RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
GABRE-209ENST00000486255 KIF14Q15058 1648 aa10.65□□□□□ -0.7
GABRE-209ENST00000486255 ANKRD45Q5TZF3 282 aa10.65□□□□□ -0.7
GABRE-209ENST00000486255 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
GABRE-209ENST00000486255 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
GABRE-209ENST00000486255 RBM10P98175 930 aaKnown RBP10.65□□□□□ -0.7
GABRE-209ENST00000486255 GGT6Q6P531 493 aa10.65□□□□□ -0.7
GABRE-209ENST00000486255 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.7
GABRE-209ENST00000486255 TSPYL1Q9H0U9 437 aa10.65□□□□□ -0.71
GABRE-209ENST00000486255 ROCK1Q13464 1354 aa10.65□□□□□ -0.71
GABRE-209ENST00000486255 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
GABRE-209ENST00000486255 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
GABRE-209ENST00000486255 MRE11P49959 708 aa10.64□□□□□ -0.71
GABRE-209ENST00000486255 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
GABRE-209ENST00000486255 ARHGAP5Q13017 1502 aa10.64□□□□□ -0.71
GABRE-209ENST00000486255 ANO2Q9NQ90 1003 aa10.64□□□□□ -0.71
GABRE-209ENST00000486255 DAPK1P53355 1430 aa10.63□□□□□ -0.71
GABRE-209ENST00000486255 NASPP49321 788 aaPredicted RBP10.63□□□□□ -0.71
GABRE-209ENST00000486255 MYO6Q9UM54 1294 aa10.63□□□□□ -0.71
GABRE-209ENST00000486255 SKIDA1Q1XH10 827 aa10.63□□□□□ -0.71
GABRE-209ENST00000486255 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
GABRE-209ENST00000486255 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 G3V3G9 751 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 PDILTQ8N807 584 aa10.62□□□□□ -0.71
GABRE-209ENST00000486255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.713e-8■■■■■ 38
GABRE-209ENST00000486255 NUP160Q12769 1436 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 RRP1P56182 461 aaKnown RBP10.61□□□□□ -0.71
GABRE-209ENST00000486255 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 NUCB2P80303 420 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 EXOC6Q8TAG9 804 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 KIAA0754O94854 1291 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
GABRE-209ENST00000486255 LMOD3Q0VAK6 560 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 TCEAL9Q9UHQ7 104 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
GABRE-209ENST00000486255 FAM69CQ0P6D2 419 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 NAT10Q9H0A0 1025 aaKnown RBP10.6□□□□□ -0.71
GABRE-209ENST00000486255 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 KIF15Q9NS87 1388 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 CCP110O43303 1012 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 OLFM4Q6UX06 510 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
GABRE-209ENST00000486255 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
GABRE-209ENST00000486255 EID1Q9Y6B2 187 aa10.6□□□□□ -0.71
GABRE-209ENST00000486255 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
GABRE-209ENST00000486255 STK11IPQ8N1F8 1099 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 REC8O95072 547 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 AXDND1Q5T1B0 1012 aaPredicted RBP10.59□□□□□ -0.71
GABRE-209ENST00000486255 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 STK26Q9P289 416 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 C9orf84Q5VXU9 1444 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 AKNAQ7Z591 1439 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 CAMSAP2Q08AD1 1489 aa10.59□□□□□ -0.71
GABRE-209ENST00000486255 PLIN1O60240 522 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
GABRE-209ENST00000486255 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 SMC3Q9UQE7 1217 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 ITSN2Q9NZM3 1697 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.72
GABRE-209ENST00000486255 CPLX2Q6PUV4 134 aaKnown RBP10.58□□□□□ -0.72
GABRE-209ENST00000486255 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 CCDC73Q6ZRK6 1079 aa10.58□□□□□ -0.72
GABRE-209ENST00000486255 VPS37CA5D8V6 355 aaPredicted RBP10.57□□□□□ -0.72
GABRE-209ENST00000486255 TSPY26PQ9H489 355 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 CCDC144AA2RUR9 1427 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 ZKSCAN1P17029 563 aaPredicted RBP10.57□□□□□ -0.72
GABRE-209ENST00000486255 USP8P40818 1118 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 FOSBP53539 338 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 GOLGA6L7A0A1B0GV03 622 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
GABRE-209ENST00000486255 NUP153P49790 1475 aaKnown RBP10.56□□□□□ -0.72
GABRE-209ENST00000486255 TCOF1Q13428 1488 aaKnown RBP10.56□□□□□ -0.72
GABRE-209ENST00000486255 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
GABRE-209ENST00000486255 HMGN5P82970 282 aaKnown RBP10.56□□□□□ -0.72
GABRE-209ENST00000486255 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 NAIPQ13075 1403 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 CPLX1O14810 134 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 EPS15P42566 896 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 ZKSCAN2Q63HK3 967 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 DEF6Q9H4E7 631 aa10.56□□□□□ -0.72
GABRE-209ENST00000486255 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
GABRE-209ENST00000486255 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
GABRE-209ENST00000486255 UQCRHP07919 91 aa10.55□□□□□ -0.72
GABRE-209ENST00000486255 PPP1R1BQ9UD71 204 aaPredicted RBP10.55□□□□□ -0.72
GABRE-209ENST00000486255 DISP1Q96F81 1524 aa10.55□□□□□ -0.72
GABRE-209ENST00000486255 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
GABRE-209ENST00000486255 GOLGA6L10A6NI86 522 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 SMC2O95347 1197 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 DYDC1Q8WWB3 177 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 CCDC141Q6ZP82 1450 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms