RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 SBNO2Q9Y2G9 1366 aa21.09■□□□□ 0.97
CTNS-206ENST00000488623 QRICH2Q9H0J4 1663 aa21.09■□□□□ 0.97
CTNS-206ENST00000488623 PLEKHH1Q9ULM0 1364 aa21.08■□□□□ 0.96
CTNS-206ENST00000488623 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
CTNS-206ENST00000488623 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
CTNS-206ENST00000488623 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
CTNS-206ENST00000488623 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
CTNS-206ENST00000488623 FAM135BQ49AJ0 1406 aa21.06■□□□□ 0.96
CTNS-206ENST00000488623 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
CTNS-206ENST00000488623 KCNA6P17658 529 aa21.04■□□□□ 0.96
CTNS-206ENST00000488623 XRN1Q8IZH2 1706 aaKnown RBP21.04■□□□□ 0.96
CTNS-206ENST00000488623 MINK1Q8N4C8 1332 aaPredicted RBP21.04■□□□□ 0.96
CTNS-206ENST00000488623 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
CTNS-206ENST00000488623 CDCA8Q53HL2 280 aa21.01■□□□□ 0.95
CTNS-206ENST00000488623 PTCH1Q13635 1447 aa21■□□□□ 0.95
CTNS-206ENST00000488623 EVC2Q86UK5 1308 aa21■□□□□ 0.95
CTNS-206ENST00000488623 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
CTNS-206ENST00000488623 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
CTNS-206ENST00000488623 TULP4Q9NRJ4 1543 aa20.99■□□□□ 0.95
CTNS-206ENST00000488623 TOM1O60784 492 aa20.97■□□□□ 0.95
CTNS-206ENST00000488623 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
CTNS-206ENST00000488623 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.97■□□□□ 0.95
CTNS-206ENST00000488623 CDK19Q9BWU1 502 aa20.96■□□□□ 0.95
CTNS-206ENST00000488623 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
CTNS-206ENST00000488623 NWD1Q149M9 1564 aa20.95■□□□□ 0.94
CTNS-206ENST00000488623 PIP4K2BP78356 416 aa20.95■□□□□ 0.94
CTNS-206ENST00000488623 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
CTNS-206ENST00000488623 WASLO00401 505 aaPredicted RBP20.93■□□□□ 0.94
CTNS-206ENST00000488623 SRPK2P78362 688 aaKnown RBP20.91■□□□□ 0.94
CTNS-206ENST00000488623 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
CTNS-206ENST00000488623 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
CTNS-206ENST00000488623 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
CTNS-206ENST00000488623 PANK3Q9H999 370 aa20.88■□□□□ 0.93
CTNS-206ENST00000488623 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
CTNS-206ENST00000488623 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
CTNS-206ENST00000488623 MYOM1P52179 1685 aa20.86■□□□□ 0.93
CTNS-206ENST00000488623 HSPA1LP34931 641 aa20.85■□□□□ 0.93
CTNS-206ENST00000488623 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
CTNS-206ENST00000488623 ATAD2Q6PL18 1390 aa20.85■□□□□ 0.93
CTNS-206ENST00000488623 NUDT16Q96DE0 195 aaKnown RBP20.84■□□□□ 0.93
CTNS-206ENST00000488623 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
CTNS-206ENST00000488623 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
CTNS-206ENST00000488623 NALCNQ8IZF0 1738 aa20.82■□□□□ 0.92
CTNS-206ENST00000488623 ADGRL3Q9HAR2 1447 aa20.82■□□□□ 0.92
CTNS-206ENST00000488623 CABP1Q9NZU7 370 aa20.81■□□□□ 0.92
CTNS-206ENST00000488623 TMEM94Q12767 1356 aa20.81■□□□□ 0.92
CTNS-206ENST00000488623 NUTM2FA1L443 756 aa20.8■□□□□ 0.92
CTNS-206ENST00000488623 C14orf37Q86TY3 774 aa20.8■□□□□ 0.92
CTNS-206ENST00000488623 MIER1Q8N108 512 aa20.8■□□□□ 0.92
CTNS-206ENST00000488623 NCOA3Q9Y6Q9 1424 aa20.79■□□□□ 0.92
CTNS-206ENST00000488623 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
CTNS-206ENST00000488623 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
CTNS-206ENST00000488623 NINLQ9Y2I6 1382 aa20.78■□□□□ 0.92
CTNS-206ENST00000488623 ATP7BP35670 1465 aa20.77■□□□□ 0.92
CTNS-206ENST00000488623 C19orf44Q9H6X5 657 aa20.77■□□□□ 0.92
CTNS-206ENST00000488623 FMN2Q9NZ56 1722 aa20.77■□□□□ 0.92
CTNS-206ENST00000488623 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
CTNS-206ENST00000488623 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
CTNS-206ENST00000488623 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
CTNS-206ENST00000488623 RGPD8O14715 1765 aaPredicted RBP20.75■□□□□ 0.91
CTNS-206ENST00000488623 ANP32CO43423 234 aa20.75■□□□□ 0.91
CTNS-206ENST00000488623 CD163L1Q9NR16 1453 aa20.75■□□□□ 0.91
CTNS-206ENST00000488623 ANKRD36BQ8N2N9 1353 aa20.74■□□□□ 0.91
CTNS-206ENST00000488623 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
CTNS-206ENST00000488623 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
CTNS-206ENST00000488623 ANKARQ7Z5J8 1434 aa20.73■□□□□ 0.91
CTNS-206ENST00000488623 ILDR2Q71H61 639 aa20.73■□□□□ 0.91
CTNS-206ENST00000488623 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
CTNS-206ENST00000488623 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
CTNS-206ENST00000488623 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
CTNS-206ENST00000488623 A0A1W2PP64 1363 aa20.72■□□□□ 0.91
CTNS-206ENST00000488623 ROBO1Q9Y6N7 1651 aa20.71■□□□□ 0.91
CTNS-206ENST00000488623 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
CTNS-206ENST00000488623 HDGFL2Q7Z4V5 671 aaPredicted RBP20.71■□□□□ 0.91
CTNS-206ENST00000488623 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
CTNS-206ENST00000488623 MSH6P52701 1360 aa20.7■□□□□ 0.9
CTNS-206ENST00000488623 CPSF1Q10570 1443 aaKnown RBP20.7■□□□□ 0.9
CTNS-206ENST00000488623 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
CTNS-206ENST00000488623 ATF3P18847 181 aa20.69■□□□□ 0.9
CTNS-206ENST00000488623 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
CTNS-206ENST00000488623 PMFBP1Q8TBY8 1022 aa20.68■□□□□ 0.9
CTNS-206ENST00000488623 ACEP12821 1306 aa20.68■□□□□ 0.9
CTNS-206ENST00000488623 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
CTNS-206ENST00000488623 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
CTNS-206ENST00000488623 ZNF692Q9BU19 519 aaPredicted RBP20.67■□□□□ 0.9
CTNS-206ENST00000488623 DCCP43146 1447 aa20.67■□□□□ 0.9
CTNS-206ENST00000488623 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
CTNS-206ENST00000488623 AKAP12Q02952 1782 aa20.65■□□□□ 0.9
CTNS-206ENST00000488623 C1orf167Q5SNV9 1468 aa20.65■□□□□ 0.9
CTNS-206ENST00000488623 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
CTNS-206ENST00000488623 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
CTNS-206ENST00000488623 PHF8Q9UPP1 1060 aa20.65■□□□□ 0.9
CTNS-206ENST00000488623 MST1RQ04912 1400 aa20.64■□□□□ 0.89
CTNS-206ENST00000488623 POLR3AO14802 1390 aaPredicted RBP20.64■□□□□ 0.89
CTNS-206ENST00000488623 ESCO1Q5FWF5 840 aa20.64■□□□□ 0.89
CTNS-206ENST00000488623 ORAI2Q96SN7 254 aa20.64■□□□□ 0.89
CTNS-206ENST00000488623 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
CTNS-206ENST00000488623 RALBP1Q15311 655 aa20.62■□□□□ 0.89
CTNS-206ENST00000488623 PHLPP1O60346 1717 aa20.61■□□□□ 0.89
CTNS-206ENST00000488623 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms