RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
LMO4-203ENST00000489303 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
LMO4-203ENST00000489303 LAMC1P11047 1609 aa19.69■□□□□ 0.74
LMO4-203ENST00000489303 NUTM2FA1L443 756 aa19.69■□□□□ 0.74
LMO4-203ENST00000489303 ADAMTS2O95450 1211 aa19.69■□□□□ 0.74
LMO4-203ENST00000489303 RXRBP28702 533 aa19.69■□□□□ 0.74
LMO4-203ENST00000489303 SOS2Q07890 1332 aaPredicted RBP19.69■□□□□ 0.74
LMO4-203ENST00000489303 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
LMO4-203ENST00000489303 UPF1Q92900 1129 aaKnown RBP eCLIP19.67■□□□□ 0.74
LMO4-203ENST00000489303 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
LMO4-203ENST00000489303 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
LMO4-203ENST00000489303 MYOM2P54296 1465 aa19.66■□□□□ 0.74
LMO4-203ENST00000489303 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
LMO4-203ENST00000489303 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
LMO4-203ENST00000489303 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
LMO4-203ENST00000489303 QTRT2Q9H974 415 aaKnown RBP19.64■□□□□ 0.73
LMO4-203ENST00000489303 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
LMO4-203ENST00000489303 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
LMO4-203ENST00000489303 CDC42BPGQ6DT37 1551 aa19.63■□□□□ 0.73
LMO4-203ENST00000489303 TECPR2O15040 1411 aa19.62■□□□□ 0.73
LMO4-203ENST00000489303 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
LMO4-203ENST00000489303 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
LMO4-203ENST00000489303 NGLY1Q96IV0 654 aa19.62■□□□□ 0.73
LMO4-203ENST00000489303 NRXN1Q9ULB1 1477 aa19.61■□□□□ 0.73
LMO4-203ENST00000489303 RGS12O14924 1447 aa19.61■□□□□ 0.73
LMO4-203ENST00000489303 ABCC11Q96J66 1382 aa19.61■□□□□ 0.73
LMO4-203ENST00000489303 FOXO3O43524 673 aa19.61■□□□□ 0.73
LMO4-203ENST00000489303 PXDNQ92626 1479 aa19.6■□□□□ 0.73
LMO4-203ENST00000489303 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
LMO4-203ENST00000489303 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
LMO4-203ENST00000489303 CDK12Q9NYV4 1490 aaPredicted RBP19.59■□□□□ 0.73
LMO4-203ENST00000489303 KNDC1Q76NI1 1749 aa19.59■□□□□ 0.73
LMO4-203ENST00000489303 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.72
LMO4-203ENST00000489303 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
LMO4-203ENST00000489303 SIRT1Q96EB6 747 aa19.57■□□□□ 0.72
LMO4-203ENST00000489303 USP21Q9UK80 565 aa19.56■□□□□ 0.72
LMO4-203ENST00000489303 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
LMO4-203ENST00000489303 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
LMO4-203ENST00000489303 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
LMO4-203ENST00000489303 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
LMO4-203ENST00000489303 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
LMO4-203ENST00000489303 POGKQ9P215 609 aa19.53■□□□□ 0.72
LMO4-203ENST00000489303 BCL9LQ86UU0 1499 aa19.5■□□□□ 0.71
LMO4-203ENST00000489303 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
LMO4-203ENST00000489303 ATRNO75882 1429 aa19.5■□□□□ 0.71
LMO4-203ENST00000489303 MARF1Q9Y4F3 1742 aaKnown RBP19.49■□□□□ 0.71
LMO4-203ENST00000489303 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
LMO4-203ENST00000489303 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
LMO4-203ENST00000489303 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
LMO4-203ENST00000489303 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
LMO4-203ENST00000489303 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
LMO4-203ENST00000489303 KRT28Q7Z3Y7 464 aa19.47■□□□□ 0.71
LMO4-203ENST00000489303 CABLES1Q8TDN4 633 aa19.46■□□□□ 0.71
LMO4-203ENST00000489303 DLC1Q96QB1 1528 aa19.46■□□□□ 0.71
LMO4-203ENST00000489303 ADGRB1O14514 1584 aa19.45■□□□□ 0.7
LMO4-203ENST00000489303 USP32Q8NFA0 1604 aa19.45■□□□□ 0.7
LMO4-203ENST00000489303 SIN3AQ96ST3 1273 aa19.45■□□□□ 0.7
LMO4-203ENST00000489303 PHF8Q9UPP1 1060 aa19.45■□□□□ 0.7
LMO4-203ENST00000489303 KIF1AQ12756 1690 aa19.45■□□□□ 0.7
LMO4-203ENST00000489303 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
LMO4-203ENST00000489303 PMFBP1Q8TBY8 1022 aa19.43■□□□□ 0.7
LMO4-203ENST00000489303 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
LMO4-203ENST00000489303 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
LMO4-203ENST00000489303 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
LMO4-203ENST00000489303 SLIT2O94813 1529 aa19.4■□□□□ 0.7
LMO4-203ENST00000489303 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
LMO4-203ENST00000489303 PRR36Q9H6K5 1346 aa19.39■□□□□ 0.69
LMO4-203ENST00000489303 TNS3Q68CZ2 1445 aa19.39■□□□□ 0.69
LMO4-203ENST00000489303 GLI3P10071 1580 aa19.39■□□□□ 0.69
LMO4-203ENST00000489303 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
LMO4-203ENST00000489303 EIF3AQ14152 1382 aaKnown RBP19.37■□□□□ 0.69
LMO4-203ENST00000489303 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
LMO4-203ENST00000489303 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
LMO4-203ENST00000489303 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
LMO4-203ENST00000489303 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
LMO4-203ENST00000489303 PSME1Q06323 249 aa19.36■□□□□ 0.69
LMO4-203ENST00000489303 NBPF1Q3BBV0 1214 aa19.36■□□□□ 0.69
LMO4-203ENST00000489303 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.36■□□□□ 0.69
LMO4-203ENST00000489303 EP400Q96L91 3159 aa19.36■□□□□ 0.69
LMO4-203ENST00000489303 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
LMO4-203ENST00000489303 WASLO00401 505 aaPredicted RBP19.34■□□□□ 0.69
LMO4-203ENST00000489303 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
LMO4-203ENST00000489303 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
LMO4-203ENST00000489303 SBNO1A3KN83 1393 aa19.33■□□□□ 0.69
LMO4-203ENST00000489303 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
LMO4-203ENST00000489303 PLCH1Q4KWH8 1693 aa19.33■□□□□ 0.68
LMO4-203ENST00000489303 BRWD3Q6RI45 1802 aa19.32■□□□□ 0.68
LMO4-203ENST00000489303 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
LMO4-203ENST00000489303 FAM83GA6ND36 823 aa19.31■□□□□ 0.68
LMO4-203ENST00000489303 ARHGEF28Q8N1W1 1705 aaKnown RBP19.3■□□□□ 0.68
LMO4-203ENST00000489303 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
LMO4-203ENST00000489303 TULP4Q9NRJ4 1543 aa19.29■□□□□ 0.68
LMO4-203ENST00000489303 CENPJQ9HC77 1338 aaPredicted RBP19.28■□□□□ 0.68
LMO4-203ENST00000489303 ARHGEF10O15013 1369 aa19.28■□□□□ 0.68
LMO4-203ENST00000489303 ROCK2O75116 1388 aaKnown RBP19.28■□□□□ 0.68
LMO4-203ENST00000489303 VPS72Q15906 364 aa19.27■□□□□ 0.68
LMO4-203ENST00000489303 SEPT12Q8IYM1 358 aa19.27■□□□□ 0.68
LMO4-203ENST00000489303 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
LMO4-203ENST00000489303 CCDC9Q9Y3X0 531 aaKnown RBP19.26■□□□□ 0.67
LMO4-203ENST00000489303 NWD2Q9ULI1 1742 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms