RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 C8orf37Q96NL8 207 aa23.35■■□□□ 1.33
NUP58-213ENST00000490231 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
NUP58-213ENST00000490231 IFT172Q9UG01 1749 aa23.33■■□□□ 1.32
NUP58-213ENST00000490231 PIK3C2GO75747 1445 aa23.33■■□□□ 1.32
NUP58-213ENST00000490231 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
NUP58-213ENST00000490231 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
NUP58-213ENST00000490231 ESCO1Q5FWF5 840 aa23.3■■□□□ 1.32
NUP58-213ENST00000490231 QTRT2Q9H974 415 aaKnown RBP23.3■■□□□ 1.32
NUP58-213ENST00000490231 STK26Q9P289 416 aa23.3■■□□□ 1.32
NUP58-213ENST00000490231 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
NUP58-213ENST00000490231 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
NUP58-213ENST00000490231 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
NUP58-213ENST00000490231 RBM6P78332 1123 aaKnown RBP23.28■■□□□ 1.32
NUP58-213ENST00000490231 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
NUP58-213ENST00000490231 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
NUP58-213ENST00000490231 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
NUP58-213ENST00000490231 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
NUP58-213ENST00000490231 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
NUP58-213ENST00000490231 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
NUP58-213ENST00000490231 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
NUP58-213ENST00000490231 RGS12O14924 1447 aa23.25■■□□□ 1.31
NUP58-213ENST00000490231 PXDNQ92626 1479 aa23.24■■□□□ 1.31
NUP58-213ENST00000490231 FOXO3O43524 673 aa23.23■■□□□ 1.31
NUP58-213ENST00000490231 C14orf93Q9H972 538 aaKnown RBP23.23■■□□□ 1.31
NUP58-213ENST00000490231 MYOM2P54296 1465 aa23.23■■□□□ 1.31
NUP58-213ENST00000490231 NRXN1Q9ULB1 1477 aa23.23■■□□□ 1.31
NUP58-213ENST00000490231 FNBP4Q8N3X1 1017 aaPredicted RBP23.22■■□□□ 1.31
NUP58-213ENST00000490231 USP21Q9UK80 565 aa23.21■■□□□ 1.31
NUP58-213ENST00000490231 NUTM2FA1L443 756 aa23.2■■□□□ 1.3
NUP58-213ENST00000490231 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
NUP58-213ENST00000490231 RAB3GAP2Q9H2M9 1393 aa23.18■■□□□ 1.3
NUP58-213ENST00000490231 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
NUP58-213ENST00000490231 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
NUP58-213ENST00000490231 FMN2Q9NZ56 1722 aa23.17■■□□□ 1.3
NUP58-213ENST00000490231 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
NUP58-213ENST00000490231 ATRNO75882 1429 aa23.15■■□□□ 1.3
NUP58-213ENST00000490231 KIF1AQ12756 1690 aa23.14■■□□□ 1.29
NUP58-213ENST00000490231 SPATA31A3Q5VYP0 1347 aa23.12■■□□□ 1.29
NUP58-213ENST00000490231 BCL9LQ86UU0 1499 aa23.11■■□□□ 1.29
NUP58-213ENST00000490231 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
NUP58-213ENST00000490231 KRT28Q7Z3Y7 464 aa23.1■■□□□ 1.29
NUP58-213ENST00000490231 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
NUP58-213ENST00000490231 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
NUP58-213ENST00000490231 ATAD2Q6PL18 1390 aa23.09■■□□□ 1.29
NUP58-213ENST00000490231 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.28
NUP58-213ENST00000490231 PSME1Q06323 249 aa23.06■■□□□ 1.28
NUP58-213ENST00000490231 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
NUP58-213ENST00000490231 HRCP23327 699 aa23.05■■□□□ 1.28
NUP58-213ENST00000490231 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
NUP58-213ENST00000490231 POGKQ9P215 609 aa23.05■■□□□ 1.28
NUP58-213ENST00000490231 TNS3Q68CZ2 1445 aa23.05■■□□□ 1.28
NUP58-213ENST00000490231 SLIT2O94813 1529 aa23.04■■□□□ 1.28
NUP58-213ENST00000490231 GJD4Q96KN9 370 aaPredicted RBP23.04■■□□□ 1.28
NUP58-213ENST00000490231 STAC3Q96MF2 364 aa23.04■■□□□ 1.28
NUP58-213ENST00000490231 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
NUP58-213ENST00000490231 SBNO1A3KN83 1393 aa23.03■■□□□ 1.28
NUP58-213ENST00000490231 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
NUP58-213ENST00000490231 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
NUP58-213ENST00000490231 USP32Q8NFA0 1604 aa23.01■■□□□ 1.27
NUP58-213ENST00000490231 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.01■■□□□ 1.27
NUP58-213ENST00000490231 DCAF11Q8TEB1 546 aa23■■□□□ 1.27
NUP58-213ENST00000490231 TRAK1Q9UPV9 953 aa23■■□□□ 1.27
NUP58-213ENST00000490231 ARHGEF10O15013 1369 aa23■■□□□ 1.27
NUP58-213ENST00000490231 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
NUP58-213ENST00000490231 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
NUP58-213ENST00000490231 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
NUP58-213ENST00000490231 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
NUP58-213ENST00000490231 RALGAPBQ86X10 1494 aa22.97■■□□□ 1.27
NUP58-213ENST00000490231 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
NUP58-213ENST00000490231 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
NUP58-213ENST00000490231 GLI3P10071 1580 aa22.95■■□□□ 1.26
NUP58-213ENST00000490231 CCDC125Q86Z20 511 aa22.95■■□□□ 1.26
NUP58-213ENST00000490231 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
NUP58-213ENST00000490231 LMOD2Q6P5Q4 547 aa22.94■■□□□ 1.26
NUP58-213ENST00000490231 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
NUP58-213ENST00000490231 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
NUP58-213ENST00000490231 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
NUP58-213ENST00000490231 VPS72Q15906 364 aa22.92■■□□□ 1.26
NUP58-213ENST00000490231 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
NUP58-213ENST00000490231 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
NUP58-213ENST00000490231 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
NUP58-213ENST00000490231 TRPM3Q9HCF6 1732 aaPredicted RBP22.88■■□□□ 1.25
NUP58-213ENST00000490231 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
NUP58-213ENST00000490231 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
NUP58-213ENST00000490231 PLCH1Q4KWH8 1693 aa22.87■■□□□ 1.25
NUP58-213ENST00000490231 FAM83GA6ND36 823 aa22.87■■□□□ 1.25
NUP58-213ENST00000490231 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
NUP58-213ENST00000490231 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
NUP58-213ENST00000490231 EP400Q96L91 3159 aa22.85■■□□□ 1.25
NUP58-213ENST00000490231 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
NUP58-213ENST00000490231 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
NUP58-213ENST00000490231 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
NUP58-213ENST00000490231 ARHGEF28Q8N1W1 1705 aaKnown RBP22.83■■□□□ 1.25
NUP58-213ENST00000490231 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.25
NUP58-213ENST00000490231 CCDC9Q9Y3X0 531 aaKnown RBP22.83■■□□□ 1.25
NUP58-213ENST00000490231 ATP7BP35670 1465 aa22.82■■□□□ 1.24
NUP58-213ENST00000490231 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
NUP58-213ENST00000490231 BTG4Q9NY30 223 aa22.8■■□□□ 1.24
NUP58-213ENST00000490231 COL14A1Q05707 1796 aaKnown RBP22.78■■□□□ 1.24
NUP58-213ENST00000490231 PAK3O75914 559 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms