RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
PSME4-209ENST00000488687 SYNMO15061 1565 aa8.35□□□□□ -1.07
PSME4-209ENST00000488687 PPLO60437 1756 aa8.35□□□□□ -1.07
PSME4-209ENST00000488687 AGLP35573 1532 aa8.35□□□□□ -1.07
PSME4-209ENST00000488687 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
PSME4-209ENST00000488687 KLHL34Q8N239 644 aa8.35□□□□□ -1.07
PSME4-209ENST00000488687 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
PSME4-209ENST00000488687 PIK3C2BO00750 1634 aa8.34□□□□□ -1.07
PSME4-209ENST00000488687 NRXN1Q9ULB1 1477 aa8.34□□□□□ -1.07
PSME4-209ENST00000488687 STRCQ7RTU9 1775 aa8.34□□□□□ -1.07
PSME4-209ENST00000488687 MYBBP1AQ9BQG0 1328 aaKnown RBP8.34□□□□□ -1.07
PSME4-209ENST00000488687 C14orf93Q9H972 538 aaKnown RBP8.34□□□□□ -1.07
PSME4-209ENST00000488687 TRAK1Q9UPV9 953 aa8.34□□□□□ -1.07
PSME4-209ENST00000488687 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
PSME4-209ENST00000488687 TPRNQ4KMQ1 711 aa8.33□□□□□ -1.08
PSME4-209ENST00000488687 PIK3C2GO75747 1445 aa8.33□□□□□ -1.08
PSME4-209ENST00000488687 CLTCQ00610 1675 aaKnown RBP8.33□□□□□ -1.08
PSME4-209ENST00000488687 CC2D1BQ5T0F9 858 aaKnown RBP8.33□□□□□ -1.08
PSME4-209ENST00000488687 KNSTRNQ9Y448 316 aa8.33□□□□□ -1.08
PSME4-209ENST00000488687 TMEM132EQ6IEE7 984 aa8.33□□□□□ -1.08
PSME4-209ENST00000488687 CENPJQ9HC77 1338 aaPredicted RBP8.32□□□□□ -1.08
PSME4-209ENST00000488687 SETBP1Q9Y6X0 1596 aa8.32□□□□□ -1.08
PSME4-209ENST00000488687 C3P01024 1663 aa8.32□□□□□ -1.08
PSME4-209ENST00000488687 NEFLP07196 543 aa8.32□□□□□ -1.08
PSME4-209ENST00000488687 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
PSME4-209ENST00000488687 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
PSME4-209ENST00000488687 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
PSME4-209ENST00000488687 NEXMIFQ5QGS0 1516 aa8.31□□□□□ -1.08
PSME4-209ENST00000488687 KDM5AP29375 1690 aaKnown RBP8.31□□□□□ -1.08
PSME4-209ENST00000488687 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
PSME4-209ENST00000488687 C1QBPQ07021 282 aaKnown RBP8.31□□□□□ -1.08
PSME4-209ENST00000488687 BRD4O60885 1362 aaPredicted RBP8.3□□□□□ -1.08
PSME4-209ENST00000488687 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
PSME4-209ENST00000488687 NLRP13Q86W25 1043 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 CERKQ8TCT0 537 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 LTBP4Q8N2S1 1624 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 DSG3P32926 999 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
PSME4-209ENST00000488687 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
PSME4-209ENST00000488687 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 TMEM131LA2VDJ0 1609 aa8.3□□□□□ -1.08
PSME4-209ENST00000488687 PARD3Q8TEW0 1356 aa8.29□□□□□ -1.08
PSME4-209ENST00000488687 STK26Q9P289 416 aa8.29□□□□□ -1.08
PSME4-209ENST00000488687 PNISRQ8TF01 805 aaKnown RBP8.28□□□□□ -1.08
PSME4-209ENST00000488687 ZBED9Q6R2W3 1325 aa8.28□□□□□ -1.08
PSME4-209ENST00000488687 ZMYM3Q14202 1370 aa8.28□□□□□ -1.08
PSME4-209ENST00000488687 ZFYVE9O95405 1425 aa8.28□□□□□ -1.08
PSME4-209ENST00000488687 SUPT16HQ9Y5B9 1047 aaKnown RBP8.28□□□□□ -1.08
PSME4-209ENST00000488687 MYO3AQ8NEV4 1616 aa8.28□□□□□ -1.08
PSME4-209ENST00000488687 SBNO2Q9Y2G9 1366 aa8.27□□□□□ -1.08
PSME4-209ENST00000488687 ADGRB1O14514 1584 aa8.27□□□□□ -1.08
PSME4-209ENST00000488687 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.09
PSME4-209ENST00000488687 SAFB2Q14151 953 aaKnown RBP eCLIP8.27□□□□□ -1.09
PSME4-209ENST00000488687 EVC2Q86UK5 1308 aa8.26□□□□□ -1.09
PSME4-209ENST00000488687 POGKQ9P215 609 aa8.26□□□□□ -1.09
PSME4-209ENST00000488687 HDGFP51858 240 aaKnown RBP8.26□□□□□ -1.09
PSME4-209ENST00000488687 ASXL1Q8IXJ9 1541 aa8.25□□□□□ -1.09
PSME4-209ENST00000488687 MYOM1P52179 1685 aa8.25□□□□□ -1.09
PSME4-209ENST00000488687 PLCD3Q8N3E9 789 aa8.25□□□□□ -1.09
PSME4-209ENST00000488687 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
PSME4-209ENST00000488687 RIMS2Q9UQ26 1411 aa8.25□□□□□ -1.09
PSME4-209ENST00000488687 A2ML1A8K2U0 1454 aa8.24□□□□□ -1.09
PSME4-209ENST00000488687 SENP3-EIF4A1A0A087X0R7 540 aa8.24□□□□□ -1.09
PSME4-209ENST00000488687 RNF25Q96BH1 459 aaPredicted RBP8.24□□□□□ -1.09
PSME4-209ENST00000488687 TNRQ92752 1358 aa8.24□□□□□ -1.09
PSME4-209ENST00000488687 SPRYD3Q8NCJ5 442 aa8.24□□□□□ -1.09
PSME4-209ENST00000488687 ARHGEF28Q8N1W1 1705 aaKnown RBP8.24□□□□□ -1.09
PSME4-209ENST00000488687 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
PSME4-209ENST00000488687 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 PPP2R1AP30153 589 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 PRAM1Q96QH2 718 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 YTHDC2Q9H6S0 1430 aaKnown RBP8.23□□□□□ -1.09
PSME4-209ENST00000488687 LRPPRCP42704 1394 aaKnown RBP8.23□□□□□ -1.09
PSME4-209ENST00000488687 WDR43Q15061 677 aaKnown RBP eCLIP8.23□□□□□ -1.09
PSME4-209ENST00000488687 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 SLC12A5Q9H2X9 1139 aa8.23□□□□□ -1.09
PSME4-209ENST00000488687 ALKQ9UM73 1620 aa8.22□□□□□ -1.09
PSME4-209ENST00000488687 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
PSME4-209ENST00000488687 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
PSME4-209ENST00000488687 ARXQ96QS3 562 aa8.22□□□□□ -1.09
PSME4-209ENST00000488687 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
PSME4-209ENST00000488687 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
PSME4-209ENST00000488687 ZNF142P52746 1687 aaPredicted RBP8.22□□□□□ -1.09
PSME4-209ENST00000488687 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
PSME4-209ENST00000488687 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
PSME4-209ENST00000488687 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
PSME4-209ENST00000488687 NSD3Q9BZ95 1437 aa8.21□□□□□ -1.1
PSME4-209ENST00000488687 MORC1Q86VD1 984 aa8.21□□□□□ -1.1
PSME4-209ENST00000488687 LRP5O75197 1615 aa8.2□□□□□ -1.1
PSME4-209ENST00000488687 TULP4Q9NRJ4 1543 aa8.2□□□□□ -1.1
PSME4-209ENST00000488687 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
PSME4-209ENST00000488687 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
PSME4-209ENST00000488687 TNNT2P45379 298 aaPredicted RBP8.18□□□□□ -1.1
PSME4-209ENST00000488687 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
PSME4-209ENST00000488687 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
PSME4-209ENST00000488687 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
PSME4-209ENST00000488687 ATAD2Q6PL18 1390 aa8.18□□□□□ -1.1
PSME4-209ENST00000488687 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms