RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
ATPAF2-207ENST00000488753 SOS2Q07890 1332 aaPredicted RBP19.28■□□□□ 0.68
ATPAF2-207ENST00000488753 SIRT1Q96EB6 747 aa19.28■□□□□ 0.68
ATPAF2-207ENST00000488753 C14orf93Q9H972 538 aaKnown RBP19.28■□□□□ 0.68
ATPAF2-207ENST00000488753 STK26Q9P289 416 aa19.28■□□□□ 0.68
ATPAF2-207ENST00000488753 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
ATPAF2-207ENST00000488753 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
ATPAF2-207ENST00000488753 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
ATPAF2-207ENST00000488753 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
ATPAF2-207ENST00000488753 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
ATPAF2-207ENST00000488753 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
ATPAF2-207ENST00000488753 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
ATPAF2-207ENST00000488753 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
ATPAF2-207ENST00000488753 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-207ENST00000488753 ESCO1Q5FWF5 840 aa19.22■□□□□ 0.67
ATPAF2-207ENST00000488753 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
ATPAF2-207ENST00000488753 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
ATPAF2-207ENST00000488753 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.67
ATPAF2-207ENST00000488753 AFF2P51816 1311 aa19.21■□□□□ 0.67
ATPAF2-207ENST00000488753 RXRBP28702 533 aa19.19■□□□□ 0.66
ATPAF2-207ENST00000488753 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
ATPAF2-207ENST00000488753 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
ATPAF2-207ENST00000488753 PXDNQ92626 1479 aa19.16■□□□□ 0.66
ATPAF2-207ENST00000488753 FOXO3O43524 673 aa19.16■□□□□ 0.66
ATPAF2-207ENST00000488753 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
ATPAF2-207ENST00000488753 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.66
ATPAF2-207ENST00000488753 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
ATPAF2-207ENST00000488753 NGLY1Q96IV0 654 aa19.14■□□□□ 0.65
ATPAF2-207ENST00000488753 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.65
ATPAF2-207ENST00000488753 NUTM2FA1L443 756 aa19.13■□□□□ 0.65
ATPAF2-207ENST00000488753 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
ATPAF2-207ENST00000488753 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
ATPAF2-207ENST00000488753 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
ATPAF2-207ENST00000488753 RBM6P78332 1123 aaKnown RBP19.11■□□□□ 0.65
ATPAF2-207ENST00000488753 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
ATPAF2-207ENST00000488753 POGKQ9P215 609 aa19.11■□□□□ 0.65
ATPAF2-207ENST00000488753 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
ATPAF2-207ENST00000488753 XPCQ01831 940 aaPredicted RBP19.1■□□□□ 0.65
ATPAF2-207ENST00000488753 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
ATPAF2-207ENST00000488753 PHF8Q9UPP1 1060 aa19.09■□□□□ 0.65
ATPAF2-207ENST00000488753 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
ATPAF2-207ENST00000488753 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
ATPAF2-207ENST00000488753 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
ATPAF2-207ENST00000488753 USP21Q9UK80 565 aa19.08■□□□□ 0.64
ATPAF2-207ENST00000488753 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
ATPAF2-207ENST00000488753 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
ATPAF2-207ENST00000488753 TRPC5Q9UL62 973 aaPredicted RBP19.07■□□□□ 0.64
ATPAF2-207ENST00000488753 TRAK1Q9UPV9 953 aa19.07■□□□□ 0.64
ATPAF2-207ENST00000488753 PSME1Q06323 249 aa19.06■□□□□ 0.64
ATPAF2-207ENST00000488753 KRT28Q7Z3Y7 464 aa19.06■□□□□ 0.64
ATPAF2-207ENST00000488753 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
ATPAF2-207ENST00000488753 UPF1Q92900 1129 aaKnown RBP eCLIP19.05■□□□□ 0.64
ATPAF2-207ENST00000488753 RGS12O14924 1447 aa19.04■□□□□ 0.64
ATPAF2-207ENST00000488753 SBNO1A3KN83 1393 aa19.04■□□□□ 0.64
ATPAF2-207ENST00000488753 ATRNO75882 1429 aa19.02■□□□□ 0.64
ATPAF2-207ENST00000488753 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.64
ATPAF2-207ENST00000488753 ARHGEF10O15013 1369 aa19.01■□□□□ 0.63
ATPAF2-207ENST00000488753 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
ATPAF2-207ENST00000488753 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
ATPAF2-207ENST00000488753 WASLO00401 505 aaPredicted RBP18.99■□□□□ 0.63
ATPAF2-207ENST00000488753 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
ATPAF2-207ENST00000488753 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
ATPAF2-207ENST00000488753 USP32Q8NFA0 1604 aa18.98■□□□□ 0.63
ATPAF2-207ENST00000488753 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
ATPAF2-207ENST00000488753 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
ATPAF2-207ENST00000488753 SLIT2O94813 1529 aa18.96■□□□□ 0.63
ATPAF2-207ENST00000488753 MARF1Q9Y4F3 1742 aaKnown RBP18.96■□□□□ 0.63
ATPAF2-207ENST00000488753 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
ATPAF2-207ENST00000488753 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
ATPAF2-207ENST00000488753 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
ATPAF2-207ENST00000488753 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
ATPAF2-207ENST00000488753 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
ATPAF2-207ENST00000488753 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
ATPAF2-207ENST00000488753 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
ATPAF2-207ENST00000488753 ARHGEF28Q8N1W1 1705 aaKnown RBP18.92■□□□□ 0.62
ATPAF2-207ENST00000488753 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
ATPAF2-207ENST00000488753 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
ATPAF2-207ENST00000488753 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
ATPAF2-207ENST00000488753 NGDNQ8NEJ9 315 aaKnown RBP18.9■□□□□ 0.62
ATPAF2-207ENST00000488753 ATP7BP35670 1465 aa18.9■□□□□ 0.62
ATPAF2-207ENST00000488753 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
ATPAF2-207ENST00000488753 TRPM3Q9HCF6 1732 aaPredicted RBP18.88■□□□□ 0.61
ATPAF2-207ENST00000488753 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
ATPAF2-207ENST00000488753 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
ATPAF2-207ENST00000488753 VPS72Q15906 364 aa18.87■□□□□ 0.61
ATPAF2-207ENST00000488753 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
ATPAF2-207ENST00000488753 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
ATPAF2-207ENST00000488753 ABCA3Q99758 1704 aa18.86■□□□□ 0.61
ATPAF2-207ENST00000488753 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
ATPAF2-207ENST00000488753 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
ATPAF2-207ENST00000488753 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 CCDC125Q86Z20 511 aa18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 GLI3P10071 1580 aa18.84■□□□□ 0.61
ATPAF2-207ENST00000488753 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
ATPAF2-207ENST00000488753 PLEKHG3A1L390 1219 aa18.83■□□□□ 0.6
ATPAF2-207ENST00000488753 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.6
ATPAF2-207ENST00000488753 PLEKHG5O94827 1062 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms