RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
MCF2L-226ENST00000486210 MYOM2P54296 1465 aa26.34■■□□□ 1.81
MCF2L-226ENST00000486210 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
MCF2L-226ENST00000486210 CDC42BPGQ6DT37 1551 aa26.32■■□□□ 1.8
MCF2L-226ENST00000486210 PXDNQ92626 1479 aa26.3■■□□□ 1.8
MCF2L-226ENST00000486210 RPGRIP1LQ68CZ1 1315 aa26.3■■□□□ 1.8
MCF2L-226ENST00000486210 BCL9LQ86UU0 1499 aa26.29■■□□□ 1.8
MCF2L-226ENST00000486210 SRCAPQ6ZRS2 3230 aa26.27■■□□□ 1.8
MCF2L-226ENST00000486210 TRIM26Q12899 539 aaPredicted RBP26.26■■□□□ 1.79
MCF2L-226ENST00000486210 NPHP3Q7Z494 1330 aa26.25■■□□□ 1.79
MCF2L-226ENST00000486210 ESCO1Q5FWF5 840 aa26.25■■□□□ 1.79
MCF2L-226ENST00000486210 EP400Q96L91 3159 aa26.24■■□□□ 1.79
MCF2L-226ENST00000486210 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
MCF2L-226ENST00000486210 XPCQ01831 940 aaPredicted RBP26.22■■□□□ 1.79
MCF2L-226ENST00000486210 FOXO3O43524 673 aa26.21■■□□□ 1.79
MCF2L-226ENST00000486210 ADGRF5Q8IZF2 1346 aa26.19■■□□□ 1.78
MCF2L-226ENST00000486210 SLC4A1APQ9BWU0 796 aaKnown RBP26.19■■□□□ 1.78
MCF2L-226ENST00000486210 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
MCF2L-226ENST00000486210 TECPR2O15040 1411 aa26.18■■□□□ 1.78
MCF2L-226ENST00000486210 KNDC1Q76NI1 1749 aa26.17■■□□□ 1.78
MCF2L-226ENST00000486210 GLI3P10071 1580 aa26.17■■□□□ 1.78
MCF2L-226ENST00000486210 WAPLQ7Z5K2 1190 aa26.17■■□□□ 1.78
MCF2L-226ENST00000486210 GJD4Q96KN9 370 aaPredicted RBP26.17■■□□□ 1.78
MCF2L-226ENST00000486210 ZRANB1Q9UGI0 708 aa26.17■■□□□ 1.78
MCF2L-226ENST00000486210 NUTM2FA1L443 756 aa26.16■■□□□ 1.78
MCF2L-226ENST00000486210 FMN2Q9NZ56 1722 aa26.16■■□□□ 1.78
MCF2L-226ENST00000486210 FOXD1Q16676 465 aa26.15■■□□□ 1.78
MCF2L-226ENST00000486210 PLEKHH1Q9ULM0 1364 aa26.15■■□□□ 1.78
MCF2L-226ENST00000486210 SLIT2O94813 1529 aa26.14■■□□□ 1.78
MCF2L-226ENST00000486210 CCDC125Q86Z20 511 aa26.14■■□□□ 1.78
MCF2L-226ENST00000486210 LRPPRCP42704 1394 aaKnown RBP26.13■■□□□ 1.77
MCF2L-226ENST00000486210 STK26Q9P289 416 aa26.13■■□□□ 1.77
MCF2L-226ENST00000486210 BRWD3Q6RI45 1802 aa26.13■■□□□ 1.77
MCF2L-226ENST00000486210 SPATA31E1Q6ZUB1 1445 aa26.12■■□□□ 1.77
MCF2L-226ENST00000486210 KIF1AQ12756 1690 aa26.12■■□□□ 1.77
MCF2L-226ENST00000486210 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
MCF2L-226ENST00000486210 USP32Q8NFA0 1604 aa26.1■■□□□ 1.77
MCF2L-226ENST00000486210 ABCC11Q96J66 1382 aa26.1■■□□□ 1.77
MCF2L-226ENST00000486210 SPATA31A3Q5VYP0 1347 aa26.1■■□□□ 1.77
MCF2L-226ENST00000486210 RGPD8O14715 1765 aaPredicted RBP26.1■■□□□ 1.77
MCF2L-226ENST00000486210 TMEM132EQ6IEE7 984 aa26.09■■□□□ 1.77
MCF2L-226ENST00000486210 UNC5CLQ8IV45 518 aa26.09■■□□□ 1.77
MCF2L-226ENST00000486210 CCDC144AA2RUR9 1427 aa26.07■■□□□ 1.76
MCF2L-226ENST00000486210 RGL3Q3MIN7 710 aa26.07■■□□□ 1.76
MCF2L-226ENST00000486210 PIK3C2GO75747 1445 aa26.06■■□□□ 1.76
MCF2L-226ENST00000486210 ANKRD30BQ9BXX2 1392 aa26.06■■□□□ 1.76
MCF2L-226ENST00000486210 BLMP54132 1417 aaPredicted RBP26.05■■□□□ 1.76
MCF2L-226ENST00000486210 YTHDC2Q9H6S0 1430 aaKnown RBP26.04■■□□□ 1.76
MCF2L-226ENST00000486210 PLCH1Q4KWH8 1693 aa26.03■■□□□ 1.76
MCF2L-226ENST00000486210 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
MCF2L-226ENST00000486210 KRT28Q7Z3Y7 464 aa26.02■■□□□ 1.76
MCF2L-226ENST00000486210 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
MCF2L-226ENST00000486210 NWD2Q9ULI1 1742 aa26■■□□□ 1.75
MCF2L-226ENST00000486210 TNS3Q68CZ2 1445 aa26■■□□□ 1.75
MCF2L-226ENST00000486210 DEFB132Q7Z7B7 95 aa26■■□□□ 1.75
MCF2L-226ENST00000486210 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
MCF2L-226ENST00000486210 SEPT12Q8IYM1 358 aa25.97■■□□□ 1.75
MCF2L-226ENST00000486210 CABLES1Q8TDN4 633 aa25.97■■□□□ 1.75
MCF2L-226ENST00000486210 VPS72Q15906 364 aa25.96■■□□□ 1.75
MCF2L-226ENST00000486210 SIRT1Q96EB6 747 aa25.96■■□□□ 1.75
MCF2L-226ENST00000486210 MPHOSPH9Q99550 1183 aa25.95■■□□□ 1.74
MCF2L-226ENST00000486210 PHF8Q9UPP1 1060 aa25.95■■□□□ 1.74
MCF2L-226ENST00000486210 NRXN1Q9ULB1 1477 aa25.95■■□□□ 1.74
MCF2L-226ENST00000486210 ONECUT3O60422 494 aaPredicted RBP25.93■■□□□ 1.74
MCF2L-226ENST00000486210 C14orf93Q9H972 538 aaKnown RBP25.92■■□□□ 1.74
MCF2L-226ENST00000486210 SBNO1A3KN83 1393 aa25.92■■□□□ 1.74
MCF2L-226ENST00000486210 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
MCF2L-226ENST00000486210 HAP1P54257 671 aaPredicted RBP25.91■■□□□ 1.74
MCF2L-226ENST00000486210 NRAPQ86VF7 1730 aa25.91■■□□□ 1.74
MCF2L-226ENST00000486210 LRP5O75197 1615 aa25.9■■□□□ 1.74
MCF2L-226ENST00000486210 PSME1Q06323 249 aa25.9■■□□□ 1.74
MCF2L-226ENST00000486210 CFAP70Q5T0N1 1121 aa25.89■■□□□ 1.74
MCF2L-226ENST00000486210 TRPM3Q9HCF6 1732 aaPredicted RBP25.88■■□□□ 1.73
MCF2L-226ENST00000486210 FAM83GA6ND36 823 aa25.87■■□□□ 1.73
MCF2L-226ENST00000486210 HRCP23327 699 aa25.87■■□□□ 1.73
MCF2L-226ENST00000486210 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
MCF2L-226ENST00000486210 KRT27Q7Z3Y8 459 aa25.87■■□□□ 1.73
MCF2L-226ENST00000486210 CCDC9Q9Y3X0 531 aaKnown RBP25.87■■□□□ 1.73
MCF2L-226ENST00000486210 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
MCF2L-226ENST00000486210 ARHGEF10O15013 1369 aa25.86■■□□□ 1.73
MCF2L-226ENST00000486210 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
MCF2L-226ENST00000486210 SAFB2Q14151 953 aaKnown RBP eCLIP25.86■■□□□ 1.73
MCF2L-226ENST00000486210 LMOD2Q6P5Q4 547 aa25.85■■□□□ 1.73
MCF2L-226ENST00000486210 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
MCF2L-226ENST00000486210 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
MCF2L-226ENST00000486210 ALS2Q96Q42 1657 aa25.83■■□□□ 1.73
MCF2L-226ENST00000486210 DLC1Q96QB1 1528 aa25.83■■□□□ 1.73
MCF2L-226ENST00000486210 PMFBP1Q8TBY8 1022 aa25.83■■□□□ 1.73
MCF2L-226ENST00000486210 ANKARQ7Z5J8 1434 aa25.82■■□□□ 1.72
MCF2L-226ENST00000486210 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
MCF2L-226ENST00000486210 COL14A1Q05707 1796 aaKnown RBP25.79■■□□□ 1.72
MCF2L-226ENST00000486210 ADGRB1O14514 1584 aa25.78■■□□□ 1.72
MCF2L-226ENST00000486210 FAM98CQ17RN3 349 aaKnown RBP25.78■■□□□ 1.72
MCF2L-226ENST00000486210 PSDA5PKW4 1024 aaPredicted RBP25.77■■□□□ 1.72
MCF2L-226ENST00000486210 BTG4Q9NY30 223 aa25.77■■□□□ 1.72
MCF2L-226ENST00000486210 RGPD1P0DJD0 1748 aa25.77■■□□□ 1.72
MCF2L-226ENST00000486210 A0A0G2JS52 829 aa25.75■■□□□ 1.71
MCF2L-226ENST00000486210 BAG6P46379 1132 aa25.75■■□□□ 1.71
MCF2L-226ENST00000486210 MYT1Q01538 1121 aa25.75■■□□□ 1.71
MCF2L-226ENST00000486210 POGKQ9P215 609 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms