RNA–Protein interactions for RNA: ENST00000487079.1

POLR2D-204, Transcript of RNA polymerase II subunit D, humanhuman

TSL 2

Gene POLR2D, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2D-204ENST00000487079 ABCC11Q96J66 1382 aa36.53■■■■□ 3.44
POLR2D-204ENST00000487079 PNPLA6Q8IY17 1366 aa36.52■■■■□ 3.44
POLR2D-204ENST00000487079 CDC42BPGQ6DT37 1551 aa36.49■■■■□ 3.43
POLR2D-204ENST00000487079 C14orf93Q9H972 538 aaKnown RBP36.49■■■■□ 3.43
POLR2D-204ENST00000487079 YTHDC2Q9H6S0 1430 aaKnown RBP36.49■■■■□ 3.43
POLR2D-204ENST00000487079 PLEKHH1Q9ULM0 1364 aa36.48■■■■□ 3.43
POLR2D-204ENST00000487079 LAMC1P11047 1609 aa36.48■■■■□ 3.43
POLR2D-204ENST00000487079 ESCO1Q5FWF5 840 aa36.47■■■■□ 3.43
POLR2D-204ENST00000487079 SOS2Q07890 1332 aaPredicted RBP36.47■■■■□ 3.43
POLR2D-204ENST00000487079 KNDC1Q76NI1 1749 aa36.47■■■■□ 3.43
POLR2D-204ENST00000487079 NRXN1Q9ULB1 1477 aa36.46■■■■□ 3.43
POLR2D-204ENST00000487079 CFAP70Q5T0N1 1121 aa36.46■■■■□ 3.43
POLR2D-204ENST00000487079 MYOM2P54296 1465 aa36.45■■■■□ 3.43
POLR2D-204ENST00000487079 NUTM2FA1L443 756 aa36.43■■■■□ 3.42
POLR2D-204ENST00000487079 AFF2P51816 1311 aa36.41■■■■□ 3.42
POLR2D-204ENST00000487079 HRCP23327 699 aa36.41■■■■□ 3.42
POLR2D-204ENST00000487079 DHX57Q6P158 1386 aaKnown RBP36.39■■■■□ 3.42
POLR2D-204ENST00000487079 SIRT1Q96EB6 747 aa36.38■■■■□ 3.41
POLR2D-204ENST00000487079 C8orf37Q96NL8 207 aa36.38■■■■□ 3.41
POLR2D-204ENST00000487079 NPHP3Q7Z494 1330 aa36.37■■■■□ 3.41
POLR2D-204ENST00000487079 FOXO3O43524 673 aa36.35■■■■□ 3.41
POLR2D-204ENST00000487079 ADAMTS2O95450 1211 aa36.35■■■■□ 3.41
POLR2D-204ENST00000487079 RXRBP28702 533 aa36.34■■■■□ 3.41
POLR2D-204ENST00000487079 XPCQ01831 940 aaPredicted RBP36.32■■■■□ 3.4
POLR2D-204ENST00000487079 KDM2AQ9Y2K7 1162 aa36.32■■■■□ 3.4
POLR2D-204ENST00000487079 DCAF11Q8TEB1 546 aa36.3■■■■□ 3.4
POLR2D-204ENST00000487079 FMN2Q9NZ56 1722 aa36.3■■■■□ 3.4
POLR2D-204ENST00000487079 NGLY1Q96IV0 654 aa36.29■■■■□ 3.4
POLR2D-204ENST00000487079 PRAM1Q96QH2 718 aa36.29■■■■□ 3.4
POLR2D-204ENST00000487079 PXDNQ92626 1479 aa36.29■■■■□ 3.4
POLR2D-204ENST00000487079 SAFB2Q14151 953 aaKnown RBP eCLIP36.28■■■■□ 3.4
POLR2D-204ENST00000487079 QTRT2Q9H974 415 aaKnown RBP36.25■■■■□ 3.39
POLR2D-204ENST00000487079 POGKQ9P215 609 aa36.24■■■■□ 3.39
POLR2D-204ENST00000487079 COL22A1Q8NFW1 1626 aaPredicted RBP36.23■■■■□ 3.39
POLR2D-204ENST00000487079 ADGRB1O14514 1584 aa36.21■■■■□ 3.39
POLR2D-204ENST00000487079 DLC1Q96QB1 1528 aa36.2■■■■□ 3.39
POLR2D-204ENST00000487079 TRAK1Q9UPV9 953 aa36.19■■■■□ 3.38
POLR2D-204ENST00000487079 STAC3Q96MF2 364 aa36.18■■■■□ 3.38
POLR2D-204ENST00000487079 CDK12Q9NYV4 1490 aaPredicted RBP36.18■■■■□ 3.38
POLR2D-204ENST00000487079 KIF1AQ12756 1690 aa36.17■■■■□ 3.38
POLR2D-204ENST00000487079 RBM6P78332 1123 aaKnown RBP36.17■■■■□ 3.38
POLR2D-204ENST00000487079 PHF8Q9UPP1 1060 aa36.16■■■■□ 3.38
POLR2D-204ENST00000487079 RGPD8O14715 1765 aaPredicted RBP36.16■■■■□ 3.38
POLR2D-204ENST00000487079 KRT28Q7Z3Y7 464 aa36.15■■■■□ 3.38
POLR2D-204ENST00000487079 USP21Q9UK80 565 aa36.15■■■■□ 3.38
POLR2D-204ENST00000487079 SPATA31A3Q5VYP0 1347 aa36.11■■■■□ 3.37
POLR2D-204ENST00000487079 FNBP4Q8N3X1 1017 aaPredicted RBP36.11■■■■□ 3.37
POLR2D-204ENST00000487079 UPF1Q92900 1129 aaKnown RBP eCLIP36.1■■■■□ 3.371e-13■■■■□ 25.7
POLR2D-204ENST00000487079 HIRIP3Q9BW71 556 aaPredicted RBP36.1■■■■□ 3.37
POLR2D-204ENST00000487079 RGS12O14924 1447 aa36.08■■■■□ 3.37
POLR2D-204ENST00000487079 MINK1Q8N4C8 1332 aaPredicted RBP36.07■■■■□ 3.36
POLR2D-204ENST00000487079 PSME1Q06323 249 aa36.06■■■■□ 3.36
POLR2D-204ENST00000487079 TRPC5Q9UL62 973 aaPredicted RBP36.06■■■■□ 3.36
POLR2D-204ENST00000487079 ADGRB2O60241 1585 aa36.06■■■■□ 3.36
POLR2D-204ENST00000487079 ANKARQ7Z5J8 1434 aa36.04■■■■□ 3.36
POLR2D-204ENST00000487079 PMFBP1Q8TBY8 1022 aa36.04■■■■□ 3.36
POLR2D-204ENST00000487079 MARF1Q9Y4F3 1742 aaKnown RBP36.03■■■■□ 3.36
POLR2D-204ENST00000487079 USP32Q8NFA0 1604 aa36.02■■■■□ 3.36
POLR2D-204ENST00000487079 TNS3Q68CZ2 1445 aa36■■■■□ 3.35
POLR2D-204ENST00000487079 ATRNO75882 1429 aa36■■■■□ 3.35
POLR2D-204ENST00000487079 BCL9LQ86UU0 1499 aa35.98■■■■□ 3.35
POLR2D-204ENST00000487079 WASLO00401 505 aaPredicted RBP35.97■■■■□ 3.35
POLR2D-204ENST00000487079 LMOD2Q6P5Q4 547 aa35.97■■■■□ 3.35
POLR2D-204ENST00000487079 PLEKHG5O94827 1062 aa35.96■■■■□ 3.35
POLR2D-204ENST00000487079 SBNO1A3KN83 1393 aa35.96■■■■□ 3.35
POLR2D-204ENST00000487079 EIF3AQ14152 1382 aaKnown RBP35.95■■■■□ 3.35
POLR2D-204ENST00000487079 PRR36Q9H6K5 1346 aa35.95■■■■□ 3.35
POLR2D-204ENST00000487079 HAP1P54257 671 aaPredicted RBP35.95■■■■□ 3.35
POLR2D-204ENST00000487079 CABLES1Q8TDN4 633 aa35.95■■■■□ 3.35
POLR2D-204ENST00000487079 TULP4Q9NRJ4 1543 aa35.93■■■■□ 3.34
POLR2D-204ENST00000487079 ARHGEF28Q8N1W1 1705 aaKnown RBP35.92■■■■□ 3.34
POLR2D-204ENST00000487079 ARHGEF10O15013 1369 aa35.89■■■■□ 3.34
POLR2D-204ENST00000487079 UNC5CLQ8IV45 518 aa35.88■■■■□ 3.33
POLR2D-204ENST00000487079 GJD4Q96KN9 370 aaPredicted RBP35.87■■■■□ 3.33
POLR2D-204ENST00000487079 SLIT2O94813 1529 aa35.87■■■■□ 3.33
POLR2D-204ENST00000487079 GPRASP1Q5JY77 1395 aa35.87■■■■□ 3.33
POLR2D-204ENST00000487079 KIAA1210Q9ULL0 1709 aa35.86■■■■□ 3.33
POLR2D-204ENST00000487079 NBPF1Q3BBV0 1214 aa35.85■■■■□ 3.33
POLR2D-204ENST00000487079 NGDNQ8NEJ9 315 aaKnown RBP35.84■■■■□ 3.33
POLR2D-204ENST00000487079 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.82■■■■□ 3.32
POLR2D-204ENST00000487079 TRPM3Q9HCF6 1732 aaPredicted RBP35.82■■■■□ 3.32
POLR2D-204ENST00000487079 NUDT16Q96DE0 195 aaKnown RBP35.81■■■■□ 3.32
POLR2D-204ENST00000487079 ATAD2Q6PL18 1390 aa35.8■■■■□ 3.32
POLR2D-204ENST00000487079 CDK19Q9BWU1 502 aa35.8■■■■□ 3.32
POLR2D-204ENST00000487079 ABCA3Q99758 1704 aa35.8■■■■□ 3.32
POLR2D-204ENST00000487079 ATP7BP35670 1465 aa35.78■■■■□ 3.32
POLR2D-204ENST00000487079 RALGAPBQ86X10 1494 aa35.76■■■■□ 3.32
POLR2D-204ENST00000487079 ALS2Q96Q42 1657 aa35.75■■■■□ 3.31
POLR2D-204ENST00000487079 PAK3O75914 559 aaPredicted RBP35.75■■■■□ 3.31
POLR2D-204ENST00000487079 SIN3AQ96ST3 1273 aa35.75■■■■□ 3.31
POLR2D-204ENST00000487079 L3MBTL2Q969R5 705 aa35.74■■■■□ 3.31
POLR2D-204ENST00000487079 ITSN1Q15811 1721 aa35.74■■■■□ 3.31
POLR2D-204ENST00000487079 FAM83GA6ND36 823 aa35.73■■■■□ 3.31
POLR2D-204ENST00000487079 GLI3P10071 1580 aa35.72■■■■□ 3.31
POLR2D-204ENST00000487079 PLCH1Q4KWH8 1693 aa35.72■■■■□ 3.31
POLR2D-204ENST00000487079 VPS72Q15906 364 aa35.7■■■■□ 3.31
POLR2D-204ENST00000487079 NWD2Q9ULI1 1742 aa35.69■■■■□ 3.3
POLR2D-204ENST00000487079 NEUROD1Q13562 356 aa35.68■■■■□ 3.3
POLR2D-204ENST00000487079 CCDC9Q9Y3X0 531 aaKnown RBP35.68■■■■□ 3.3
POLR2D-204ENST00000487079 CCDC61Q9Y6R9 512 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms