RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
PDAP1-203ENST00000488214 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
PDAP1-203ENST00000488214 KIF20BQ96Q89 1820 aa9.54□□□□□ -0.88
PDAP1-203ENST00000488214 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
PDAP1-203ENST00000488214 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
PDAP1-203ENST00000488214 ROBO2Q9HCK4 1378 aa9.53□□□□□ -0.88
PDAP1-203ENST00000488214 KDM4FA0A1W2PPD8 638 aa9.53□□□□□ -0.88
PDAP1-203ENST00000488214 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
PDAP1-203ENST00000488214 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
PDAP1-203ENST00000488214 SLC24A1O60721 1099 aa9.52□□□□□ -0.89
PDAP1-203ENST00000488214 ANKRD26Q9UPS8 1709 aa9.52□□□□□ -0.89
PDAP1-203ENST00000488214 AKAP12Q02952 1782 aa9.52□□□□□ -0.89
PDAP1-203ENST00000488214 STRCQ7RTU9 1775 aa9.52□□□□□ -0.89
PDAP1-203ENST00000488214 FMN2Q9NZ56 1722 aa9.51□□□□□ -0.89
PDAP1-203ENST00000488214 MON2Q7Z3U7 1717 aa9.51□□□□□ -0.89
PDAP1-203ENST00000488214 PIK3R4Q99570 1358 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
PDAP1-203ENST00000488214 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
PDAP1-203ENST00000488214 CNGB1Q14028 1251 aaPredicted RBP9.5□□□□□ -0.89
PDAP1-203ENST00000488214 WAPLQ7Z5K2 1190 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 TBX22Q9Y458 520 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 CDC42BPGQ6DT37 1551 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
PDAP1-203ENST00000488214 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
PDAP1-203ENST00000488214 KTN1Q86UP2 1357 aaKnown RBP9.49□□□□□ -0.89
PDAP1-203ENST00000488214 NINLQ9Y2I6 1382 aa9.49□□□□□ -0.89
PDAP1-203ENST00000488214 ATP7BP35670 1465 aa9.48□□□□□ -0.89
PDAP1-203ENST00000488214 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
PDAP1-203ENST00000488214 PANK3Q9H999 370 aa9.48□□□□□ -0.89
PDAP1-203ENST00000488214 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
PDAP1-203ENST00000488214 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
PDAP1-203ENST00000488214 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
PDAP1-203ENST00000488214 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
PDAP1-203ENST00000488214 HSPA2P54652 639 aa9.47□□□□□ -0.89
PDAP1-203ENST00000488214 YTHDC1Q96MU7 727 aaKnown RBP9.47□□□□□ -0.89
PDAP1-203ENST00000488214 PRKRIP1Q9H875 184 aaPredicted RBP9.47□□□□□ -0.89
PDAP1-203ENST00000488214 AMOTL2Q9Y2J4 779 aa9.47□□□□□ -0.89
PDAP1-203ENST00000488214 A0A1W2PP64 1363 aa9.46□□□□□ -0.9
PDAP1-203ENST00000488214 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
PDAP1-203ENST00000488214 PARD3Q8TEW0 1356 aa9.46□□□□□ -0.9
PDAP1-203ENST00000488214 CCER2I3L3R5 266 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 KCNA6P17658 529 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
PDAP1-203ENST00000488214 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
PDAP1-203ENST00000488214 XIRP1Q702N8 1843 aaKnown RBP9.45□□□□□ -0.9
PDAP1-203ENST00000488214 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
PDAP1-203ENST00000488214 CC2D1BQ5T0F9 858 aaKnown RBP9.44□□□□□ -0.9
PDAP1-203ENST00000488214 ADGRL3Q9HAR2 1447 aa9.44□□□□□ -0.9
PDAP1-203ENST00000488214 SLC12A5Q9H2X9 1139 aa9.43□□□□□ -0.9
PDAP1-203ENST00000488214 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
PDAP1-203ENST00000488214 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
PDAP1-203ENST00000488214 RALBP1Q15311 655 aa9.42□□□□□ -0.9
PDAP1-203ENST00000488214 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
PDAP1-203ENST00000488214 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
PDAP1-203ENST00000488214 MRS2Q9HD23 443 aa9.41□□□□□ -0.9
PDAP1-203ENST00000488214 KIF1AQ12756 1690 aa9.41□□□□□ -0.9
PDAP1-203ENST00000488214 ANKARQ7Z5J8 1434 aa9.4□□□□□ -0.9
PDAP1-203ENST00000488214 AMER1Q5JTC6 1135 aaPredicted RBP9.4□□□□□ -0.9
PDAP1-203ENST00000488214 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
PDAP1-203ENST00000488214 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.9
PDAP1-203ENST00000488214 TERF2IPQ9NYB0 399 aa9.4□□□□□ -0.9
PDAP1-203ENST00000488214 NSD2O96028 1365 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 CGNL1Q0VF96 1302 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 C14orf37Q86TY3 774 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
PDAP1-203ENST00000488214 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
PDAP1-203ENST00000488214 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
PDAP1-203ENST00000488214 BRD4O60885 1362 aaPredicted RBP9.38□□□□□ -0.91
PDAP1-203ENST00000488214 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
PDAP1-203ENST00000488214 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
PDAP1-203ENST00000488214 PIK3C2AO00443 1686 aa9.38□□□□□ -0.91
PDAP1-203ENST00000488214 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
PDAP1-203ENST00000488214 USP54Q70EL1 1684 aa9.37□□□□□ -0.91
PDAP1-203ENST00000488214 MAP2P11137 1827 aaKnown RBP9.36□□□□□ -0.91
PDAP1-203ENST00000488214 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
PDAP1-203ENST00000488214 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
PDAP1-203ENST00000488214 USP6P35125 1406 aa9.36□□□□□ -0.91
PDAP1-203ENST00000488214 TMEM94Q12767 1356 aa9.36□□□□□ -0.91
PDAP1-203ENST00000488214 DCCP43146 1447 aa9.35□□□□□ -0.91
PDAP1-203ENST00000488214 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
PDAP1-203ENST00000488214 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
PDAP1-203ENST00000488214 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.91
PDAP1-203ENST00000488214 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
PDAP1-203ENST00000488214 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
PDAP1-203ENST00000488214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDAP1-203ENST00000488214 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
PDAP1-203ENST00000488214 ACEP12821 1306 aa9.33□□□□□ -0.92
PDAP1-203ENST00000488214 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
PDAP1-203ENST00000488214 TNNT2P45379 298 aaPredicted RBP9.33□□□□□ -0.92
PDAP1-203ENST00000488214 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
PDAP1-203ENST00000488214 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms