RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 LRPPRCP42704 1394 aaKnown RBP17.93■□□□□ 0.46
LDLRAP1-206ENST00000485476 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
LDLRAP1-206ENST00000485476 USP21Q9UK80 565 aa17.93■□□□□ 0.46
LDLRAP1-206ENST00000485476 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
LDLRAP1-206ENST00000485476 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
LDLRAP1-206ENST00000485476 TECPR2O15040 1411 aa17.9■□□□□ 0.46
LDLRAP1-206ENST00000485476 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
LDLRAP1-206ENST00000485476 SIRT1Q96EB6 747 aa17.9■□□□□ 0.46
LDLRAP1-206ENST00000485476 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
LDLRAP1-206ENST00000485476 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
LDLRAP1-206ENST00000485476 ATRNO75882 1429 aa17.89■□□□□ 0.45
LDLRAP1-206ENST00000485476 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
LDLRAP1-206ENST00000485476 MYOM2P54296 1465 aa17.88■□□□□ 0.45
LDLRAP1-206ENST00000485476 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
LDLRAP1-206ENST00000485476 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
LDLRAP1-206ENST00000485476 PPLO60437 1756 aa17.84■□□□□ 0.45
LDLRAP1-206ENST00000485476 PXDNQ92626 1479 aa17.84■□□□□ 0.45
LDLRAP1-206ENST00000485476 SPATA31E1Q6ZUB1 1445 aa17.84■□□□□ 0.45
LDLRAP1-206ENST00000485476 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
LDLRAP1-206ENST00000485476 FOXO3O43524 673 aa17.83■□□□□ 0.44
LDLRAP1-206ENST00000485476 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
LDLRAP1-206ENST00000485476 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
LDLRAP1-206ENST00000485476 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
LDLRAP1-206ENST00000485476 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
LDLRAP1-206ENST00000485476 SPATA31A3Q5VYP0 1347 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 STK26Q9P289 416 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
LDLRAP1-206ENST00000485476 PSME1Q06323 249 aa17.78■□□□□ 0.44
LDLRAP1-206ENST00000485476 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
LDLRAP1-206ENST00000485476 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
LDLRAP1-206ENST00000485476 TMEM132EQ6IEE7 984 aa17.75■□□□□ 0.43
LDLRAP1-206ENST00000485476 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
LDLRAP1-206ENST00000485476 SLIT2O94813 1529 aa17.75■□□□□ 0.43
LDLRAP1-206ENST00000485476 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
LDLRAP1-206ENST00000485476 KNDC1Q76NI1 1749 aa17.74■□□□□ 0.43
LDLRAP1-206ENST00000485476 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
LDLRAP1-206ENST00000485476 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
LDLRAP1-206ENST00000485476 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
LDLRAP1-206ENST00000485476 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
LDLRAP1-206ENST00000485476 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
LDLRAP1-206ENST00000485476 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
LDLRAP1-206ENST00000485476 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
LDLRAP1-206ENST00000485476 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
LDLRAP1-206ENST00000485476 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
LDLRAP1-206ENST00000485476 VPS72Q15906 364 aa17.71■□□□□ 0.43
LDLRAP1-206ENST00000485476 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.43
LDLRAP1-206ENST00000485476 RALGAPBQ86X10 1494 aa17.7■□□□□ 0.42
LDLRAP1-206ENST00000485476 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
LDLRAP1-206ENST00000485476 BLMP54132 1417 aaPredicted RBP17.7■□□□□ 0.42
LDLRAP1-206ENST00000485476 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
LDLRAP1-206ENST00000485476 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
LDLRAP1-206ENST00000485476 MARF1Q9Y4F3 1742 aaKnown RBP17.69■□□□□ 0.42
LDLRAP1-206ENST00000485476 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
LDLRAP1-206ENST00000485476 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
LDLRAP1-206ENST00000485476 EP400Q96L91 3159 aa17.69■□□□□ 0.42
LDLRAP1-206ENST00000485476 ANKARQ7Z5J8 1434 aa17.67■□□□□ 0.42
LDLRAP1-206ENST00000485476 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
LDLRAP1-206ENST00000485476 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
LDLRAP1-206ENST00000485476 DLC1Q96QB1 1528 aa17.66■□□□□ 0.42
LDLRAP1-206ENST00000485476 SF3B2Q13435 895 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-206ENST00000485476 SEPT12Q8IYM1 358 aa17.65■□□□□ 0.42
LDLRAP1-206ENST00000485476 PRAM1Q96QH2 718 aa17.65■□□□□ 0.42
LDLRAP1-206ENST00000485476 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-206ENST00000485476 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
LDLRAP1-206ENST00000485476 GLI3P10071 1580 aa17.63■□□□□ 0.41
LDLRAP1-206ENST00000485476 POGKQ9P215 609 aa17.63■□□□□ 0.41
LDLRAP1-206ENST00000485476 KRT27Q7Z3Y8 459 aa17.61■□□□□ 0.41
LDLRAP1-206ENST00000485476 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
LDLRAP1-206ENST00000485476 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
LDLRAP1-206ENST00000485476 GPRASP1Q5JY77 1395 aa17.59■□□□□ 0.41
LDLRAP1-206ENST00000485476 CABLES1Q8TDN4 633 aa17.59■□□□□ 0.41
LDLRAP1-206ENST00000485476 LMOD2Q6P5Q4 547 aa17.58■□□□□ 0.4
LDLRAP1-206ENST00000485476 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
LDLRAP1-206ENST00000485476 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
LDLRAP1-206ENST00000485476 HRCP23327 699 aa17.56■□□□□ 0.4
LDLRAP1-206ENST00000485476 SAFB2Q14151 953 aaKnown RBP eCLIP17.56■□□□□ 0.4
LDLRAP1-206ENST00000485476 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
LDLRAP1-206ENST00000485476 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
LDLRAP1-206ENST00000485476 BAG6P46379 1132 aa17.55■□□□□ 0.4
LDLRAP1-206ENST00000485476 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
LDLRAP1-206ENST00000485476 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
LDLRAP1-206ENST00000485476 BTG4Q9NY30 223 aa17.53■□□□□ 0.4
LDLRAP1-206ENST00000485476 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
LDLRAP1-206ENST00000485476 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.39
LDLRAP1-206ENST00000485476 NGDNQ8NEJ9 315 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-206ENST00000485476 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
LDLRAP1-206ENST00000485476 SPATA31A5Q5VU36 1347 aa17.5■□□□□ 0.39
LDLRAP1-206ENST00000485476 SPATA31A7Q8IWB4 1347 aa17.5■□□□□ 0.39
LDLRAP1-206ENST00000485476 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
LDLRAP1-206ENST00000485476 PLCH1Q4KWH8 1693 aa17.5■□□□□ 0.39
LDLRAP1-206ENST00000485476 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
LDLRAP1-206ENST00000485476 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
LDLRAP1-206ENST00000485476 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
LDLRAP1-206ENST00000485476 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
LDLRAP1-206ENST00000485476 MINK1Q8N4C8 1332 aaPredicted RBP17.48■□□□□ 0.39
LDLRAP1-206ENST00000485476 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
LDLRAP1-206ENST00000485476 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms