RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 FOXD1Q16676 465 aa16.25■□□□□ 0.19
YIPF3-207ENST00000488966 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
YIPF3-207ENST00000488966 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
YIPF3-207ENST00000488966 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
YIPF3-207ENST00000488966 XPCQ01831 940 aaPredicted RBP16.24■□□□□ 0.19
YIPF3-207ENST00000488966 ATRNO75882 1429 aa16.24■□□□□ 0.19
YIPF3-207ENST00000488966 MYOM2P54296 1465 aa16.23■□□□□ 0.19
YIPF3-207ENST00000488966 FOXO3O43524 673 aa16.23■□□□□ 0.19
YIPF3-207ENST00000488966 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
YIPF3-207ENST00000488966 STK26Q9P289 416 aa16.22■□□□□ 0.19
YIPF3-207ENST00000488966 PXDNQ92626 1479 aa16.22■□□□□ 0.19
YIPF3-207ENST00000488966 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
YIPF3-207ENST00000488966 RGL3Q3MIN7 710 aa16.21■□□□□ 0.19
YIPF3-207ENST00000488966 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.19
YIPF3-207ENST00000488966 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
YIPF3-207ENST00000488966 COL22A1Q8NFW1 1626 aaPredicted RBP16.2■□□□□ 0.18
YIPF3-207ENST00000488966 PPLO60437 1756 aa16.2■□□□□ 0.18
YIPF3-207ENST00000488966 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
YIPF3-207ENST00000488966 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
YIPF3-207ENST00000488966 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
YIPF3-207ENST00000488966 TECPR2O15040 1411 aa16.19■□□□□ 0.18
YIPF3-207ENST00000488966 SPATA31E1Q6ZUB1 1445 aa16.18■□□□□ 0.18
YIPF3-207ENST00000488966 ABCC11Q96J66 1382 aa16.17■□□□□ 0.18
YIPF3-207ENST00000488966 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
YIPF3-207ENST00000488966 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
YIPF3-207ENST00000488966 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
YIPF3-207ENST00000488966 MPHOSPH9Q99550 1183 aa16.14■□□□□ 0.17
YIPF3-207ENST00000488966 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
YIPF3-207ENST00000488966 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
YIPF3-207ENST00000488966 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
YIPF3-207ENST00000488966 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
YIPF3-207ENST00000488966 KRT28Q7Z3Y7 464 aa16.12■□□□□ 0.17
YIPF3-207ENST00000488966 CCDC125Q86Z20 511 aa16.12■□□□□ 0.17
YIPF3-207ENST00000488966 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
YIPF3-207ENST00000488966 SLIT2O94813 1529 aa16.11■□□□□ 0.17
YIPF3-207ENST00000488966 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
YIPF3-207ENST00000488966 SRCAPQ6ZRS2 3230 aa16.09■□□□□ 0.17
YIPF3-207ENST00000488966 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
YIPF3-207ENST00000488966 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
YIPF3-207ENST00000488966 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
YIPF3-207ENST00000488966 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
YIPF3-207ENST00000488966 GLI3P10071 1580 aa16.08■□□□□ 0.16
YIPF3-207ENST00000488966 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
YIPF3-207ENST00000488966 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
YIPF3-207ENST00000488966 KNDC1Q76NI1 1749 aa16.07■□□□□ 0.16
YIPF3-207ENST00000488966 FMN2Q9NZ56 1722 aa16.07■□□□□ 0.16
YIPF3-207ENST00000488966 MARF1Q9Y4F3 1742 aaKnown RBP16.07■□□□□ 0.16
YIPF3-207ENST00000488966 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
YIPF3-207ENST00000488966 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
YIPF3-207ENST00000488966 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-207ENST00000488966 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 PSME1Q06323 249 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 SAFB2Q14151 953 aaKnown RBP eCLIP16.05■□□□□ 0.16
YIPF3-207ENST00000488966 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 EP400Q96L91 3159 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 KIF1AQ12756 1690 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
YIPF3-207ENST00000488966 VPS72Q15906 364 aa16.04■□□□□ 0.16
YIPF3-207ENST00000488966 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
YIPF3-207ENST00000488966 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
YIPF3-207ENST00000488966 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.04■□□□□ 0.16
YIPF3-207ENST00000488966 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
YIPF3-207ENST00000488966 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
YIPF3-207ENST00000488966 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
YIPF3-207ENST00000488966 NRXN1Q9ULB1 1477 aa16.03■□□□□ 0.16
YIPF3-207ENST00000488966 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
YIPF3-207ENST00000488966 ONECUT3O60422 494 aaPredicted RBP16.01■□□□□ 0.15
YIPF3-207ENST00000488966 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
YIPF3-207ENST00000488966 FAM83GA6ND36 823 aa16■□□□□ 0.15
YIPF3-207ENST00000488966 ARHGEF10O15013 1369 aa16■□□□□ 0.15
YIPF3-207ENST00000488966 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
YIPF3-207ENST00000488966 POGKQ9P215 609 aa15.99■□□□□ 0.15
YIPF3-207ENST00000488966 KRT27Q7Z3Y8 459 aa15.98■□□□□ 0.15
YIPF3-207ENST00000488966 ANKARQ7Z5J8 1434 aa15.97■□□□□ 0.15
YIPF3-207ENST00000488966 RGPD8O14715 1765 aaPredicted RBP15.97■□□□□ 0.15
YIPF3-207ENST00000488966 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
YIPF3-207ENST00000488966 DLC1Q96QB1 1528 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 A0A0G2JS52 829 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 MYT1Q01538 1121 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 BRWD3Q6RI45 1802 aa15.95■□□□□ 0.14
YIPF3-207ENST00000488966 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
YIPF3-207ENST00000488966 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
YIPF3-207ENST00000488966 PLCH1Q4KWH8 1693 aa15.94■□□□□ 0.14
YIPF3-207ENST00000488966 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
YIPF3-207ENST00000488966 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
YIPF3-207ENST00000488966 ABCA3Q99758 1704 aa15.93■□□□□ 0.14
YIPF3-207ENST00000488966 NWD2Q9ULI1 1742 aa15.93■□□□□ 0.14
YIPF3-207ENST00000488966 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
YIPF3-207ENST00000488966 GPRASP1Q5JY77 1395 aa15.92■□□□□ 0.14
YIPF3-207ENST00000488966 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
YIPF3-207ENST00000488966 PSDA5PKW4 1024 aaPredicted RBP15.9■□□□□ 0.14
YIPF3-207ENST00000488966 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
YIPF3-207ENST00000488966 BAG6P46379 1132 aa15.9■□□□□ 0.14
YIPF3-207ENST00000488966 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
YIPF3-207ENST00000488966 RAB3GAP2Q9H2M9 1393 aa15.89■□□□□ 0.13
YIPF3-207ENST00000488966 TRPM3Q9HCF6 1732 aaPredicted RBP15.89■□□□□ 0.13
YIPF3-207ENST00000488966 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
YIPF3-207ENST00000488966 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms