RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
PDZD11-204ENST00000486461 SLIT2O94813 1529 aa9.51□□□□□ -0.89
PDZD11-204ENST00000486461 A0A0G2JS52 829 aa9.5□□□□□ -0.89
PDZD11-204ENST00000486461 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
PDZD11-204ENST00000486461 MYT1Q01538 1121 aa9.5□□□□□ -0.89
PDZD11-204ENST00000486461 CCDC9Q9Y3X0 531 aaKnown RBP9.5□□□□□ -0.89
PDZD11-204ENST00000486461 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
PDZD11-204ENST00000486461 VPS72Q15906 364 aa9.49□□□□□ -0.89
PDZD11-204ENST00000486461 NPHP3Q7Z494 1330 aa9.49□□□□□ -0.89
PDZD11-204ENST00000486461 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
PDZD11-204ENST00000486461 METP08581 1390 aa9.48□□□□□ -0.89
PDZD11-204ENST00000486461 NINLQ9Y2I6 1382 aa9.48□□□□□ -0.89
PDZD11-204ENST00000486461 ABCC5O15440 1437 aa9.48□□□□□ -0.89
PDZD11-204ENST00000486461 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
PDZD11-204ENST00000486461 DISP2A7MBM2 1401 aa9.47□□□□□ -0.89
PDZD11-204ENST00000486461 NRXN3Q9Y4C0 1643 aa9.46□□□□□ -0.89
PDZD11-204ENST00000486461 XPCQ01831 940 aaPredicted RBP9.46□□□□□ -0.9
PDZD11-204ENST00000486461 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
PDZD11-204ENST00000486461 ANKRD30AQ9BXX3 1397 aa9.46□□□□□ -0.9
PDZD11-204ENST00000486461 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
PDZD11-204ENST00000486461 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
PDZD11-204ENST00000486461 PXDNQ92626 1479 aa9.45□□□□□ -0.9
PDZD11-204ENST00000486461 CAMTA1Q9Y6Y1 1673 aa9.45□□□□□ -0.9
PDZD11-204ENST00000486461 FOXO3O43524 673 aa9.44□□□□□ -0.9
PDZD11-204ENST00000486461 HAP1P54257 671 aaPredicted RBP9.44□□□□□ -0.9
PDZD11-204ENST00000486461 CAMKK2Q96RR4 588 aa9.44□□□□□ -0.9
PDZD11-204ENST00000486461 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
PDZD11-204ENST00000486461 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 ADGRL2O95490 1459 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 DAPK1P53355 1430 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 LRPPRCP42704 1394 aaKnown RBP9.43□□□□□ -0.9
PDZD11-204ENST00000486461 KCNQ2O43526 872 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 CHD4Q14839 1912 aa9.43□□□□□ -0.9
PDZD11-204ENST00000486461 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
PDZD11-204ENST00000486461 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
PDZD11-204ENST00000486461 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
PDZD11-204ENST00000486461 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
PDZD11-204ENST00000486461 ADGRB2O60241 1585 aa9.41□□□□□ -0.9
PDZD11-204ENST00000486461 PLCH1Q4KWH8 1693 aa9.41□□□□□ -0.9
PDZD11-204ENST00000486461 SPATA31A3Q5VYP0 1347 aa9.4□□□□□ -0.9
PDZD11-204ENST00000486461 TRIM37O94972 964 aa9.4□□□□□ -0.9
PDZD11-204ENST00000486461 APBA3O96018 575 aa9.4□□□□□ -0.9
PDZD11-204ENST00000486461 ZNF326Q5BKZ1 582 aaKnown RBP9.4□□□□□ -0.9
PDZD11-204ENST00000486461 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
PDZD11-204ENST00000486461 IQGAP3Q86VI3 1631 aa9.39□□□□□ -0.91
PDZD11-204ENST00000486461 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
PDZD11-204ENST00000486461 E9PCH4 1651 aa9.39□□□□□ -0.91
PDZD11-204ENST00000486461 PLEKHG5O94827 1062 aa9.38□□□□□ -0.91
PDZD11-204ENST00000486461 ANKRD50Q9ULJ7 1429 aa9.38□□□□□ -0.91
PDZD11-204ENST00000486461 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
PDZD11-204ENST00000486461 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
PDZD11-204ENST00000486461 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
PDZD11-204ENST00000486461 HFM1A2PYH4 1435 aa9.37□□□□□ -0.91
PDZD11-204ENST00000486461 NUP188Q5SRE5 1749 aa9.36□□□□□ -0.91
PDZD11-204ENST00000486461 RREB1Q92766 1687 aa9.36□□□□□ -0.91
PDZD11-204ENST00000486461 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
PDZD11-204ENST00000486461 NUTM2FA1L443 756 aa9.35□□□□□ -0.91
PDZD11-204ENST00000486461 CCDC144AA2RUR9 1427 aa9.35□□□□□ -0.91
PDZD11-204ENST00000486461 CDC42BPGQ6DT37 1551 aa9.35□□□□□ -0.91
PDZD11-204ENST00000486461 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
PDZD11-204ENST00000486461 BTG4Q9NY30 223 aa9.34□□□□□ -0.91
PDZD11-204ENST00000486461 NRAPQ86VF7 1730 aa9.34□□□□□ -0.92
PDZD11-204ENST00000486461 NRKQ7Z2Y5 1582 aa9.33□□□□□ -0.92
PDZD11-204ENST00000486461 TNS3Q68CZ2 1445 aa9.33□□□□□ -0.92
PDZD11-204ENST00000486461 CEP350Q5VT06 3117 aa9.33□□□□□ -0.92
PDZD11-204ENST00000486461 PSME1Q06323 249 aa9.33□□□□□ -0.92
PDZD11-204ENST00000486461 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
PDZD11-204ENST00000486461 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
PDZD11-204ENST00000486461 SPATA31A5Q5VU36 1347 aa9.32□□□□□ -0.92
PDZD11-204ENST00000486461 SPATA31A7Q8IWB4 1347 aa9.32□□□□□ -0.92
PDZD11-204ENST00000486461 PRAG1Q86YV5 1406 aa9.32□□□□□ -0.92
PDZD11-204ENST00000486461 ABCA3Q99758 1704 aa9.31□□□□□ -0.92
PDZD11-204ENST00000486461 SYT17Q9BSW7 474 aa9.31□□□□□ -0.92
PDZD11-204ENST00000486461 KIF1AQ12756 1690 aa9.31□□□□□ -0.92
PDZD11-204ENST00000486461 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
PDZD11-204ENST00000486461 NAIPQ13075 1403 aa9.31□□□□□ -0.92
PDZD11-204ENST00000486461 ARHGEF10O15013 1369 aa9.3□□□□□ -0.92
PDZD11-204ENST00000486461 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
PDZD11-204ENST00000486461 MYOM1P52179 1685 aa9.29□□□□□ -0.92
PDZD11-204ENST00000486461 ZBTB7AO95365 584 aa9.29□□□□□ -0.92
PDZD11-204ENST00000486461 UTRNP46939 3433 aa9.29□□□□□ -0.92
PDZD11-204ENST00000486461 COL14A1Q05707 1796 aaKnown RBP9.29□□□□□ -0.92
PDZD11-204ENST00000486461 SBNO1A3KN83 1393 aa9.28□□□□□ -0.92
PDZD11-204ENST00000486461 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
PDZD11-204ENST00000486461 PTGER2P43116 358 aa9.28□□□□□ -0.92
PDZD11-204ENST00000486461 PDE3BQ13370 1112 aa9.28□□□□□ -0.92
PDZD11-204ENST00000486461 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
PDZD11-204ENST00000486461 CASZ1Q86V15 1759 aa9.27□□□□□ -0.92
PDZD11-204ENST00000486461 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
PDZD11-204ENST00000486461 VPS8Q8N3P4 1428 aa9.27□□□□□ -0.93
PDZD11-204ENST00000486461 RRBP1Q9P2E9 1410 aaKnown RBP9.27□□□□□ -0.93
PDZD11-204ENST00000486461 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.93
PDZD11-204ENST00000486461 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
PDZD11-204ENST00000486461 NUP155O75694 1391 aa9.26□□□□□ -0.93
PDZD11-204ENST00000486461 GPR162Q16538 588 aa9.26□□□□□ -0.93
PDZD11-204ENST00000486461 PDGFDQ9GZP0 370 aaPredicted RBP9.26□□□□□ -0.93
PDZD11-204ENST00000486461 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms