RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 HRCP23327 699 aa18.28■□□□□ 0.52
SREBF1-215ENST00000487401 RXRBP28702 533 aa18.28■□□□□ 0.52
SREBF1-215ENST00000487401 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
SREBF1-215ENST00000487401 C8orf37Q96NL8 207 aa18.28■□□□□ 0.52
SREBF1-215ENST00000487401 AFF2P51816 1311 aa18.27■□□□□ 0.52
SREBF1-215ENST00000487401 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
SREBF1-215ENST00000487401 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
SREBF1-215ENST00000487401 TECPR2O15040 1411 aa18.26■□□□□ 0.51
SREBF1-215ENST00000487401 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
SREBF1-215ENST00000487401 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
SREBF1-215ENST00000487401 PPLO60437 1756 aa18.26■□□□□ 0.51
SREBF1-215ENST00000487401 FOXO3O43524 673 aa18.25■□□□□ 0.51
SREBF1-215ENST00000487401 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
SREBF1-215ENST00000487401 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
SREBF1-215ENST00000487401 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
SREBF1-215ENST00000487401 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
SREBF1-215ENST00000487401 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
SREBF1-215ENST00000487401 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
SREBF1-215ENST00000487401 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-215ENST00000487401 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
SREBF1-215ENST00000487401 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
SREBF1-215ENST00000487401 QTRT2Q9H974 415 aaKnown RBP18.22■□□□□ 0.51
SREBF1-215ENST00000487401 POGKQ9P215 609 aa18.22■□□□□ 0.51
SREBF1-215ENST00000487401 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
SREBF1-215ENST00000487401 MYOM2P54296 1465 aa18.2■□□□□ 0.5
SREBF1-215ENST00000487401 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
SREBF1-215ENST00000487401 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
SREBF1-215ENST00000487401 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
SREBF1-215ENST00000487401 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
SREBF1-215ENST00000487401 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
SREBF1-215ENST00000487401 TRAK1Q9UPV9 953 aa18.17■□□□□ 0.5
SREBF1-215ENST00000487401 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
SREBF1-215ENST00000487401 USP21Q9UK80 565 aa18.16■□□□□ 0.5
SREBF1-215ENST00000487401 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
SREBF1-215ENST00000487401 PSME1Q06323 249 aa18.15■□□□□ 0.5
SREBF1-215ENST00000487401 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-215ENST00000487401 TRPC5Q9UL62 973 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-215ENST00000487401 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
SREBF1-215ENST00000487401 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
SREBF1-215ENST00000487401 SPATA31A3Q5VYP0 1347 aa18.12■□□□□ 0.49
SREBF1-215ENST00000487401 PXDNQ92626 1479 aa18.12■□□□□ 0.49
SREBF1-215ENST00000487401 LAMC1P11047 1609 aa18.12■□□□□ 0.49
SREBF1-215ENST00000487401 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-215ENST00000487401 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-215ENST00000487401 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-215ENST00000487401 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-215ENST00000487401 LMOD2Q6P5Q4 547 aa18.09■□□□□ 0.49
SREBF1-215ENST00000487401 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.48
SREBF1-215ENST00000487401 KNDC1Q76NI1 1749 aa18.07■□□□□ 0.48
SREBF1-215ENST00000487401 PLEKHG5O94827 1062 aa18.07■□□□□ 0.48
SREBF1-215ENST00000487401 DLC1Q96QB1 1528 aa18.07■□□□□ 0.48
SREBF1-215ENST00000487401 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-215ENST00000487401 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
SREBF1-215ENST00000487401 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
SREBF1-215ENST00000487401 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
SREBF1-215ENST00000487401 RGS12O14924 1447 aa18.04■□□□□ 0.48
SREBF1-215ENST00000487401 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
SREBF1-215ENST00000487401 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
SREBF1-215ENST00000487401 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
SREBF1-215ENST00000487401 ATRNO75882 1429 aa18.03■□□□□ 0.48
SREBF1-215ENST00000487401 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
SREBF1-215ENST00000487401 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
SREBF1-215ENST00000487401 ARHGEF10O15013 1369 aa18.02■□□□□ 0.47
SREBF1-215ENST00000487401 GPRASP1Q5JY77 1395 aa18.02■□□□□ 0.47
SREBF1-215ENST00000487401 GJD4Q96KN9 370 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-215ENST00000487401 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-215ENST00000487401 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
SREBF1-215ENST00000487401 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
SREBF1-215ENST00000487401 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
SREBF1-215ENST00000487401 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
SREBF1-215ENST00000487401 PAK3O75914 559 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-215ENST00000487401 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
SREBF1-215ENST00000487401 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
SREBF1-215ENST00000487401 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
SREBF1-215ENST00000487401 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
SREBF1-215ENST00000487401 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
SREBF1-215ENST00000487401 FAM83GA6ND36 823 aa17.94■□□□□ 0.46
SREBF1-215ENST00000487401 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
SREBF1-215ENST00000487401 SLIT2O94813 1529 aa17.93■□□□□ 0.46
SREBF1-215ENST00000487401 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
SREBF1-215ENST00000487401 VPS72Q15906 364 aa17.93■□□□□ 0.46
SREBF1-215ENST00000487401 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
SREBF1-215ENST00000487401 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
SREBF1-215ENST00000487401 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
SREBF1-215ENST00000487401 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
SREBF1-215ENST00000487401 RALGAPBQ86X10 1494 aa17.9■□□□□ 0.46
SREBF1-215ENST00000487401 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-215ENST00000487401 SRPK2P78362 688 aaKnown RBP17.89■□□□□ 0.45
SREBF1-215ENST00000487401 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
SREBF1-215ENST00000487401 CCDC125Q86Z20 511 aa17.89■□□□□ 0.45
SREBF1-215ENST00000487401 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
SREBF1-215ENST00000487401 BTG4Q9NY30 223 aa17.89■□□□□ 0.45
SREBF1-215ENST00000487401 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
SREBF1-215ENST00000487401 ACEP12821 1306 aa17.88■□□□□ 0.45
SREBF1-215ENST00000487401 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
SREBF1-215ENST00000487401 A0A0G2JS52 829 aa17.86■□□□□ 0.45
SREBF1-215ENST00000487401 MYT1Q01538 1121 aa17.86■□□□□ 0.45
SREBF1-215ENST00000487401 PRDM11Q9NQV5 511 aa17.86■□□□□ 0.45
SREBF1-215ENST00000487401 ATP7BP35670 1465 aa17.86■□□□□ 0.45
SREBF1-215ENST00000487401 ONECUT3O60422 494 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms