RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
SF1-218ENST00000489544 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
SF1-218ENST00000489544 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
SF1-218ENST00000489544 MSH6P52701 1360 aa11.78□□□□□ -0.52
SF1-218ENST00000489544 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.52
SF1-218ENST00000489544 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.52
SF1-218ENST00000489544 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
SF1-218ENST00000489544 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
SF1-218ENST00000489544 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
SF1-218ENST00000489544 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
SF1-218ENST00000489544 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
SF1-218ENST00000489544 IQSEC2Q5JU85 1478 aa11.76□□□□□ -0.53
SF1-218ENST00000489544 ATF3P18847 181 aa11.75□□□□□ -0.53
SF1-218ENST00000489544 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
SF1-218ENST00000489544 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
SF1-218ENST00000489544 DISP3Q9P2K9 1392 aa11.75□□□□□ -0.53
SF1-218ENST00000489544 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
SF1-218ENST00000489544 TOM1O60784 492 aa11.73□□□□□ -0.53
SF1-218ENST00000489544 ILDR2Q71H61 639 aa11.73□□□□□ -0.53
SF1-218ENST00000489544 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
SF1-218ENST00000489544 USP47Q96K76 1375 aa11.73□□□□□ -0.53
SF1-218ENST00000489544 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
SF1-218ENST00000489544 MST1RQ04912 1400 aa11.71□□□□□ -0.53
SF1-218ENST00000489544 DCCP43146 1447 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 EIF3AQ14152 1382 aaKnown RBP11.7□□□□□ -0.54
SF1-218ENST00000489544 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
SF1-218ENST00000489544 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 QRICH2Q9H0J4 1663 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
SF1-218ENST00000489544 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
SF1-218ENST00000489544 HSPA5P11021 654 aaKnown RBP11.69□□□□□ -0.54
SF1-218ENST00000489544 BRINP3Q76B58 766 aa11.69□□□□□ -0.54
SF1-218ENST00000489544 DDX17Q92841 729 aaKnown RBP11.69□□□□□ -0.54
SF1-218ENST00000489544 TESK2Q96S53 571 aa11.69□□□□□ -0.54
SF1-218ENST00000489544 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
SF1-218ENST00000489544 ADGRB2O60241 1585 aa11.68□□□□□ -0.54
SF1-218ENST00000489544 ESCO1Q5FWF5 840 aa11.68□□□□□ -0.54
SF1-218ENST00000489544 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
SF1-218ENST00000489544 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
SF1-218ENST00000489544 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
SF1-218ENST00000489544 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
SF1-218ENST00000489544 PMFBP1Q8TBY8 1022 aa11.66□□□□□ -0.54
SF1-218ENST00000489544 NUDT16Q96DE0 195 aaKnown RBP11.66□□□□□ -0.54
SF1-218ENST00000489544 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.54
SF1-218ENST00000489544 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
SF1-218ENST00000489544 SOCS7O14512 581 aa11.65□□□□□ -0.54
SF1-218ENST00000489544 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
SF1-218ENST00000489544 FOXO3O43524 673 aa11.64□□□□□ -0.55
SF1-218ENST00000489544 HSPA1LP34931 641 aa11.64□□□□□ -0.55
SF1-218ENST00000489544 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
SF1-218ENST00000489544 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
SF1-218ENST00000489544 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
SF1-218ENST00000489544 ATP7BP35670 1465 aa11.63□□□□□ -0.55
SF1-218ENST00000489544 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
SF1-218ENST00000489544 PHF8Q9UPP1 1060 aa11.63□□□□□ -0.55
SF1-218ENST00000489544 ANKARQ7Z5J8 1434 aa11.62□□□□□ -0.55
SF1-218ENST00000489544 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
SF1-218ENST00000489544 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
SF1-218ENST00000489544 TMF1P82094 1093 aa11.61□□□□□ -0.55
SF1-218ENST00000489544 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
SF1-218ENST00000489544 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
SF1-218ENST00000489544 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
SF1-218ENST00000489544 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
SF1-218ENST00000489544 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
SF1-218ENST00000489544 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
SF1-218ENST00000489544 SLC12A5Q9H2X9 1139 aa11.59□□□□□ -0.55
SF1-218ENST00000489544 ACEP12821 1306 aa11.59□□□□□ -0.55
SF1-218ENST00000489544 KRT28Q7Z3Y7 464 aa11.58□□□□□ -0.56
SF1-218ENST00000489544 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
SF1-218ENST00000489544 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 TOPAZ1Q8N9V7 1692 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 PSME1Q06323 249 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
SF1-218ENST00000489544 NPHP3Q7Z494 1330 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
SF1-218ENST00000489544 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
SF1-218ENST00000489544 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
SF1-218ENST00000489544 COL16A1Q07092 1604 aaPredicted RBP11.56□□□□□ -0.56
SF1-218ENST00000489544 PXDNQ92626 1479 aa11.56□□□□□ -0.56
SF1-218ENST00000489544 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
SF1-218ENST00000489544 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
SF1-218ENST00000489544 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
SF1-218ENST00000489544 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
SF1-218ENST00000489544 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
SF1-218ENST00000489544 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
SF1-218ENST00000489544 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
SF1-218ENST00000489544 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
SF1-218ENST00000489544 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
SF1-218ENST00000489544 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
SF1-218ENST00000489544 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
SF1-218ENST00000489544 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
SF1-218ENST00000489544 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
SF1-218ENST00000489544 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
SF1-218ENST00000489544 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
SF1-218ENST00000489544 USP6P35125 1406 aa11.52□□□□□ -0.57
SF1-218ENST00000489544 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
SF1-218ENST00000489544 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms