RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
U2AF1-211ENST00000486519 PXDNQ92626 1479 aa23.96■■□□□ 1.43
U2AF1-211ENST00000486519 XPCQ01831 940 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-211ENST00000486519 SLIT2O94813 1529 aa23.94■■□□□ 1.42
U2AF1-211ENST00000486519 ROBO2Q9HCK4 1378 aa23.92■■□□□ 1.42
U2AF1-211ENST00000486519 SEPT12Q8IYM1 358 aa23.9■■□□□ 1.42
U2AF1-211ENST00000486519 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.42
U2AF1-211ENST00000486519 SF3B2Q13435 895 aaKnown RBP23.89■■□□□ 1.41
U2AF1-211ENST00000486519 UNC5CLQ8IV45 518 aa23.89■■□□□ 1.41
U2AF1-211ENST00000486519 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
U2AF1-211ENST00000486519 PLCH1Q4KWH8 1693 aa23.85■■□□□ 1.41
U2AF1-211ENST00000486519 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
U2AF1-211ENST00000486519 YY1P25490 414 aa23.83■■□□□ 1.41
U2AF1-211ENST00000486519 R3HDM1Q15032 1099 aaKnown RBP23.83■■□□□ 1.41
U2AF1-211ENST00000486519 FOXO3O43524 673 aa23.82■■□□□ 1.4
U2AF1-211ENST00000486519 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
U2AF1-211ENST00000486519 ESCO1Q5FWF5 840 aa23.81■■□□□ 1.4
U2AF1-211ENST00000486519 NPHP3Q7Z494 1330 aa23.81■■□□□ 1.4
U2AF1-211ENST00000486519 KRT27Q7Z3Y8 459 aa23.8■■□□□ 1.4
U2AF1-211ENST00000486519 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-211ENST00000486519 FAM50AQ14320 339 aaKnown RBP23.79■■□□□ 1.4
U2AF1-211ENST00000486519 TNS1Q9HBL0 1735 aaKnown RBP23.78■■□□□ 1.4
U2AF1-211ENST00000486519 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
U2AF1-211ENST00000486519 RGPD1P0DJD0 1748 aa23.77■■□□□ 1.4
U2AF1-211ENST00000486519 BAG6P46379 1132 aa23.77■■□□□ 1.4
U2AF1-211ENST00000486519 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
U2AF1-211ENST00000486519 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
U2AF1-211ENST00000486519 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
U2AF1-211ENST00000486519 ONECUT3O60422 494 aaPredicted RBP23.75■■□□□ 1.39
U2AF1-211ENST00000486519 NUP155O75694 1391 aa23.75■■□□□ 1.39
U2AF1-211ENST00000486519 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
U2AF1-211ENST00000486519 NUTM2FA1L443 756 aa23.74■■□□□ 1.39
U2AF1-211ENST00000486519 VPS72Q15906 364 aa23.74■■□□□ 1.39
U2AF1-211ENST00000486519 FAM182BQ5T319 152 aa23.74■■□□□ 1.39
U2AF1-211ENST00000486519 SPATA31A3Q5VYP0 1347 aa23.71■■□□□ 1.39
U2AF1-211ENST00000486519 CABLES1Q8TDN4 633 aa23.71■■□□□ 1.39
U2AF1-211ENST00000486519 NRAPQ86VF7 1730 aa23.7■■□□□ 1.39
U2AF1-211ENST00000486519 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
U2AF1-211ENST00000486519 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
U2AF1-211ENST00000486519 CCDC9Q9Y3X0 531 aaKnown RBP23.7■■□□□ 1.38
U2AF1-211ENST00000486519 KIF1BO60333 1816 aa23.7■■□□□ 1.38
U2AF1-211ENST00000486519 EZH2Q15910 746 aaKnown RBP23.67■■□□□ 1.38
U2AF1-211ENST00000486519 RGPD8O14715 1765 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-211ENST00000486519 NAIPQ13075 1403 aa23.67■■□□□ 1.38
U2AF1-211ENST00000486519 CAMTA1Q9Y6Y1 1673 aa23.66■■□□□ 1.38
U2AF1-211ENST00000486519 FAM98CQ17RN3 349 aaKnown RBP23.65■■□□□ 1.38
U2AF1-211ENST00000486519 FMN2Q9NZ56 1722 aa23.64■■□□□ 1.38
U2AF1-211ENST00000486519 A0A0G2JS52 829 aa23.64■■□□□ 1.37
U2AF1-211ENST00000486519 MYT1Q01538 1121 aa23.64■■□□□ 1.37
U2AF1-211ENST00000486519 DISP2A7MBM2 1401 aa23.63■■□□□ 1.37
U2AF1-211ENST00000486519 KIF1AQ12756 1690 aa23.62■■□□□ 1.37
U2AF1-211ENST00000486519 LRPPRCP42704 1394 aaKnown RBP23.61■■□□□ 1.37
U2AF1-211ENST00000486519 PPLO60437 1756 aa23.6■■□□□ 1.37
U2AF1-211ENST00000486519 APLP2Q06481 763 aa23.6■■□□□ 1.37
U2AF1-211ENST00000486519 FAM83GA6ND36 823 aa23.59■■□□□ 1.37
U2AF1-211ENST00000486519 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
U2AF1-211ENST00000486519 NUP188Q5SRE5 1749 aa23.59■■□□□ 1.37
U2AF1-211ENST00000486519 RREB1Q92766 1687 aa23.58■■□□□ 1.37
U2AF1-211ENST00000486519 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
U2AF1-211ENST00000486519 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
U2AF1-211ENST00000486519 KRT28Q7Z3Y7 464 aa23.58■■□□□ 1.37
U2AF1-211ENST00000486519 WAPLQ7Z5K2 1190 aa23.58■■□□□ 1.37
U2AF1-211ENST00000486519 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.36
U2AF1-211ENST00000486519 TNS3Q68CZ2 1445 aa23.58■■□□□ 1.36
U2AF1-211ENST00000486519 CAMKK2Q96RR4 588 aa23.57■■□□□ 1.36
U2AF1-211ENST00000486519 HAP1P54257 671 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-211ENST00000486519 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
U2AF1-211ENST00000486519 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
U2AF1-211ENST00000486519 IFFO2Q5TF58 517 aa23.51■■□□□ 1.35
U2AF1-211ENST00000486519 ADGRB2O60241 1585 aa23.5■■□□□ 1.35
U2AF1-211ENST00000486519 TRIM37O94972 964 aa23.5■■□□□ 1.35
U2AF1-211ENST00000486519 STK26Q9P289 416 aa23.5■■□□□ 1.35
U2AF1-211ENST00000486519 BTG4Q9NY30 223 aa23.49■■□□□ 1.35
U2AF1-211ENST00000486519 KNDC1Q76NI1 1749 aa23.48■■□□□ 1.35
U2AF1-211ENST00000486519 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
U2AF1-211ENST00000486519 LMOD2Q6P5Q4 547 aa23.47■■□□□ 1.35
U2AF1-211ENST00000486519 TECPR2O15040 1411 aa23.47■■□□□ 1.35
U2AF1-211ENST00000486519 SENP3-EIF4A1A0A087X0R7 540 aa23.45■■□□□ 1.34
U2AF1-211ENST00000486519 ITGAEP38570 1179 aa23.45■■□□□ 1.34
U2AF1-211ENST00000486519 ZNF784Q8NCA9 323 aaPredicted RBP23.45■■□□□ 1.34
U2AF1-211ENST00000486519 TRPM3Q9HCF6 1732 aaPredicted RBP23.45■■□□□ 1.34
U2AF1-211ENST00000486519 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
U2AF1-211ENST00000486519 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
U2AF1-211ENST00000486519 SBNO1A3KN83 1393 aa23.43■■□□□ 1.34
U2AF1-211ENST00000486519 CRYBG1Q9Y4K1 1723 aa23.43■■□□□ 1.34
U2AF1-211ENST00000486519 PHF8Q9UPP1 1060 aa23.43■■□□□ 1.34
U2AF1-211ENST00000486519 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
U2AF1-211ENST00000486519 ADGRF5Q8IZF2 1346 aa23.42■■□□□ 1.34
U2AF1-211ENST00000486519 APBA3O96018 575 aa23.42■■□□□ 1.34
U2AF1-211ENST00000486519 NINLQ9Y2I6 1382 aa23.41■■□□□ 1.34
U2AF1-211ENST00000486519 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
U2AF1-211ENST00000486519 ALS2Q96Q42 1657 aa23.41■■□□□ 1.34
U2AF1-211ENST00000486519 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
U2AF1-211ENST00000486519 UTRNP46939 3433 aa23.39■■□□□ 1.34
U2AF1-211ENST00000486519 ARHGEF10O15013 1369 aa23.39■■□□□ 1.33
U2AF1-211ENST00000486519 PSME1Q06323 249 aa23.38■■□□□ 1.33
U2AF1-211ENST00000486519 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
U2AF1-211ENST00000486519 NRKQ7Z2Y5 1582 aa23.37■■□□□ 1.33
U2AF1-211ENST00000486519 KCNQ2O43526 872 aa23.37■■□□□ 1.33
U2AF1-211ENST00000486519 PARD3Q8TEW0 1356 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms