RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
BRD9-208ENST00000489816 MS4A1P11836 297 aa20.4■□□□□ 0.86
BRD9-208ENST00000489816 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
BRD9-208ENST00000489816 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
BRD9-208ENST00000489816 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
BRD9-208ENST00000489816 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
BRD9-208ENST00000489816 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
BRD9-208ENST00000489816 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
BRD9-208ENST00000489816 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
BRD9-208ENST00000489816 NPC1L1Q9UHC9 1359 aa20.38■□□□□ 0.85
BRD9-208ENST00000489816 MYOM2P54296 1465 aa20.38■□□□□ 0.85
BRD9-208ENST00000489816 SLC24A1O60721 1099 aa20.38■□□□□ 0.85
BRD9-208ENST00000489816 INSRP06213 1382 aa20.38■□□□□ 0.85
BRD9-208ENST00000489816 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
BRD9-208ENST00000489816 POGKQ9P215 609 aa20.37■□□□□ 0.85
BRD9-208ENST00000489816 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
BRD9-208ENST00000489816 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
BRD9-208ENST00000489816 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
BRD9-208ENST00000489816 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
BRD9-208ENST00000489816 PRAM1Q96QH2 718 aa20.36■□□□□ 0.85
BRD9-208ENST00000489816 NEFMP07197 916 aa20.34■□□□□ 0.85
BRD9-208ENST00000489816 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
BRD9-208ENST00000489816 CFAP53Q96M91 514 aa20.34■□□□□ 0.85
BRD9-208ENST00000489816 FRMPD1Q5SYB0 1578 aa20.33■□□□□ 0.85
BRD9-208ENST00000489816 RLBP1P12271 317 aa20.33■□□□□ 0.85
BRD9-208ENST00000489816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
BRD9-208ENST00000489816 POLR3AO14802 1390 aaPredicted RBP20.31■□□□□ 0.84
BRD9-208ENST00000489816 ADGRB3O60242 1522 aa20.31■□□□□ 0.84
BRD9-208ENST00000489816 C8orf34Q49A92 452 aa20.3■□□□□ 0.84
BRD9-208ENST00000489816 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
BRD9-208ENST00000489816 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
BRD9-208ENST00000489816 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
BRD9-208ENST00000489816 FAM69CQ0P6D2 419 aa20.28■□□□□ 0.84
BRD9-208ENST00000489816 FAM161AQ3B820 660 aa20.28■□□□□ 0.84
BRD9-208ENST00000489816 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
BRD9-208ENST00000489816 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
BRD9-208ENST00000489816 ABCC3O15438 1527 aa20.28■□□□□ 0.84
BRD9-208ENST00000489816 SBNO2Q9Y2G9 1366 aa20.27■□□□□ 0.84
BRD9-208ENST00000489816 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.84
BRD9-208ENST00000489816 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.84
BRD9-208ENST00000489816 CABP1Q9NZU7 370 aa20.27■□□□□ 0.84
BRD9-208ENST00000489816 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
BRD9-208ENST00000489816 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
BRD9-208ENST00000489816 A0A1W2PP64 1363 aa20.25■□□□□ 0.83
BRD9-208ENST00000489816 SEC24BO95487 1268 aa20.24■□□□□ 0.83
BRD9-208ENST00000489816 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
BRD9-208ENST00000489816 QRICH2Q9H0J4 1663 aa20.24■□□□□ 0.83
BRD9-208ENST00000489816 FYB1O15117 783 aa20.24■□□□□ 0.83
BRD9-208ENST00000489816 IFT172Q9UG01 1749 aa20.23■□□□□ 0.83
BRD9-208ENST00000489816 LMTK2Q8IWU2 1503 aa20.23■□□□□ 0.83
BRD9-208ENST00000489816 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
BRD9-208ENST00000489816 CDK19Q9BWU1 502 aa20.22■□□□□ 0.83
BRD9-208ENST00000489816 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
BRD9-208ENST00000489816 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
BRD9-208ENST00000489816 PDE3AQ14432 1141 aa20.21■□□□□ 0.83
BRD9-208ENST00000489816 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
BRD9-208ENST00000489816 SLC52A1Q9NWF4 448 aa20.21■□□□□ 0.83
BRD9-208ENST00000489816 PPLO60437 1756 aa20.2■□□□□ 0.82
BRD9-208ENST00000489816 TULP4Q9NRJ4 1543 aa20.2■□□□□ 0.82
BRD9-208ENST00000489816 NCKAP5LQ9HCH0 1330 aa20.19■□□□□ 0.82
BRD9-208ENST00000489816 HMOX1P09601 288 aa20.19■□□□□ 0.82
BRD9-208ENST00000489816 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
BRD9-208ENST00000489816 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
BRD9-208ENST00000489816 GLI2P10070 1586 aa20.18■□□□□ 0.82
BRD9-208ENST00000489816 FTSJ3Q8IY81 847 aaKnown RBP20.18■□□□□ 0.82
BRD9-208ENST00000489816 NUTM2FA1L443 756 aa20.18■□□□□ 0.82
BRD9-208ENST00000489816 THUMPD2Q9BTF0 503 aaKnown RBP20.18■□□□□ 0.82
BRD9-208ENST00000489816 RIPK4P57078 832 aa20.18■□□□□ 0.82
BRD9-208ENST00000489816 TERF2IPQ9NYB0 399 aa20.18■□□□□ 0.82
BRD9-208ENST00000489816 TMPOP42166 694 aaKnown RBP20.17■□□□□ 0.82
BRD9-208ENST00000489816 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
BRD9-208ENST00000489816 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
BRD9-208ENST00000489816 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
BRD9-208ENST00000489816 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
BRD9-208ENST00000489816 MYH16Q9H6N6 1097 aa20.16■□□□□ 0.82
BRD9-208ENST00000489816 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
BRD9-208ENST00000489816 CAMSAP1Q5T5Y3 1602 aa20.14■□□□□ 0.82
BRD9-208ENST00000489816 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
BRD9-208ENST00000489816 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 NEXMIFQ5QGS0 1516 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 HDGFL2Q7Z4V5 671 aaPredicted RBP20.14■□□□□ 0.81
BRD9-208ENST00000489816 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
BRD9-208ENST00000489816 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
BRD9-208ENST00000489816 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
BRD9-208ENST00000489816 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
BRD9-208ENST00000489816 DIP2CQ9Y2E4 1556 aa20.13■□□□□ 0.81
BRD9-208ENST00000489816 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
BRD9-208ENST00000489816 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
BRD9-208ENST00000489816 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
BRD9-208ENST00000489816 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
BRD9-208ENST00000489816 SOX12O15370 315 aa20.1■□□□□ 0.81
BRD9-208ENST00000489816 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
BRD9-208ENST00000489816 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
BRD9-208ENST00000489816 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
BRD9-208ENST00000489816 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
BRD9-208ENST00000489816 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
BRD9-208ENST00000489816 EMILIN1Q9Y6C2 1016 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms