924 1447 aa19.51■□□□□ 0.71
CDK9-204ENST00000491521 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
CDK9-204ENST00000491521 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
CDK9-204ENST00000491521 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
CDK9-204ENST00000491521 TRPC5Q9UL62 973 aaPredicted RBP19.51■□□□□ 0.71
CDK9-204ENST00000491521 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
CDK9-204ENST00000491521 FNBP4Q8N3X1 1017 aaPredicted RBP19.5■□□□□ 0.71
CDK9-204ENST00000491521 CDK12Q9NYV4 1490 aaPredicted RBP19.49■□□□□ 0.71
CDK9-204ENST00000491521 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
CDK9-204ENST00000491521 L3MBTL2Q969R5 705 aa19.49■□□□□ 0.71
CDK9-204ENST00000491521 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
CDK9-204ENST00000491521 GPRASP1Q5JY77 1395 aa19.47■□□□□ 0.71
CDK9-204ENST00000491521 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
CDK9-204ENST00000491521 ARHGEF10O15013 1369 aa19.46■□□□□ 0.71
CDK9-204ENST00000491521 ATRNO75882 1429 aa19.46■□□□□ 0.71
CDK9-204ENST00000491521 PAK3O75914 559 aaPredicted RBP19.46■□□□□ 0.71
CDK9-204ENST00000491521 UPF1Q92900 1129 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDK9-204ENST00000491521 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
CDK9-204ENST00000491521 CDK19Q9BWU1 502 aa19.46■□□□□ 0.71
CDK9-204ENST00000491521 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
CDK9-204ENST00000491521 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
CDK9-204ENST00000491521 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
CDK9-204ENST00000491521 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
CDK9-204ENST00000491521 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
CDK9-204ENST00000491521 ATP7BP35670 1465 aa19.43■□□□□ 0.7
CDK9-204ENST00000491521 UNC5CLQ8IV45 518 aa19.41■□□□□ 0.7
CDK9-204ENST00000491521 CENPJQ9HC77 1338 aaPredicted RBP19.41■□□□□ 0.7
CDK9-204ENST00000491521 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
CDK9-204ENST00000491521 ALS2Q96Q42 1657 aa19.4■□□□□ 0.7
CDK9-204ENST00000491521 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
CDK9-204ENST00000491521 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
CDK9-204ENST00000491521 CCDC9Q9Y3X0 531 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms